CN182404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_DROME (V-type proton ATPase subunit B OS=Drosophila melanogaster GN=Vha55 PE=1 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.830e-56 Identity = 104/139 (74.82%), Postives = 122/139 (87.77%), Query Frame = -2 Query: 380 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRDA 796 GYITEGQIY+ QL NRQIYPP+NVLPSLSRLMKSAIGEGMTR+DHSDVSNQLYA YAIGKDVQAMKAVVGEEAL+ +DLLYLEFL KFE+ F++QG Y++R +F+SLD+ W LLRIFP+E+L RIP L ++Y RD+ Sbjct: 350 GYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSAIGEGMTRKDHSDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFISQGNYENRTVFESLDIGWQLLRIFPKEMLKRIPASILAEFYPRDS 488
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_MANSE (V-type proton ATPase subunit B OS=Manduca sexta GN=VHA55 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.697e-56 Identity = 104/139 (74.82%), Postives = 121/139 (87.05%), Query Frame = -2 Query: 380 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRDA 796 GYITEGQIY+ QL NRQIYPP+NVLPSLSRLMKSAIGEGMTR+DHSDVSNQLYA YAIGKDVQAMKAVVGEEAL+ +DLLYLEFL KFE+ F+ QG Y++R +F+SLD+ W LLRIFP+E+L RIP L ++Y RD+ Sbjct: 354 GYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSAIGEGMTRKDHSDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFITQGNYENRTVFESLDIGWQLLRIFPKEMLKRIPASILAEFYPRDS 492
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_NEUCR (V-type proton ATPase subunit B OS=Neurospora crassa GN=vma-2 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.129e-55 Identity = 105/141 (74.47%), Postives = 123/141 (87.23%), Query Frame = -2 Query: 374 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRDAAN 796 GYITEGQI++ L NR IYPPINVLPSLSRLMKSAIGEGMTR+DH DVSNQLYA YAIG+D AMKAVVGEEALS+ED L LEFLDKFER F+AQG Y+SR IF+SLDLAW+LLRI+ +++L+RIP K +D++YSR AA+ Sbjct: 345 GYITEGQIFVDRGLHNRGIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYAKYAIGRDAAAMKAVVGEEALSNEDKLSLEFLDKFERSFIAQGPYESRTIFESLDLAWSLLRIYRKDMLNRIPKKIIDEFYSRSAAD 485
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_SCHPO (V-type proton ATPase subunit B OS=Schizosaccharomyces pombe GN=vma2 PE=1 SV=2) HSP 1 Score: 214.157 bits (544), Expect = 6.972e-55 Identity = 105/140 (75.00%), Postives = 120/140 (85.71%), Query Frame = -2 Query: 377 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRDAA 796 GYITEGQI++ QL N IYPPINVLPSLSRLMKSAIGEGMTR DH DVSNQLYA YAIG+D +MK+VVGEEALS ED L LEFL KFE+ F++QGAY++R IF++LDLAW+LLRIFPRE+L RIP K LDQYYSR +A Sbjct: 348 GYITEGQIFVDRQLHNNAIYPPINVLPSLSRLMKSAIGEGMTRNDHGDVSNQLYAMYAIGRDAASMKSVVGEEALSQEDRLALEFLGKFEKTFISQGAYENRTIFETLDLAWSLLRIFPREMLTRIPKKILDQYYSRSSA 487
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_CANTR (V-type proton ATPase subunit B OS=Candida tropicalis GN=VMA2 PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 6.972e-55 Identity = 103/138 (74.64%), Postives = 122/138 (88.41%), Query Frame = -2 Query: 383 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRD 796 GYITEGQI++ QL NR IYPPINVLPSLSRLMKSAIGEGMTR+DH DVSNQLYA YAIGKD AMKAVVGEEALS+ED L LEFL+KFE+ F++QGAY++R IF+SLDLAW+LLRI+P+E+L+RI K L+++Y RD Sbjct: 351 GYITEGQIFIDRQLHNRGIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYAKYAIGKDAAAMKAVVGEEALSTEDKLSLEFLEKFEKNFISQGAYENRTIFESLDLAWSLLRIYPKEMLNRISPKILEEFYGRD 488
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_CYACA (V-type proton ATPase subunit B OS=Cyanidium caldarium PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 5.902e-54 Identity = 105/137 (76.64%), Postives = 117/137 (85.40%), Query Frame = -2 Query: 386 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSR 796 GYITE QIY+ QL NRQIYPPINVLPSLSRLMKSAIGEGMTR+DHSDVSNQLYA YA+GKD AM+AVVG EALS EDLLYLEF DKFER+FV QGAY+ R+I+ SLD+AW LLRIFP ++L RIP K L +YY R Sbjct: 348 GYITEEQIYLDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHSDVSNQLYAAYAMGKDALAMRAVVGVEALSQEDLLYLEFHDKFERRFVNQGAYERRDIYTSLDMAWDLLRIFPVQMLRRIPEKILQEYYHR 484
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_DICDI (V-type proton ATPase subunit B OS=Dictyostelium discoideum GN=vatB PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 7.708e-54 Identity = 104/139 (74.82%), Postives = 118/139 (84.89%), Query Frame = -2 Query: 380 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRDA 796 GYITEGQI++ Q+ NRQIYPPINVLPSLSRLMKSAIG+ MTR DHS+VSNQ+YANYAIGKDVQAMKAVVGEEALSSED LYLEFL++FE FV Q Y++R+IF SLDL W+LLR FP LL RI KT+ QYYSR + Sbjct: 347 GYITEGQIFIDRQINNRQIYPPINVLPSLSRLMKSAIGDDMTRGDHSEVSNQMYANYAIGKDVQAMKAVVGEEALSSEDKLYLEFLERFESSFVGQNHYENRDIFNSLDLGWSLLRTFPSNLLKRITEKTIKQYYSRSS 485
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_YEAST (V-type proton ATPase subunit B OS=Saccharomyces cerevisiae GN=VMA2 PE=1 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 8.522e-53 Identity = 100/137 (72.99%), Postives = 117/137 (85.40%), Query Frame = -2 Query: 386 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSR 796 GYITEGQI++ QL N+ IYPPINVLPSLSRLMKSAIGEGMTR+DH DVSNQLYA YAIGKD AMKAVVGEEALS ED L LEFL+KFE+ F+ QGAY+ R +F+SLD AW+LLRI+P+E+L+RI K LD++Y R Sbjct: 351 GYITEGQIFVDRQLHNKGIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYAKYAIGKDAAAMKAVVGEEALSIEDKLSLEFLEKFEKTFITQGAYEDRTVFESLDQAWSLLRIYPKEMLNRISPKILDEFYDR 487
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_ENCCU (V-type proton ATPase subunit B OS=Encephalitozoon cuniculi GN=VMA2 PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 6.108e-51 Identity = 95/136 (69.85%), Postives = 118/136 (86.76%), Query Frame = -2 Query: 389 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYS 796 GYITEGQIY+ Q+ NRQIYPPINVLPSLSRLMKSAIGEGMTR+DH DVSNQLYA YAIGKD QAMKAVVGE++LS+ED + +EFL++FER+F++Q + R + QSLD+AW LL++FPRE+L+RIP LD+++S Sbjct: 335 GYITEGQIYVDRQMHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYAKYAIGKDAQAMKAVVGEDSLSAEDRISIEFLERFEREFISQRHDELRTVDQSLDIAWDLLKVFPREMLNRIPSDILDEFHS 470
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_PLAFA (V-type proton ATPase subunit B OS=Plasmodium falciparum GN=VAPB PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.566e-49 Identity = 94/141 (66.67%), Postives = 115/141 (81.56%), Query Frame = -2 Query: 374 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRDAAN 796 GYITEGQI++ L NRQIYPPINVLPSLSRLMKS IG MTR DH VS+QLY+NYAI +DV+AMKAV+GEEALS++D+LYLEFLDKFE++F+ Q Y+ R+I+QSLD+AW LLRIFP ++L +I L +YY R AN Sbjct: 354 GYITEGQIFVDRNLYNRQIYPPINVLPSLSRLMKSGIGHNMTRIDHPYVSDQLYSNYAIAQDVKAMKAVIGEEALSNDDILYLEFLDKFEKRFITQNTYECRDIYQSLDIAWELLRIFPEDMLKKIKTDILSKYYPRHHAN 494 The following BLAST results are available for this feature:
BLAST of CN182404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182404 ID=CN182404; Name=CN182404; organism=Citrus sinensis; type=EST; length=800bpback to top |