CN182404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_SULIK (V-type ATP synthase beta chain OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=atpB PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.293e-32 Identity = 69/135 (51.11%), Postives = 92/135 (68.15%), Query Frame = -2 Query: 392 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYY 796 GYITEGQI + L N+ IYPPINVL SLSRL K IGEG TR DH DVSNQL+A+YA D + + A++GE++LS D YL F + FERKFV+QG ++R+I +LD+ W +L + P L I + + +Y+ Sbjct: 322 GYITEGQIVLDRALYNKGIYPPINVLMSLSRLAKDGIGEGKTRDDHKDVSNQLFASYARAVDTRGLAAIIGEDSLSEVDRKYLLFGELFERKFVSQGFNENRDIETTLDIGWEILSVLPESELTNIKTQYIKKYH 456
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_SULIA (V-type ATP synthase beta chain OS=Sulfolobus islandicus (strain M.16.27) GN=atpB PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.293e-32 Identity = 69/135 (51.11%), Postives = 92/135 (68.15%), Query Frame = -2 Query: 392 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYY 796 GYITEGQI + L N+ IYPPINVL SLSRL K IGEG TR DH DVSNQL+A+YA D + + A++GE++LS D YL F + FERKFV+QG ++R+I +LD+ W +L + P L I + + +Y+ Sbjct: 322 GYITEGQIVLDRALYNKGIYPPINVLMSLSRLAKDGIGEGKTRDDHKDVSNQLFASYARAVDTRGLAAIIGEDSLSEVDRKYLLFGELFERKFVSQGFNENRDIETTLDIGWEILSVLPESELTNIKTQYIKKYH 456
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_CLOD6 (V-type ATP synthase beta chain OS=Clostridium difficile (strain 630) GN=atpB PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.293e-32 Identity = 65/138 (47.10%), Postives = 95/138 (68.84%), Query Frame = -2 Query: 383 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYYSRD 796 GYITEGQI ++ +L + I PPI+VLPSLSRL IG+G TR DH+D NQL+A Y+ GKD + + A++GE ALS DL+Y +F D+FE+++V+QG R I Q+L++ W LL + P+ L RI + ++Y ++ Sbjct: 320 GYITEGQIILSRELYKKDIQPPIDVLPSLSRLKDKGIGKGKTREDHADTMNQLFAAYSRGKDAKELMAILGESALSEIDLMYAKFADEFEKEYVSQGFRTDRTIEQTLEIGWKLLSMLPKSELKRIRDEYFEKYMPKE 457
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_STRPI (V-type ATP synthase beta chain OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=atpB PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.083e-31 Identity = 70/134 (52.24%), Postives = 89/134 (66.42%), Query Frame = -2 Query: 395 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQY 796 GYITEGQI ++ +L N+ PPINVLPSLSRL GEG TR DH+ NQL+A YA GK V+ + V+GE ALS D LY++F +FE +++ QG Y +RNI +L+L W LL I PR L RI LD+Y Sbjct: 322 GYITEGQIILSHELYNQGYRPPINVLPSLSRLKDKGSGEGKTRGDHAPTMNQLFAAYAQGKKVEELAVVLGESALSDVDKLYVKFTKRFEEEYINQGFYKNRNIEDTLNLGWELLSILPRTELKRIKDDLLDKY 455
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_METS5 (V-type ATP synthase beta chain OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=atpB PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.083e-31 Identity = 69/135 (51.11%), Postives = 90/135 (66.67%), Query Frame = -2 Query: 392 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQYY 796 GYITEGQI + L N+ IYPPINVL SLSRL K IGEG TR DH D+SNQL+A YA D + + A++GE++LS D YL F D FERKFV+QG ++R+I +LD+ W +L I P L + + +Y+ Sbjct: 325 GYITEGQITLDRSLYNKGIYPPINVLMSLSRLAKDGIGEGKTRDDHKDLSNQLFAAYAKAVDTRGLAAIIGEDSLSDTDKKYLMFGDAFERKFVSQGVNENRDIETTLDIGWEVLSILPERELTNVKVDYIKKYH 459
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_STRZJ (V-type ATP synthase beta chain OS=Streptococcus pneumoniae (strain JJA) GN=atpB PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.415e-31 Identity = 70/134 (52.24%), Postives = 88/134 (65.67%), Query Frame = -2 Query: 395 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQY 796 GYITEGQI ++ +L N+ PPINVLPSLSRL GEG TR DH+ NQL+A YA GK V+ + V+GE ALS D LY+ F +FE +++ QG Y +RNI +L+L W LL I PR L RI LD+Y Sbjct: 322 GYITEGQIILSHELYNQGYRPPINVLPSLSRLKDKGSGEGKTRGDHAPTMNQLFAAYAQGKKVEELAVVLGESALSDVDKLYVRFTKRFEEEYINQGFYKNRNIEDTLNLGWELLSILPRTELKRIKDDLLDKY 455
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_STRSV (V-type ATP synthase beta chain OS=Streptococcus sanguinis (strain SK36) GN=atpB PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.415e-31 Identity = 70/134 (52.24%), Postives = 87/134 (64.93%), Query Frame = -2 Query: 395 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQY 796 GYITEGQI ++ +L N PPINVLPSLSRL GEG TR DH+ NQL+A YA GK + + V+GE ALS D LY+ F D+FE++++ QG +R I +SLDL W LL I PR L RI +DQY Sbjct: 322 GYITEGQIILSRELYNSGYRPPINVLPSLSRLKDKGSGEGKTRGDHAATMNQLFAAYAQGKQAKELAVVLGESALSETDKLYVRFTDRFEQEYINQGFQTNRTIEESLDLGWELLSILPRTELKRIKDDMIDQY 455
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_STRPN (V-type ATP synthase beta chain OS=Streptococcus pneumoniae GN=atpB PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.415e-31 Identity = 70/134 (52.24%), Postives = 88/134 (65.67%), Query Frame = -2 Query: 395 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQY 796 GYITEGQI ++ +L N+ PPINVLPSLSRL GEG TR DH+ NQL+A YA GK V+ + V+GE ALS D LY+ F +FE +++ QG Y +RNI +L+L W LL I PR L RI LD+Y Sbjct: 322 GYITEGQIILSHELYNQGYRPPINVLPSLSRLKDKGSGEGKTRGDHAPTMNQLFAAYAQGKKVEELAVVLGESALSDVDKLYVRFTKRFEEEYINQGFYKNRNIEDTLNLGWELLSILPRTELKRIKDDLLDKY 455
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_STRPM (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M28 GN=atpB PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.415e-31 Identity = 69/134 (51.49%), Postives = 88/134 (65.67%), Query Frame = -2 Query: 395 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQY 796 GYITEGQI ++ +L PPINVLPSLSRL GEG TR+DH+ NQL+A YA GK + + V+GE ALS D LY+ F ++FE +++ QG Y +R+I +SLDL W LL I PR L RI LD+Y Sbjct: 322 GYITEGQIILSQELYKNGFRPPINVLPSLSRLKDKGSGEGKTRQDHAATMNQLFAAYAQGKQAKELAVVLGESALSETDKLYVAFTNRFEEEYINQGLYTNRSIEESLDLGWELLSILPRTELKRIKDDMLDRY 455
BLAST of CN182404 vs. ExPASy Swiss-Prot
Match: VATB_STRPJ (V-type ATP synthase beta chain OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=atpB PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.415e-31 Identity = 70/134 (52.24%), Postives = 88/134 (65.67%), Query Frame = -2 Query: 395 GYITEGQIYMTGQLQNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDSRNIFQSLDLAWTLLRIFPRELLHRIPGKTLDQY 796 GYITEGQI ++ +L N+ PPINVLPSLSRL GEG TR DH+ NQL+A YA GK V+ + V+GE ALS D LY+ F +FE +++ QG Y +RNI +L+L W LL I PR L RI LD+Y Sbjct: 322 GYITEGQIILSHELYNQGYRPPINVLPSLSRLKDKGSGEGKTRGDHAPTMNQLFAAYAQGKKVEELAVVLGESALSDVDKLYVRFTKRFEEEYINQGFYKNRNIEDTLNLGWELLSILPRTELKRIKDDLLDKY 455 The following BLAST results are available for this feature:
BLAST of CN182404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182404 ID=CN182404; Name=CN182404; organism=Citrus sinensis; type=EST; length=800bpback to top |