CN189046
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL5_RAT (Cullin-5 OS=Rattus norvegicus GN=Cul5 PE=1 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 3.841e-23 Identity = 69/236 (29.24%), Postives = 127/236 (53.81%), Query Frame = 1 Query: 55 SSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQ-QCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFN--TSDRLSYSEIMTQLNLTHDDLVRLLHSL 747 S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++ + +K+ M D+ ++ + +F+E NN+ A P +++ +L G W S + ++LP+E+ + + FY+ RKL W + + I K E +L V+T+Q A L +N +++S+ + L +L R L SL Sbjct: 402 SKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSL 637
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL5_RABIT (Cullin-5 OS=Oryctolagus cuniculus GN=CUL5 PE=2 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 3.841e-23 Identity = 69/236 (29.24%), Postives = 127/236 (53.81%), Query Frame = 1 Query: 55 SSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQ-QCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFN--TSDRLSYSEIMTQLNLTHDDLVRLLHSL 747 S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++ + +K+ M D+ ++ + +F+E NN+ A P +++ +L G W S + ++LP+E+ + + FY+ RKL W + + I K E +L V+T+Q A L +N +++S+ + L +L R L SL Sbjct: 402 SKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSL 637
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL5_MOUSE (Cullin-5 OS=Mus musculus GN=Cul5 PE=1 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 3.841e-23 Identity = 69/236 (29.24%), Postives = 127/236 (53.81%), Query Frame = 1 Query: 55 SSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQ-QCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFN--TSDRLSYSEIMTQLNLTHDDLVRLLHSL 747 S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++ + +K+ M D+ ++ + +F+E NN+ A P +++ +L G W S + ++LP+E+ + + FY+ RKL W + + I K E +L V+T+Q A L +N +++S+ + L +L R L SL Sbjct: 402 SKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSL 637
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL5_HUMAN (Cullin-5 OS=Homo sapiens GN=CUL5 PE=1 SV=4) HSP 1 Score: 108.612 bits (270), Expect = 3.841e-23 Identity = 69/236 (29.24%), Postives = 127/236 (53.81%), Query Frame = 1 Query: 55 SSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQ-QCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFN--TSDRLSYSEIMTQLNLTHDDLVRLLHSL 747 S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++ + +K+ M D+ ++ + +F+E NN+ A P +++ +L G W S + ++LP+E+ + + FY+ RKL W + + I K E +L V+T+Q A L +N +++S+ + L +L R L SL Sbjct: 402 SKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSL 637
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL5_CAEEL (Cullin-5 OS=Caenorhabditis elegans GN=cul-5 PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 3.841e-23 Identity = 75/240 (31.25%), Postives = 128/240 (53.33%), Query Frame = 1 Query: 55 SSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCG--GQFTSKMEGMVTDLTLARENQTSFEEYLS-NNQNAHPGIDLSVTVLTTGFWPSYKSSDL--NLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQ-CNINGKFEQKNIELIVSTYQAATLLLFN--TSDRLSYSEIMTQLNLTHDDLVRLLHSL 747 S +ELLA +CD +L+K ++KL+ E I+E L +V+ +L Y+ +KD+F F+R L+RRL+ + SA+ + E ++TKL+ +CG +K+ M+ D+ L ++ +SF++ L+ N N +++ VL G W S + +LP E+ V + FY+ + RKL W++ + G +L +T+Q A L FN D++S + L +L R L SL Sbjct: 382 SKCAELLANYCDLLLRKTQLSKKLTSEEIDEKLNQVLLVLKYVENKDVFMRFHRAHLSRRLILEMSADQEKEEMMVTKLR-ECGMPSDAVNKLSRMLQDIELNKDMNSSFKKALTGTNNNKSIADSINMKVLNGGAWGRGGSERIRFSLPRELEDFVPEMEAFYKKQHNGRKLCWMHHWSSGTMVFGTANGGRFDLECTTFQMAVLFCFNDRAHDKISLETLRLATELPDAELNRTLLSL 620
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL5_PONAB (Cullin-5 OS=Pongo abelii GN=CUL5 PE=2 SV=3) HSP 1 Score: 108.227 bits (269), Expect = 5.016e-23 Identity = 69/236 (29.24%), Postives = 127/236 (53.81%), Query Frame = 1 Query: 55 SSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQ-QCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFN--TSDRLSYSEIMTQLNLTHDDLVRLLHSL 747 S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++ + +K+ M D+ ++ + +F+E NN+ A P +++ +L G W S + ++LP+E+ + + FY+ RKL W + + I K E +L V+T+Q A L +N +++S+ + L +L R L SL Sbjct: 402 SKCPELLAIYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSL 637
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CDC53_YEAST (Cell division control protein 53 OS=Saccharomyces cerevisiae GN=CDC53 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.330e-20 Identity = 74/254 (29.13%), Postives = 120/254 (47.24%), Query Frame = 1 Query: 1 AEALKEAFEIFCN-----KPVGG-----SSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPG--IDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNIN---GKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLT 714 A+AL A F N P G S +SE+LA + D +LKK +++ + +E ++ + Y++DKD F YR+ A+RL+ S + + E +I+ +L+ ++T K+ M D+ L++ + F L N + DL VL WP SY+ + LP E+V E K Y K R L W++ L + + GK + V+ +Q A LLL+N +D L+ I +LT Sbjct: 405 AKALDNACGAFININEFALPAGSPKSATSKTSEMLAKYSDILLKKATKPEVASDMSDED---IITIFKYLTDKDAFETHYRRLFAKRLIHGTSTSAEDEENIIQRLQAANSMEYTGKITKMFQDIRLSKILEDDFAVALKNEPDYSKAKYPDLQPFVLAENMWPFSYQEVEFKLPKELVPSHEKLKESYSQKHNGRILKWLWPLCRGELKADIGKPGRMPFNFTVTLFQMAILLLYNDADVLTLENIQEGTSLT 655
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: ANC2_MOUSE (Anaphase-promoting complex subunit 2 OS=Mus musculus GN=Anapc2 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.813e-11 Identity = 47/177 (26.55%), Postives = 79/177 (44.63%), Query Frame = 1 Query: 166 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARE-NQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEI 693 L++ KDLF YR LA RLL S + + E + LK + G E M+ D+ +R N EE P + +L++ FWP +K L +P ++ ++V+ YE R L+W ++LG ++ + + + + V+ QA LL F + E+ Sbjct: 520 LVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVMLKDMADSRRINANIREEDEKRPVEEQPPFGVYAVILSSEFWPPFKDEKLEVPEDIRAALDVYCKKYEKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQALVLLYFQNQASWTLEEL 696 The following BLAST results are available for this feature:
BLAST of CN189046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189046 ID=CN189046; Name=CN189046; organism=Citrus sinensis; type=EST; length=762bpback to top |