CN182415

Overview
NameCN182415
Unique NameCN182415
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: M3K13_HUMAN (Mitogen-activated protein kinase kinase kinase 13 OS=Homo sapiens GN=MAP3K13 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.505e-23
Identity = 49/152 (32.24%), Postives = 87/152 (57.24%), Query Frame = -3
Query:  292 LARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAVNTN 747
            +A G++YLH  KI+HRD+K+ N+L+     +KI+DFG ++ E  +        GT+ +MAPEV+  +P + K D++SFG+ LWE+   ++PY D+  + +   V   +L   +P  CP     +M++ W + P  RP   + +  L+  + +
Sbjct:  263 IASGMNYLHLHKIIHRDLKSPNVLVTHTDAVKISDFGTSK-ELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKILMKQTWQSKPRNRPSFRQTLMHLDIASAD 413          
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: VGFR1_CHICK (Vascular endothelial growth factor receptor 1 OS=Gallus gallus GN=FLT1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.496e-23
Identity = 61/169 (36.09%), Postives = 92/169 (54.44%), Query Frame = -3
Query:  271 ALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCD-MPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVK----LLEAVNTNKGGGMIP 756
            +  +ARG+ +L S+K +HRD+   N+LL  N  +KI DFG+AR   +NP  +        L +MAPE +  K YN K DV+S+G+ LWEI+     PYP +   +   + +++  R   P      +  IM  CW +NP++RP   E+VK    LL+A    +G   IP
Sbjct:  996 SFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDARLPLKWMAPESIFDKIYNTKSDVWSYGVLLWEIFSLGASPYPGVQIDEDFCSKLKEGTRMRAPEQATEEIYQIMLDCWRSNPNERPWFSELVKRLGDLLQASVQQEGKDYIP 1164          
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: P2C31_ARATH (Protein kinase and PP2C-like domain-containing protein OS=Arabidopsis thaliana GN=At2g40860/At2g40870 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.496e-23
Identity = 72/186 (38.71%), Postives = 98/186 (52.69%), Query Frame = -3
Query:  301 IALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVA-------RVEAQNPRDMTGET---------GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPD------------LSFTD--VSSAVVRQNLRP---DIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 759
            I L LA+ L YLH+  IVHRDVK  N+LLD      +ADFG+A        V  QN R     T         GTL YMAPE+L    Y  K D+YSFGI + E+    +PY D            +++T+  ++ A+V   LRP   +I    P SL S+++ CW+++P KRP  D VV  LE++
Sbjct:  129 ITLHLAKALQYLHNNGIVHRDVKPANVLLDEKFFPYLADFGLAEYKKNLREVNLQNWRSSGKPTGGFHKKNMVGTLIYMAPEILRKDMYTEKADIYSFGILINELLTGVVPYTDRRAEAQAHTVLEMNYTEQQLTVAIVSSGLRPALAEIGLHLPKSLLSLIQNCWESDPSKRPSSDNVVLELESI 314          
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: FGFR4_MOUSE (Fibroblast growth factor receptor 4 OS=Mus musculus GN=Fgfr4 PE=1 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 8.496e-23
Identity = 60/155 (38.71%), Postives = 89/155 (57.42%), Query Frame = -3
Query:  301 ALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC-DMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 756
            A  +ARG+ YL S+K +HRD+   N+L+  +  +KIADFG+AR             G L   +MAPE L  + Y  + DV+SF I LWEI+     PYP +   ++ S ++R+  R + P  CPS L  +MR+CW A P +RP   ++V+ L+ V
Sbjct:  590 AYQVARGMQYLESRKCIHRDLAARNVLVTEDDVMKIADFGLARGVHHIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFEILLWEIFTLGGSPYPGIPVEELFS-LLREGHRMERPPNCPSELYGLMRECWHAAPSQRPTFKQLVEALDKV 743          
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: FER_CANFA (Proto-oncogene tyrosine-protein kinase Fer OS=Canis familiaris GN=FER PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.496e-23
Identity = 59/154 (38.31%), Postives = 85/154 (55.19%), Query Frame = -3
Query:  301 ALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTG-ETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 756
            +LD A G+SYL SK  +HRD+   N L+  N  LKI+DFG++R E       +G +   + + APE L+   Y+ + DV+SFGI LWE +   + PYP ++    +  V R   R   P+ CP  +  IM KCWD  P+ RP   E+ K L  +
Sbjct:  665 SLDAASGMSYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWETFSLGVCPYPGMTNQQATEQVER-GYRISAPQHCPEDIFKIMMKCWDYKPENRPKFSELQKELTVI 817          
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: TNI3K_MOUSE (Serine/threonine-protein kinase TNNI3K OS=Mus musculus GN=Tnni3k PE=2 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 1.110e-22
Identity = 62/193 (32.12%), Postives = 106/193 (54.92%), Query Frame = -3
Query:  223 IALDLARGLSYLHS--KKIVHRDVKTENMLLDANRTLKIADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLE----------AVNTNKGGGMIPEGQAHGCLCFIPTRGP 759
            IA+D+A+G+ YLHS  + I+HRD+ + N+LL  +    +ADFG +R +++ +  +MT + G L +MAPEV      Y  K DV+S+ +CLWE+   ++P+  L     ++ +   ++RP I    P  ++S++ + W+A P+ RP   EVV+ LE            ++N  G + P   +    C +   GP
Sbjct:  565 IAVDVAKGMEYLHSLTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRYTIKADVFSYALCLWELLIGEIPFAHLKPAAAAADMAYHHIRPPIGYSIPKPISSLLMRGWNACPEGRPEFSEVVRKLEECLCNVELMSPASSNSSGSLSPSSSSD---CLLSRGGP 754          
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: MET_RHIFE (Hepatocyte growth factor receptor OS=Rhinolophus ferrumequinum GN=MET PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.110e-22
Identity = 60/156 (38.46%), Postives = 88/156 (56.41%), Query Frame = -3
Query:  301 LDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVAR----VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 753
            L +A+G+ YL SKK VHRD+   N +LD N T+K+ADFG+AR     E  +  + TG    + +MA E L  + +  K DV+SFG+ LWE+      PYPD++  D+ +  + Q  R   P  CP  L  +M KCW    ++RP   E+V  + A+
Sbjct: 1186 LQVAKGMKYLASKKFVHRDLAARNCMLDENFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-TVYLLQGRRLLQPEYCPDHLYEVMLKCWHPKAEQRPSFAELVSRISAI 1340          
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: MET_OTOGA (Hepatocyte growth factor receptor OS=Otolemur garnettii GN=MET PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.110e-22
Identity = 60/156 (38.46%), Postives = 87/156 (55.77%), Query Frame = -3
Query:  301 LDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVAR----VEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDM-PYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 753
            L +A+G+ YL SKK VHRD+   N +LD N T+K+ADFG+AR     E  +  + TG    + +MA E L  + +  K DV+SFG+ LWE+      PYPD++  D+ +  + Q  R   P  CP  L  +M KCW    + RP   E+V  + A+
Sbjct: 1187 LQVAKGMKYLASKKFVHRDLAARNCMLDENFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-TVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 1341          
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: M3K11_RAT (Mitogen-activated protein kinase kinase kinase 11 OS=Rattus norvegicus GN=Map3k11 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.110e-22
Identity = 60/163 (36.81%), Postives = 91/163 (55.83%), Query Frame = -3
Query:  301 ALDLARGLSYLHSKKIV---HRDVKTENMLL--------DANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 756
            A+ +ARG+ YLH + +V   HRD+K+ N+LL          ++TLKI DFG+AR E      M+   GT  +MAPEV+    +++  DV+SFG+ LWE+   ++PY  +    V+  V    L   IP  CP   A +M  CW  +P +RP    +++ LEA+
Sbjct:  220 AVQIARGMHYLHCEALVPVIHRDLKSNNILLLQPIEGDDMEHKTLKITDFGLAR-EWHKTTQMSA-AGTYAWMAPEVIKASTFSKGSDVWSFGVLLWELLTGEVPYRGIDCLAVAYGVAVNKLTLPIPSTCPEPFAQLMADCWAQDPHRRPDFASILQQLEAL 380          
BLAST of CN182415 vs. ExPASy Swiss-Prot
Match: M3K11_MOUSE (Mitogen-activated protein kinase kinase kinase 11 OS=Mus musculus GN=Map3k11 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.110e-22
Identity = 60/163 (36.81%), Postives = 91/163 (55.83%), Query Frame = -3
Query:  301 ALDLARGLSYLHSKKIV---HRDVKTENMLL--------DANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFTDVSSAVVRQNLRPDIPRCCPSSLASIMRKCWDANPDKRPVMDEVVKLLEAV 756
            A+ +ARG+ YLH + +V   HRD+K+ N+LL          ++TLKI DFG+AR E      M+   GT  +MAPEV+    +++  DV+SFG+ LWE+   ++PY  +    V+  V    L   IP  CP   A +M  CW  +P +RP    +++ LEA+
Sbjct:  220 AVQIARGMHYLHCEALVPVIHRDLKSNNILLLQPIEGDDMEHKTLKITDFGLAR-EWHKTTQMSA-AGTYAWMAPEVIKASTFSKGSDVWSFGVLLWELLTGEVPYRGIDCLAVAYGVAVNKLTLPIPSTCPEPFAQLMADCWAQDPHRRPDFASILQQLEAL 380          
The following BLAST results are available for this feature:
BLAST of CN182415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
M3K13_HUMAN6.505e-2332.24Mitogen-activated protein kinase kinase kinase 13 ... [more]
VGFR1_CHICK8.496e-2336.09Vascular endothelial growth factor receptor 1 OS=G... [more]
P2C31_ARATH8.496e-2338.71Protein kinase and PP2C-like domain-containing pro... [more]
FGFR4_MOUSE8.496e-2338.71Fibroblast growth factor receptor 4 OS=Mus musculu... [more]
FER_CANFA8.496e-2338.31Proto-oncogene tyrosine-protein kinase Fer OS=Cani... [more]
TNI3K_MOUSE1.110e-2232.12Serine/threonine-protein kinase TNNI3K OS=Mus musc... [more]
MET_RHIFE1.110e-2238.46Hepatocyte growth factor receptor OS=Rhinolophus f... [more]
MET_OTOGA1.110e-2238.46Hepatocyte growth factor receptor OS=Otolemur garn... [more]
M3K11_RAT1.110e-2236.81Mitogen-activated protein kinase kinase kinase 11 ... [more]
M3K11_MOUSE1.110e-2236.81Mitogen-activated protein kinase kinase kinase 11 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002G17_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182415 ID=CN182415; Name=CN182415; organism=Citrus sinensis; type=EST; length=761bp
GAGGGTTTGGAATTGAATAAAACTTCAGACCACGAAAATAATTGCACAAA
TCGAAAGCGTAGCTTCAATACATTTGAAAACACGGTGGACATCAAATAGG
ACTGCAGAAACGTATGAACTCAGTATCAATAAACACAGCTGCAGGCGCGG
TAATAATTAATAAACTGCTCTGATTCTTTCATCCGCACAGATGAGTGGTA
AAATGGAAAATAAAAAGAATCAAGGGCCCCGAGTTGGGATGAAACATAGA
CAGCCATGTGCTTGACCTTCAGGTATCATTCCACCCCCCTTGTTTGTATT
CACTGCTTCCAGGAGCTTCACTACCTCGTCCATAACAGGGCGTTTATCCG
GGTTTGCATCCCAACATTTTCTCATGATGCTTGCCAGTGAACTTGGGCAA
CATCTTGGGATATCTGGTCGTAAATTCTGTCGAACAACTGCAGATGAAAC
ATCTGTGAAACTAAGATCGGGATAAGGCATATCGCAGCAGTAGATTTCCC
ATAGGCATATCCCAAAGCTATAGACATCGCATTTCCTATTGTAAGGCTTC
CCATCCAGTACCTCTGGGGCCATGTACCCAAGAGTTCCTGTTTCCCCAGT
CATGTCCCTTGGATTCTGAGCTTCAACTCGAGCAACACCAAAATCAGCAA
TTTTCAAAGTTCTGTTAGCATCTAGCAACATGTTTTCTGTCTTAACATCA
CGATGTACAATCTTTTTTGAGTGAAGATAGCTCAATCCTCTAGCAAGATC
CAAAGCAATTT
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