CN182412
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182412 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17 Identity = 53/161 (32.92%), Postives = 83/161 (51.55%), Query Frame = -2 Query: 215 RNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEETVELIDSNPAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAINKISDAWKRLNKECLCPNPFSASFTRASLNLARMVPLMYSYDD 697 +NA L +++LVEAKW + P EE+ N + + G + + F +G +T ET + S+P II ++ I R DD+ K +++ D S I YM+E+ + A+EA + AWK LN+E L P SLNLAR++ ++Y D Sbjct: 372 KNAMIRLAQSYLVEAKWTLQNYKPSFEEFKANALPTCGYAMLAITSFVGMGDIVTPETFKWAASDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVT-AQEAYDVFNKHVESAWKDLNQEFLKPTEMPTEVLNRSLNLARVMDVLYREGD 531
BLAST of CN182412 vs. ExPASy Swiss-Prot
Match: MYRS1_ARATH (Myrcene/ocimene synthase 1, chloroplastic OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.616e-17 Identity = 54/182 (29.67%), Postives = 91/182 (50.00%), Query Frame = -2 Query: 167 LRNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEETVELIDSNPA-IISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAINK-ISDAWKRLNKECLCPNP--FSASFTRASLNLARMVPLMYSYDDNQRLPSLEHFIKSLLS 700 L+ +WT + KA+LVEAKW+ SGH P EEY++N S VH + + ++ + +E + + ++ ++++ RL +DL ++ DE G I YM E A+E+ +S + + I+D W +N E + + F +NLARM MY Y D P + ++S Sbjct: 403 LKKSWTDVSKAYLVEAKWYKSGHKPNLEEYMQNARISISSPTIFVHFYCVFSDQLSIQVLETLSQHQQNVVRCSSSVFRLANDLVTSPDELARGDVCKSIQCYMSE--TGASEDKARSHVRQMINDLWDEMNYEKMAHSSSILHHDFMETVINLARMSQCMYQYGDGHGSPEKAKIVDRVMS 582
BLAST of CN182412 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17 Identity = 53/161 (32.92%), Postives = 82/161 (50.93%), Query Frame = -2 Query: 215 RNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEETVELIDSNPAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAINKISDAWKRLNKECLCPNPFSASFTRASLNLARMVPLMYSYDD 697 + A L +A+L+EAKW + P EE+ N + +SG + + F +G IT ET + S+P II ++ I R DD+ K ++ D S I YMK++ + A+EA I +WK +N+E L P SLNLAR++ ++Y D Sbjct: 373 KKAMIRLVQAYLLEAKWTHQNYKPTFEEFRDNALPTSGYAMLAITAFVGMGEVITPETFKWAASDPKIIKASTIICRFMDDIAEHKFNHRREDDCSAIECYMKQYGVT-AQEAYNEFNKHIESSWKDVNEEFLKPTEMPTPVLCRSLNLARVMDVLYREGD 532
BLAST of CN182412 vs. ExPASy Swiss-Prot
Match: DCS2_GOSAR ((+)-delta-cadinene synthase isozyme XC14 OS=Gossypium arboreum PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17 Identity = 51/161 (31.68%), Postives = 83/161 (51.55%), Query Frame = -2 Query: 215 RNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEETVELIDSNPAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAINKISDAWKRLNKECLCPNPFSASFTRASLNLARMVPLMYSYDD 697 +NA L +++LVEA+W + P EE+ N + + G + + F +G +T ET + ++P II ++ I R DD+ K +++ D S I YM+E+ + A+EA + AWK +NKE L P SLNLAR++ ++Y D Sbjct: 372 KNAMIRLAQSYLVEARWTLQNYKPSFEEFKANALPTCGYAMLAITSFVGMGDIVTPETFKWAANDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVT-AQEAYDVFNKHVESAWKDVNKEFLKPTEMPTEVLNRSLNLARVMDVLYREGD 531
BLAST of CN182412 vs. ExPASy Swiss-Prot
Match: TPSDB_ABIGR (Limonene/alpha-pinene synthase, chloroplastic OS=Abies grandis GN=ag11 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16 Identity = 61/182 (33.52%), Postives = 92/182 (50.55%), Query Frame = -2 Query: 158 LRNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEETVELIDSNPAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAINKISDAWKRLNKECLCPNPFS-ASFTRASLNLARMVPLMYSYDDNQRLPSLEHFIKSLLSESV 700 +RNA+ S +F+ EAKW +SG++P EEYLKNG SSG A + L + ++ ID +++LRL D K + G++ S I YMK+H S E+A ISDA + LN E L P+ S S + + ++ R +Y Y D + S E K+L+ ++V Sbjct: 452 IRNAYESHFDSFMHEAKWISSGYLPTFEEYLKNGKVSSGSRTATLQPILTLDVPLPNYILQEIDYPSRFNDLASSLLRLRGDTRCYKADRARGEEASAISCYMKDHPGSTEEDALNHINVMISDAIRELNWELLRPDSKSPISSKKHAFDITRAFHHLYKYRDGYTVASSE--TKNLVMKTV 631
BLAST of CN182412 vs. ExPASy Swiss-Prot
Match: TPSDA_ABIGR (Limonene synthase, chloroplastic OS=Abies grandis GN=ag10 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 59/182 (32.42%), Postives = 92/182 (50.55%), Query Frame = -2 Query: 158 LRNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEETVELIDSNPAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAINKISDAWKRLNKECLCPNPFS-ASFTRASLNLARMVPLMYSYDDNQRLPSLEHFIKSLLSESV 700 ++NAW +L F+ EAKW +S ++P EEYLKN SSG +A + L + + ++ ID ++ILRL D K + G++ S I YMK+H S E+A ISDA + LN E L P+ S S + + ++ R +Y Y D + + E K+L+ ++V Sbjct: 452 IQNAWEALFDTFMQEAKWISSSYLPTFEEYLKNAKVSSGSRIATLQPILTLDVPLPDYILQEIDYPSRFNELASSILRLRGDTRCYKADRARGEEASAISCYMKDHPGSIEEDALNHINAMISDAIRELNWELLRPDSKSPISSKKHAFDITRAFHHVYKYRDGYTVSNNE--TKNLVMKTV 631
BLAST of CN182412 vs. ExPASy Swiss-Prot
Match: DCS4_GOSAR ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum GN=CAD1-C2 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16 Identity = 50/161 (31.06%), Postives = 82/161 (50.93%), Query Frame = -2 Query: 215 RNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEETVELIDSNPAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAINKISDAWKRLNKECLCPNPFSASFTRASLNLARMVPLMYSYDD 697 +NA L +++LVEA+W + P EE+ N + + G + + F +G +T ET + ++P II ++ I R DD+ K +++ D S I YM+E+ S A+EA + AWK +N+E P SLNLAR++ ++Y D Sbjct: 372 KNAMIRLAQSYLVEARWTLQNYKPSFEEFKANALPTCGYAMLAITSFVGMGDIVTPETFKWAANDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVS-AQEAYDVFNKHVESAWKDVNQEFQKPTEMPTEVLNRSLNLARVMDVLYREGD 531
BLAST of CN182412 vs. ExPASy Swiss-Prot
Match: SSS_SALOF ((+)-sabinene synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16 Identity = 51/159 (32.08%), Postives = 80/159 (50.31%), Query Frame = -2 Query: 227 LRNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEETVELIDSNPAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAINKISDAWKRLNKECLCPN-PFSASFTRASLNLARMVPLMY 700 L+ +W SL + +L EA W+ +G+ P EEYL N S + ++F L + I E +E + I+ + TILRL DDLG+++ E + G I YM + ++ EA + I +AWK +N + PF+ A+ NLAR +Y Sbjct: 407 LQRSWVSLVEGYLKEAYWYYNGYKPSLEEYLNNAKISISAPTIISQLYFTLANSIDETAIESLYQYHNILYLSGTILRLADDLGTSQHELERGDVPKAIQCYMNDTN-ASEREAVEHVKFLIREAWKEMNTVTTASDCPFTDDLVAAAANLARAAQFIY 564
BLAST of CN182412 vs. ExPASy Swiss-Prot
Match: HUMS_ARATH (Alpha-humulene/(-)-(E)-beta-caryophyllene synthase OS=Arabidopsis thaliana GN=TPS21 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 56/184 (30.43%), Postives = 91/184 (49.46%), Query Frame = -2 Query: 155 LRNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEETVELIDSNPAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAINKISDAWKRLNKECLCPNPFSASFTRASLNLARMVPLMYSYDDNQRLPSL--EHFIKSLLSESVP 700 L+ + ++ EAKW ++ +EY +N I SSG + + F + + E + S+P I ++ I R DD+ S + E++ + I YM++ S E A + N +SDAWK LN+E + P+ F LNL+R++ + Y Y D P L EH + SLL E++P Sbjct: 365 LKKSLQKTANGYMQEAKWLKKDYIATFDEYKENAILSSGYYALIAMTFVRMTDVAKLDAFEWLSSHPKIRVASEIISRFTDDISSYEFEHKREHVATGIDCYMQQFGVS-KERAVEVMGNIVSDAWKDLNQELMRPHVFPFPLLMRVLNLSRVIDVFYRYQDAYTNPKLLKEHIV-SLLIETIP 546
BLAST of CN182412 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 54/185 (29.19%), Postives = 89/185 (48.11%), Query Frame = -2 Query: 158 RNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEET----VELIDSNPAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAINKISDAWKRLNKECLCPNPFSASFTRASLNLARMVPLMYSYDDNQR-LPSLEHFIKSLLSESV 697 R A+ L + + +EA W G +P ++YL NG ++G+ + F G+ E T + +++NP + ++ +RL +DL S E Q G S I YM +H S +EA K +D WK +N+EC+ + S +NLAR+ + Y Y D L+ F+K L + + Sbjct: 420 REAFQELVRGYYLEAVWRDEGKIPSFDDYLYNGSMTTGLPLVSTASFM----GVQEITGLNEFQWLETNPKLSYASGAFIRLVNDLTSHVTEQQRGHVASCIDCYMNQHGVSK-DEAVKILQKMATDCWKEINEECMRQSQVSVGHLMRIVNLARLTDVSYKYGDGYTDSQQLKQFVKGLFVDPI 599 The following BLAST results are available for this feature:
BLAST of CN182412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182412 ID=CN182412; Name=CN182412; organism=Citrus sinensis; type=EST; length=707bpback to top |