CN182404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_PYRAE (V-type ATP synthase beta chain OS=Pyrobaculum aerophilum GN=atpB PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.052e-26 Identity = 57/137 (41.61%), Postives = 85/137 (62.04%), Query Frame = -2 Query: 386 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSR 796 GYITEGQ+ ++ + + IYPP +V+ SLSRL K AIGEG TR DH DV+N L A Y+ +++ + +VGE L + YL F D FE++F+ QG Y+ R+ ++LD+ W +L I P + L + ++Y R Sbjct: 323 GYITEGQLVLSRAMWGKGIYPPFDVIMSLSRLAKDAIGEGKTREDHKDVANTLIAAYSKALEIRNLATLVGERNLGWRERRYLRFADAFEQRFIKQGYYERRSFEETLDIGWDVLSILPEDELTNARPQITQKFYRR 459
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_ANADE (V-type ATP synthase beta chain OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=atpB PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.160e-25 Identity = 68/140 (48.57%), Postives = 83/140 (59.29%), Query Frame = -2 Query: 377 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRDAA 796 GYITEGQI ++ L R +YPPI+VLPSLSRLM G G TR DH V++QLYA YA G+DV+ M A+VG L E+ L F D FE V QG R I +L+ W LL FP L RIP + L ++ AA Sbjct: 328 GYITEGQIVLSRDLDRRGVYPPIDVLPSLSRLMGLGAGPGKTRDDHRPVADQLYAFYARGRDVRRMAAIVGAANLGEEEKRLLAFADAFEDGLVGQGG-TFRTIEDTLEAGWRLLSGFPPAALTRIPERLLRARPAQPAA 466
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_THENV (V-type ATP synthase beta chain OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=atpB PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.515e-25 Identity = 55/137 (40.15%), Postives = 85/137 (62.04%), Query Frame = -2 Query: 386 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSR 796 GYITEGQ+ ++ + + IYPP +V+ SLSRL K AIGEG TR DH DV+N L + Y+ +++ + +VGE L + YL F D FE++F+ QG Y+ R+ ++LD+ W ++ I P + L + ++Y R Sbjct: 323 GYITEGQLVLSRSMWGKGIYPPFDVIMSLSRLAKDAIGEGKTREDHKDVANTLISAYSKALELRNLATLVGERNLGWRERRYLRFADAFEQRFIKQGYYERRSFEETLDIGWDVMSILPEDELTNARPQITQKFYRR 459
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_CENSY (V-type ATP synthase beta chain OS=Cenarchaeum symbiosum GN=atpB PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.675e-24 Identity = 53/139 (38.13%), Postives = 86/139 (61.87%), Query Frame = -2 Query: 380 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRDA 796 GYITEGQ+ + L + +YPP+N+L SLSRLMK IGEG TR DH ++SNQ Y Y+ ++V+A+ +VG+ L+ DL Y+ D E++ + Q ++R I ++L + W + P+ L ++ K ++++Y A Sbjct: 324 GYITEGQVVLGRDLFRQGVYPPVNILMSLSRLMKDGIGEGRTREDHQEISNQNYDAYSRAQEVRALAGIVGKAGLTDIDLRYMGVGDSLEQRLLTQATDENRTIEETLGIMWDTVSGLPKNELTKVKDKYVEKFYKGSA 462
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_GEOUR (V-type ATP synthase beta chain OS=Geobacter uraniireducens (strain Rf4) GN=atpB PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.312e-24 Identity = 55/121 (45.45%), Postives = 85/121 (70.25%), Query Frame = -2 Query: 434 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRE 796 GYITEGQI ++ +L + ++PP++VLPSLSRLM+ IG G TR DH ++++LY +YA G+D++ ++A+VG E +++ D + L+F D FER+ + QG+ R+I SLD LL+ F E Sbjct: 319 GYITEGQIVLSRELHQKGVFPPVDVLPSLSRLMQRGIGAGHTRSDHRAIADRLYRHYAKGRDLRRLEAIVGREGMTAGDRVMLDFADAFERELIHQGS-ARRDINGSLDRGVELLKRFSLE 438 The following BLAST results are available for this feature:
BLAST of CN182404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182404 ID=CN182404; Name=CN182404; organism=Citrus sinensis; type=EST; length=800bpback to top |