CN189039

Overview
NameCN189039
Unique NameCN189039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_ECOL6 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli O6 GN=gpmI PE=3 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.655e-22
Identity = 74/194 (38.14%), Postives = 106/194 (54.64%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            + +V+LDG+G  +  + N I  A TP MD+   + P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D+ +     + +          +     +H++GLLS GGVHS  D +  +++ A+ERGA++I LH   DGRD    S+   ++  E+  A L GKG   ++AS  GR Y  MDR
Sbjct:    8 MVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPHT--LIDASGLEVGLP-DRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGAVDKAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAESSLKKFEEKFAAL-GKG---RVASIIGR-YYAMDR 193          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_ECOL5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=gpmI PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.655e-22
Identity = 74/194 (38.14%), Postives = 106/194 (54.64%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            + +V+LDG+G  +  + N I  A TP MD+   + P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D+ +     + +          +     +H++GLLS GGVHS  D +  +++ A+ERGA++I LH   DGRD    S+   ++  E+  A L GKG   ++AS  GR Y  MDR
Sbjct:    8 MVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPHT--LIDASGLEVGLP-DRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGAVDKAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAESSLKKFEEKFAAL-GKG---RVASIIGR-YYAMDR 193          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_ECOK1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli O1:K1 / APEC GN=gpmI PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.655e-22
Identity = 74/194 (38.14%), Postives = 106/194 (54.64%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            + +V+LDG+G  +  + N I  A TP MD+   + P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D+ +     + +          +     +H++GLLS GGVHS  D +  +++ A+ERGA++I LH   DGRD    S+   ++  E+  A L GKG   ++AS  GR Y  MDR
Sbjct:    8 MVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPHT--LIDASGLEVGLP-DRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGAVDKAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAESSLKKFEEKFAAL-GKG---RVASIIGR-YYAMDR 193          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_ECOHS (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli O9:H4 (strain HS) GN=gpmI PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.655e-22
Identity = 74/194 (38.14%), Postives = 106/194 (54.64%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            + +V+LDG+G  +  + N I  A TP MD+   + P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D+ +     + +          +     +H++GLLS GGVHS  D +  +++ A+ERGA++I LH   DGRD    S+   ++  E+  A L GKG   ++AS  GR Y  MDR
Sbjct:    8 MVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPHT--LIDASGLEVGLP-DRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGAVDKAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAESSLKKFEEKFAAL-GKG---RVASIIGR-YYAMDR 193          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_ECO57 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli O157:H7 GN=gpmI PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.655e-22
Identity = 74/194 (38.14%), Postives = 106/194 (54.64%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            + +V+LDG+G  +  + N I  A TP MD+   + P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D+ +     + +          +     +H++GLLS GGVHS  D +  +++ A+ERGA++I LH   DGRD    S+   ++  E+  A L GKG   ++AS  GR Y  MDR
Sbjct:    8 MVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPHT--LIDASGLEVGLP-DRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGAVDKAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAESSLKKFEEKFAAL-GKG---RVASIIGR-YYAMDR 193          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_ECO24 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=gpmI PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.655e-22
Identity = 74/194 (38.14%), Postives = 106/194 (54.64%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            + +V+LDG+G  +  + N I  A TP MD+   + P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D+ +     + +          +     +H++GLLS GGVHS  D +  +++ A+ERGA++I LH   DGRD    S+   ++  E+  A L GKG   ++AS  GR Y  MDR
Sbjct:    8 MVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPHT--LIDASGLEVGLP-DRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGAVDKAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAESSLKKFEEKFAAL-GKG---RVASIIGR-YYAMDR 193          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_STRCO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Streptomyces coelicolor GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.774e-22
Identity = 69/192 (35.94%), Postives = 100/192 (52.08%), Query Frame = 1
Query:  130 VVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            ++VLDGWG       N + +A TP +D      P    L  A G AVGL     +GNSE+GH  +GAGR     + LV  A+ SG +      + +  + +  +G LHLIGL SDG +H+ ++ L  LL  A+    +R+ +H +TDGRDV D +   ++  +    AEL       QIA+  GR Y  MD+
Sbjct:   14 LLVLDGWGSADAADDNALSLARTPVLDELVAQHPST--LAEASGEAVGL-LPGTVGNSEIGHMVIGAGRPLPYDSLLVQQAIDSGALRSHPRLDAVLNEVAATSGALHLIGLCSDGQIHAHVEHLSELLAAAATHQVERVFIHAITDGRDVADHTGEAYLTRV----AELAAAAGTGQIATVIGRGY-AMDK 197          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_PSEHT (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.774e-22
Identity = 72/194 (37.11%), Postives = 103/194 (53.09%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF--NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            + +++LDGWG  + ++ N I  A+TP +D    + P    L+ A G  VGLP +  MGNSEVGH  LGAGR+  Q    +  A+  G+         N  K       +H++GLLS GGVHS  D +   ++ A++RGAK +  H   DGRD    S+   +E IE   A+L+      ++AS  GR Y  MDR
Sbjct:    8 LVLMILDGWGYREDEQSNAILAANTPVLDELWATRPRT--LISASGFDVGLP-DGQMGNSEVGHVNLGAGRVVYQDFTRITKAINDGEFDSTPALVDNIDKAVSADKAVHIMGLLSPGGVHSHEDHIVASIELAAKRGAKEVYFHGFLDGRDTPPRSAKASIERIEAVFAKLQ----CGRLASLIGR-YYAMDR 193          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_DINSH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Dinoroseobacter shibae (strain DFL 12) GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.774e-22
Identity = 72/194 (37.11%), Postives = 96/194 (49.48%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            V + +LDGWG       N   +ADTP MD    + P     L   G  VGLP+   MGNSEVGH  +GAGR+ A     +DLA+  G   ++          ++  GT HL+G+ SDGGVH   D +    K  +  G   + LH +TDGRDV   S+  F+  +E  L E       A+I +  GR Y  MDR
Sbjct:    7 VVLCILDGWGLDPDGPANAPLLADTPVMDRLMATCPNA--TLTTFGPDVGLPS-GQMGNSEVGHTNIGAGRVVAMDLGQIDLAIEDGSFARNPALTGFIDRLKSSGGTAHLMGVASDGGVHGHTDHIIAAAKAVAGAGVP-VVLHAITDGRDVAPKSADRFMPALEAALPE------GARIGTVIGR-YYAMDR 189          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_CLOPE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium perfringens GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.774e-22
Identity = 73/194 (37.63%), Postives = 106/194 (54.64%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            V +++LDG+G     + N +  A+ P  D      P     L+A G  VGLP E  MGNSEVGH  +GAGRI  Q    +   +  G  + ++     +  + E  T LHL+GLLS+GGVHS +D L+ LL+ A ++G +++ +H   DGRDV   S   F+  +E  + E+   GV  +IA+  GR Y  MDR
Sbjct:    6 VMLMILDGFGISPNKEGNAVAAANKPNYDRLFNKYPHTE--LQASGLEVGLP-EGQMGNSEVGHLNIGAGRIIYQELTRITKEIKEGTFFTNKALVKAMDEAKENNTSLHLMGLLSNGGVHSHIDHLKGLLELAKKKGLQKVYVHAFMDGRDVAPSSGKDFIVELENAMKEI---GV-GEIATISGR-YYAMDR 191          
The following BLAST results are available for this feature:
BLAST of CN189039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GPMI_ECOL63.655e-2238.142,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ECOL53.655e-2238.142,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ECOK13.655e-2238.142,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ECOHS3.655e-2238.142,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ECO573.655e-2238.142,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ECO243.655e-2238.142,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STRCO4.774e-2235.942,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEHT4.774e-2237.112,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_DINSH4.774e-2237.112,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOPE4.774e-2237.632,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001D14_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001D14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189039 ID=CN189039; Name=CN189039; organism=Citrus sinensis; type=EST; length=699bp
CCGCTTGTTTGTTTGTTAGCTTTCTACGGACGCGCGATTCCCCTTCAATC
CAAAACTAATTAAGAGTGAAAGATGGATAACTGGAAATTAAAAGAGCATC
CACAGCTGTCGAGGAATAACATTGTAGCCGTTGTGGTGTTGGATGGCTGG
GGCGAGTTCAAGCCCGACAAGTATAACTGCATCCATGTCGCCGACACTCC
CACCATGGACTCTTTCAAGAAGTCTGCCCCTGGGAGGTGGAGGTTGCTCC
GAGCTCACGGTAGTGCTGTGGGGCTTCCAACTGAAGATGACATGGGTAAC
AGTGAAGTCGGTCATAATGCACTCGGTGCTGGTCGCATTTTTGCTCAAGG
TGCAAAGCTTGTTGACCTTGCTCTGGCCTCTGGGAAAATCTATCAAGATG
AGGGATTTAATTACATTAAGCCATCTTTTGAAACCGGCACATTGCACCTT
ATTGGGTTACTGAGTGATGGTGGAGTACACTCTAGGCTTGATCAACTTCA
GTTGTTGCTAAAAGGAGCTAGTGAGCGTGGTGCTAAAAGAATTCGTCTTC
ATATTCTTACTGACGGGCGTGATGTTTTGGATGGTTCAAGCGTAGGATTC
GTAGAAACTATTGAGAAAGATCTTGCAGAATTGCGTGGGAAAGGTGTTGA
CGCGCAGATTGCATCTGGAGGAGGCCGCCTGTACGTCACGATGGACCGT
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