CN189039

Overview
NameCN189039
Unique NameCN189039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_MYCMO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma mobile GN=gpmI PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.532e-25
Identity = 76/196 (38.78%), Postives = 105/196 (53.57%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDE----GFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            V + V+DG G  +  + N   +A TP  D      P    +++A G  VGLP +D MGNSEVGH  +GAG+I   G  L++  +   K  Q+      FN +K + ET TLHL+GLLSDGGVHS  + L  L++ A E G K + +H+  DGRDV   S +  ++ +E        K  +  I S  GR Y  MDR
Sbjct:    5 VILSVIDGLGLREEKQGNAFKLAKTPNFDKLFNEYPNS--VIQASGDYVGLP-DDQMGNSEVGHLNIGAGQIVYTGLSLINKDIKDNKFKQNAKFIAAFNAVKKNNETNTLHLMGLLSDGGVHSHEEHLFKLIEAAHENGLKNVSVHVFGDGRDVAPRSILTSIKKLEAIT-----KKYNYAIGSIMGRFY-AMDR 191          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_GEOTN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=gpmI PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.532e-25
Identity = 79/197 (40.10%), Postives = 116/197 (58.88%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF----NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            VA+++LDG+   +    N +  A+ P  D +    P     L+A G AVGLP E  MGNSEVGH  +GAGRI  Q    V++A+  G+  ++E F    N++K   + GT LHL GLLSDGGVHS +  L  LL+ A++ G KR+ +H   DGRDV   ++  +++ +++ + E    GV  +IA+  GR Y +MDR
Sbjct:    6 VALIILDGFALREETYGNAVAQANKPNFDRYWNEYPHA--TLKACGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRVNIAIREGEFDRNETFLAAMNHVK---QHGTSLHLFGLLSDGGVHSHIHHLYALLRLAAKEGVKRVYIHGFLDGRDVGPQTAPQYIKELQEKIKEY---GV-GEIATLSGR-YYSMDR 191          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_BACHD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus halodurans GN=gpmI PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.532e-25
Identity = 76/196 (38.78%), Postives = 113/196 (57.65%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF----NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            VA+++LDG+      K N +  A+ P  D +    P    LL+A G AVGLP E  MGNSEVGH  +GAGRI  Q    V+L++  G+ +++E F    N++K   +  +LH+ GL+SDGG+HS ++ L  LL+ A     +R+ +H   DGRDV   S+  ++  +E  + EL   GV  ++A+  GR Y  MDR
Sbjct:    6 VALIILDGFAMRDEAKGNAVAQANKPNFDRYWNQYPHA--LLKADGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRVNLSIREGEFFENETFLNAMNHVKE--KGSSLHIYGLVSDGGIHSHINHLYALLELAKREQVERVYIHGFLDGRDVGPTSAESYLVDLEAKMKEL---GV-GELATLHGR-YYAMDR 191          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_VIBFM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio fischeri (strain MJ11) GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.613e-25
Identity = 77/200 (38.50%), Postives = 114/200 (57.00%), Query Frame = 1
Query:  106 LSRNNIVAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            +S    +A+V+LDG+G  +    N I  A+TP +D    + P    L+ A G  VGLP +  MGNSEVGH  +GAGR+  Q    +  A++ G+  Q+E   N I  + + G  +H++GL+S GGVHS  D +   ++ A+ RGA++I LH   DGRD    S+   ++  ++  A+L GKG   +IAS  GR Y  MDR
Sbjct:    1 MSAKKPMALVILDGYGHRETQADNAITNANTPVLDGLMANQPNT--LISASGMDVGLP-DGQMGNSEVGHTNIGAGRVVYQDLTRITKAISDGEFQQNETLVNAIDKAVKAGKAVHIMGLMSPGGVHSHEDHIYAAVEMAAARGAEKIYLHCFLDGRDTPPRSAENSLKNFQELFAKL-GKG---RIASLVGR-YYAMDR 192          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_VIBF1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.613e-25
Identity = 77/200 (38.50%), Postives = 114/200 (57.00%), Query Frame = 1
Query:  106 LSRNNIVAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            +S    +A+V+LDG+G  +    N I  A+TP +D    + P    L+ A G  VGLP +  MGNSEVGH  +GAGR+  Q    +  A++ G+  Q+E   N I  + + G  +H++GL+S GGVHS  D +   ++ A+ RGA++I LH   DGRD    S+   ++  ++  A+L GKG   +IAS  GR Y  MDR
Sbjct:    1 MSAKKPMALVILDGYGHRETQADNAITNANTPVLDGLMANQPNT--LISASGMDVGLP-DGQMGNSEVGHTNIGAGRVVYQDLTRITKAISDGEFQQNETLVNAIDKAVKAGKAVHIMGLMSPGGVHSHEDHIYAAVEMAAARGAEKIYLHCFLDGRDTPPRSAENSLKNFQELFAKL-GKG---RIASLVGR-YYAMDR 192          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_VESOH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.613e-25
Identity = 75/202 (37.13%), Postives = 109/202 (53.96%), Query Frame = 1
Query:  109 SRNNIVAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGT-----LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            S+     +++LDGWG  K  K N I +A+T   D   ++ P    L+   G  VGLP +  MGNSEVGH  LGAGRI  Q    +   L +G  +++     ++ S E        +H++GLLSDGGVHS  +Q+  +L+  S +G K + LHI TDGRD    S+  +++ +E  + EL       +I S  GR Y +MDR
Sbjct:    3 SKKQTKLLLILDGWGYSKTTKNNAIALANTSVWDRLNQTFPHS--LIHTSGKDVGLPGKQ-MGNSEVGHLNLGAGRIVKQDFTRIYNELQNGDFFRNP---ILRNSLEYANDNNKAIHIMGLLSDGGVHSHEEQIHAMLEMTSRQGCKNVYLHIFTDGRDCAQKSAKKYIKKLESKMKELN----TGEIVSLIGR-YFSMDR 193          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_SYNJA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus sp. (strain JA-3-3Ab) GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.613e-25
Identity = 81/196 (41.33%), Postives = 110/196 (56.12%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD----EGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            V +V+LDGWG  +  + N +  A TP +DS   + P    LL+A G AVGLP+   MGNSEVGH  LGAGR+  Q    +  A+ +G ++ +    E  + +K   + G  H IGL S+GGVHS +D L  LLK A++ G     +H +TDGRD L       +  +EK+L  L G GV   IA+  GR Y  MDR
Sbjct:    9 VVLVILDGWGYREAPEGNAVLAARTPVVDSLWATYPHT--LLQASGRAVGLPS-GQMGNSEVGHLTLGAGRVVPQELVRISDAIETGSLFHEPLLVEVCHRLKE--QGGRFHFIGLCSEGGVHSHIDHLYGLLKLAAQAGIPAY-VHAITDGRDTLPRDGARVLAALEKELQWL-GSGV---IATLSGR-YYAMDR 193          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_COXBU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Coxiella burnetii GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.613e-25
Identity = 79/194 (40.72%), Postives = 108/194 (55.67%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            + +++LDG+GE     +N I  A+TPT+D   +  P    LL A G AVGLP +  MGNSEVGH  +G GR   Q    +D A+ASG+ Y++        K       +H++GLLS GGVHSR +Q+  L++ A   G K+I LH + DGRD    S++  +E I  D     G G   +IAS  GR Y  MDR
Sbjct:   12 MVLIILDGFGESDETTHNAIKEANTPTLDKLFRHYPHT--LLEASGRAVGLP-DGQMGNSEVGHLHIGGGRKVPQDLTRIDAAIASGEFYENPALIEALEKAKALNKAVHILGLLSPGGVHSRDNQIAALVELAHRCGIKKIYLHAILDGRDTPPKSALLSIEKI-TDQFHAYGNG---KIASLIGR-YYAMDR 197          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_COXBR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.613e-25
Identity = 79/194 (40.72%), Postives = 108/194 (55.67%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            + +++LDG+GE     +N I  A+TPT+D   +  P    LL A G AVGLP +  MGNSEVGH  +G GR   Q    +D A+ASG+ Y++        K       +H++GLLS GGVHSR +Q+  L++ A   G K+I LH + DGRD    S++  +E I  D     G G   +IAS  GR Y  MDR
Sbjct:   12 MVLIILDGFGESDETTHNAIKEANTPTLDKLFRHYPHT--LLEASGRAVGLP-DGQMGNSEVGHLHIGGGRKVPQDLTRIDAAIASGEFYENPALIEALEKAKALNKAVHILGLLSPGGVHSRDNQIAALVELAHHCGIKKIYLHAILDGRDTPPKSALLSIEKI-TDQFHAYGNG---KIASLIGR-YYAMDR 197          
BLAST of CN189039 vs. ExPASy Swiss-Prot
Match: GPMI_COXBN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.613e-25
Identity = 79/194 (40.72%), Postives = 108/194 (55.67%), Query Frame = 1
Query:  124 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRLYVTMDR 699
            + +++LDG+GE     +N I  A+TPT+D   +  P    LL A G AVGLP +  MGNSEVGH  +G GR   Q    +D A+ASG+ Y++        K       +H++GLLS GGVHSR +Q+  L++ A   G K+I LH + DGRD    S++  +E I  D     G G   +IAS  GR Y  MDR
Sbjct:   12 MVLIILDGFGESDETTHNAIKEANTPTLDKLFRHYPHT--LLEASGRAVGLP-DGQMGNSEVGHLHIGGGRKVPQDLTRIDAAIASGEFYENPALIEALEKAKALNKAVHILGLLSPGGVHSRDNQIAALVELAHRCGIKKIYLHAILDGRDTPPKSALLSIEKI-TDQFHAYGNG---KIASLIGR-YYAMDR 197          
The following BLAST results are available for this feature:
BLAST of CN189039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GPMI_MYCMO3.532e-2538.782,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GEOTN3.532e-2540.102,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACHD3.532e-2538.782,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBFM4.613e-2538.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBF14.613e-2538.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VESOH4.613e-2537.132,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNJA4.613e-2541.332,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_COXBU4.613e-2540.722,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_COXBR4.613e-2540.722,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_COXBN4.613e-2540.722,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001D14_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001D14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189039 ID=CN189039; Name=CN189039; organism=Citrus sinensis; type=EST; length=699bp
CCGCTTGTTTGTTTGTTAGCTTTCTACGGACGCGCGATTCCCCTTCAATC
CAAAACTAATTAAGAGTGAAAGATGGATAACTGGAAATTAAAAGAGCATC
CACAGCTGTCGAGGAATAACATTGTAGCCGTTGTGGTGTTGGATGGCTGG
GGCGAGTTCAAGCCCGACAAGTATAACTGCATCCATGTCGCCGACACTCC
CACCATGGACTCTTTCAAGAAGTCTGCCCCTGGGAGGTGGAGGTTGCTCC
GAGCTCACGGTAGTGCTGTGGGGCTTCCAACTGAAGATGACATGGGTAAC
AGTGAAGTCGGTCATAATGCACTCGGTGCTGGTCGCATTTTTGCTCAAGG
TGCAAAGCTTGTTGACCTTGCTCTGGCCTCTGGGAAAATCTATCAAGATG
AGGGATTTAATTACATTAAGCCATCTTTTGAAACCGGCACATTGCACCTT
ATTGGGTTACTGAGTGATGGTGGAGTACACTCTAGGCTTGATCAACTTCA
GTTGTTGCTAAAAGGAGCTAGTGAGCGTGGTGCTAAAAGAATTCGTCTTC
ATATTCTTACTGACGGGCGTGATGTTTTGGATGGTTCAAGCGTAGGATTC
GTAGAAACTATTGAGAAAGATCTTGCAGAATTGCGTGGGAAAGGTGTTGA
CGCGCAGATTGCATCTGGAGGAGGCCGCCTGTACGTCACGATGGACCGT
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