CN189039

Overview
NameCN189039
Unique NameCN189039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_SHEB9 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella baltica (strain OS195) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20
Identity = 70/194 (36.08%), Postives = 103/194 (53.09%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            +A+++LDGWG  +    N I  A+TP +D      P    L+   G  VGLP +  MGNSEVGH  LG+GR+  Q    +  A+A  +  Q+    + +  + + G  +H++GLLS GGVHS  + ++ + + A  RGA ++ LH   DGRD    S+   +   + DL    G G   +IAS  GR Y  MDR
Sbjct:    8 LALLILDGWGYRENTHNNAIFHANTPVLDRLNAQYPHS--LISGSGLDVGLP-DGQMGNSEVGHINLGSGRVVYQELTRISKAIADHEFEQNPALCDAVDSAIKAGGAVHIMGLLSPGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPRSAKSSLSHFD-DLFTTLGHG---RIASIIGR-YFAMDR 193          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_MYCHP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma hominis (strain ATCC 23114 / IFO 14850 / NCTC 10111 / PG21) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20
Identity = 73/194 (37.63%), Postives = 102/194 (52.58%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            + + ++DG G  K  + N    A  P  D      P    +L+A G  VGLP E  +GNSEVGH  +GAGR+   G  L++ A+ +     +E  N +  K      TLH++GLLS+GGVHS    L  +LK A  +G K + +H+  DGRDV   S    +ET+ KDL +  G     +I+S  GR Y  MDR
Sbjct:    4 IILTIIDGLGLRKERQGNAYLQAKHPCFDYLFSMCPNS--VLQASGQYVGLP-EGQIGNSEVGHLNIGAGRVVYTGLSLINKAIENNTFKDNEILNDVIDKTIKNNTTLHVMGLLSNGGVHSLDLHLFEILKLAHSKGLKNVSVHVFGDGRDVKPQSIKNSLETL-KDLCQKFG----YKISSISGRFY-AMDR 188          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_CAMJE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Campylobacter jejuni GN=gpmI PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20
Identity = 69/190 (36.32%), Postives = 101/190 (53.16%), Query Frame = 1
Query:  130 VVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            +++ DG G  K  K+N    A  P+ +   K  P    LL+  G AVGLP E  MGNSEVGH  +G+GRI  Q    ++ A+ + ++ ++E  N  K   +   +H+IGL SDGGVHS     + +L+  ++ G   +  H +TDGRDV   S + F+    KDL E   + +    A+  GR Y  MDR
Sbjct:    7 LIITDGIGYNKNSKFNAFEAAKKPSYEKLFKEVPNS--LLKTSGLAVGLP-EGQMGNSEVGHMCIGSGRIIYQNLVRINKAIENKELEKNE--NLKKLLAKCKRVHIIGLYSDGGVHSMDTHFKAMLEICAKNG-NEVFAHAITDGRDVSPKSGLNFI----KDLKEF-CENLGVHFATLCGRFY-AMDR 184          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_CAMJ8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20
Identity = 69/190 (36.32%), Postives = 101/190 (53.16%), Query Frame = 1
Query:  130 VVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            +++ DG G  K  K+N    A  P+ +   K  P    LL+  G AVGLP E  MGNSEVGH  +G+GRI  Q    ++ A+ + ++ ++E  N  K   +   +H+IGL SDGGVHS     + +L+  ++ G   +  H +TDGRDV   S + F+    KDL E   + +    A+  GR Y  MDR
Sbjct:    7 LIITDGIGYNKNSKFNAFEAAKKPSYEKLFKEVPNS--LLKTSGLAVGLP-EGQMGNSEVGHMCIGSGRIIYQNLVRINKAIENKELEKNE--NLQKLLAKCKRVHIIGLYSDGGVHSMDTHFKAMLEICAKNG-NEVFAHAITDGRDVSPKSGLNFI----KDLKEF-CENLGVHFATLCGRFY-AMDR 184          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_ANAPZ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Anaplasma phagocytophilum (strain HZ) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20
Identity = 69/200 (34.50%), Postives = 114/200 (57.00%), Query Frame = 1
Query:  106 LSRNNIVAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD-EGFNYIKP-SFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            +S +N+V + +LDGWG     +Y+ IH A TP  D+     P     L A G+ VGLP+   +GNSEVGH ++G GRI  Q   L+ + L   +++++ +  ++++    + G  H+IGLLSDGGVHS    ++ +++  +  G K + +H++ DGRDV   S+  ++  +   +  L     +A+IA+  GR Y  MDR
Sbjct:    1 MSGSNVV-LCILDGWGNGSGGRYDAIHAAYTPFWDTAVSCCP--MSSLSASGTDVGLPS-GQVGNSEVGHISIGCGRIVLQ--DLLRINLEINEVHKNPKLLDFVRDIQAKGGVCHMIGLLSDGGVHSLQAHMETIIEVITGFGIK-VFIHVILDGRDVPPRSAEKYIGMLNAKIEHL-----NAEIATVAGR-YYAMDR 187          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_SHEB5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.421e-20
Identity = 70/194 (36.08%), Postives = 103/194 (53.09%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            +A+++LDGWG  +    N I  A+TP +D      P    L+   G  VGLP +  MGNSEVGH  LG+GR+  Q    +  A+A  +  Q+    + +  + + G  +H++GLLS GGVHS  + ++ + + A  RGA ++ LH   DGRD    S+   +   + DL    G G   +IAS  GR Y  MDR
Sbjct:    8 LALLILDGWGYRENTHNNAIFHANTPVLDRLNAQYPHS--LISGSGLDVGLP-DGQMGNSEVGHINLGSGRVVYQELTRISKAIADHEFEQNPALCDAVDSAIKAGGAVHIMGLLSAGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPRSAKSSLSHFD-DLFTTLGHG---RIASIIGR-YFAMDR 193          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_MYCPE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma penetrans GN=gpmI PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.421e-20
Identity = 72/196 (36.73%), Postives = 103/196 (52.55%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD----EGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            V + VLDG+G  K  K N I  A TP MD+  K     +  + A G  VGLP +  +GNSEVGH  +GAGRI   G  L++  + + K   +    E  N+ K +     +H++GLLS GGVHS    +  +++  SE G K + +H+  DGRDV   S +  +E +   L +  G      IA+  GR Y +MDR
Sbjct:    6 VLLAVLDGYGFSKDTKGNAILNAKTPFMDNLVKEYDHCY--IEASGEYVGLP-DGQIGNSEVGHLTIGAGRIVYTGLSLINQDIKTKKFDSNKTLLEAINHAKKN--NSNIHIMGLLSPGGVHSNEQHIFEMIRIVSENGLKPV-IHVFGDGRDVAPQSIISSLERLNDVLKKYPG-----TIATISGRFY-SMDR 189          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_HALMA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Haloarcula marismortui GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.421e-20
Identity = 77/207 (37.20%), Postives = 104/207 (50.24%), Query Frame = 1
Query:  130 VVVLDGWGEFKPDK--YNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGK-------IYQDEGF---NYIKPSFET-----GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            +++LDGWG   PD    + +  ADTP  D ++ +  G    L  HG  VGLP E  MGNSEVGH  +GAGR+  Q +  V  ++A  +         QD  F     I  +FE      G +H +GL+SDGGVHS  D L  L++ A ERG   +  H  TDGRD        ++  +E  + E  G G    +A+  GR Y  MDR
Sbjct:    5 LIILDGWG-LNPDDDVRDAVAAADTPNFDRYRDA--GAASTLTTHGRRVGLP-EGQMGNSEVGHLNIGAGRVVKQDSARVSDSIARSRGEAPPDDDAQDPPFFENETILSAFEHAEAHGGRVHFMGLVSDGGVHSYQDHLHALIELAGERGTDAVS-HAFTDGRDTSPTGGEDYLADLEAHVEE-HGTG---HVATVCGR-YYAMDR 201          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_GEOSL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Geobacter sulfurreducens GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.421e-20
Identity = 67/194 (34.54%), Postives = 97/194 (50.00%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            + +++LDGWG       N + +  TP MD      P     +   G AVGLP +  MGNSEVGH  +GAGR+  Q    +  ++  G  + +          +   G LHL GLLSDGGVHS    L  L++ A  +G K + +H   DGRD    S  G++  +E ++  + G G   ++A+  GR Y  MDR
Sbjct:    5 LVLMILDGWGINPDPSNNAVAIGRTPAMDRLMAEYPSVE--METSGMAVGLP-DGQMGNSEVGHLNIGAGRVVYQDLTRITKSIDDGDFFTNPVLLDCMARVKAAGGRLHLGGLLSDGGVHSHNTHLYALIELARRQGVKDVFVHAFLDGRDTPPSSGAGYLAELEAEIGRI-GFG---RVATVMGR-YWAMDR 190          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_CAMJJ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.421e-20
Identity = 69/190 (36.32%), Postives = 101/190 (53.16%), Query Frame = 1
Query:  130 VVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            +++ DG G  K  K+N    A  P+ +   K  P    LL+  G AVGLP E  MGNSEVGH  +G+GRI  Q    ++ A+ + ++ ++E  N  K   +   +H+IGL SDGGVHS     + +L+  ++ G   +  H +TDGRDV   S + F+    KDL E   + +    A+  GR Y  MDR
Sbjct:    7 LIITDGIGYNKNSKFNAFEAAKKPSYEKLFKEVPNS--LLKTSGLAVGLP-EGQMGNSEVGHMCIGSGRIIYQNLVRINKAIENKELEKNE--NLQKLLAKCKRVHIIGLYSDGGVHSMDTHFKAMLEICAKNG-NEVFAHAITDGRDVNPKSGLNFI----KDLKEF-CENLGVHFATLCGRFY-AMDR 184          
The following BLAST results are available for this feature:
BLAST of CN189039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GPMI_SHEB92.620e-2036.082,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCHP2.620e-2037.632,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CAMJE2.620e-2036.322,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CAMJ82.620e-2036.322,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ANAPZ2.620e-2034.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEB53.421e-2036.082,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCPE3.421e-2036.732,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HALMA3.421e-2037.202,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GEOSL3.421e-2034.542,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CAMJJ3.421e-2036.322,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001D14_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001D14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189039 ID=CN189039; Name=CN189039; organism=Citrus sinensis; type=EST; length=699bp
CCGCTTGTTTGTTTGTTAGCTTTCTACGGACGCGCGATTCCCCTTCAATC
CAAAACTAATTAAGAGTGAAAGATGGATAACTGGAAATTAAAAGAGCATC
CACAGCTGTCGAGGAATAACATTGTAGCCGTTGTGGTGTTGGATGGCTGG
GGCGAGTTCAAGCCCGACAAGTATAACTGCATCCATGTCGCCGACACTCC
CACCATGGACTCTTTCAAGAAGTCTGCCCCTGGGAGGTGGAGGTTGCTCC
GAGCTCACGGTAGTGCTGTGGGGCTTCCAACTGAAGATGACATGGGTAAC
AGTGAAGTCGGTCATAATGCACTCGGTGCTGGTCGCATTTTTGCTCAAGG
TGCAAAGCTTGTTGACCTTGCTCTGGCCTCTGGGAAAATCTATCAAGATG
AGGGATTTAATTACATTAAGCCATCTTTTGAAACCGGCACATTGCACCTT
ATTGGGTTACTGAGTGATGGTGGAGTACACTCTAGGCTTGATCAACTTCA
GTTGTTGCTAAAAGGAGCTAGTGAGCGTGGTGCTAAAAGAATTCGTCTTC
ATATTCTTACTGACGGGCGTGATGTTTTGGATGGTTCAAGCGTAGGATTC
GTAGAAACTATTGAGAAAGATCTTGCAGAATTGCGTGGGAAAGGTGTTGA
CGCGCAGATTGCATCTGGAGGAGGCCGCCTGTACGTCACGATGGACCGT
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