CN189032

Overview
NameCN189032
Unique NameCN189032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189032 vs. ExPASy Swiss-Prot
Match: CIPKO_ARATH (CBL-interacting serine/threonine-protein kinase 24 OS=Arabidopsis thaliana GN=CIPK24 PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 1.321e-11
Identity = 25/46 (54.35%), Postives = 40/46 (86.96%), Query Frame = -1 
Query:  414 SVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKS 551
            +V  EI+EVAPSL+MV++RK+ G+TLE+HKFYK L + L++++W++
Sbjct:  386 AVVIEIYEVAPSLFMVDVRKAAGETLEYHKFYKKLCSKLENIIWRA 431

HSP 2 Score: 26.1794 bits (56), Expect = 1.321e-11
Identity = 12/32 (37.50%), Postives = 18/32 (56.25%), Query Frame = -3 
Query:  553 IEEAASPLGFDVKKNNFKLKLQGEKTGRKGHL 648
            IE  A+ +GF     NFK +L+G  + + G L
Sbjct:  354 IEAVANSMGFKSHTRNFKTRLEGLSSIKAGQL 385
[Close]
BLAST of CN189032 vs. ExPASy Swiss-Prot
Match: CIPKO_ORYSJ (CBL-interacting protein kinase 24 OS=Oryza sativa subsp. japonica GN=CIPK24 PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.225e-11
Identity = 24/45 (53.33%), Postives = 37/45 (82.22%), Query Frame = -1 
Query:  417 SVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWK 551
            +V  ++FEVAPSL+MV++RK  GDTLE+H+FYKNL   ++ ++W+
Sbjct:  393 AVVLQVFEVAPSLFMVDVRKVAGDTLEYHRFYKNLCNKMESIIWR 437

HSP 2 Score: 26.1794 bits (56), Expect = 2.225e-11
Identity = 11/28 (39.29%), Postives = 16/28 (57.14%), Query Frame = -3 
Query:  565 IEEAASPLGFDVKKNNFKLKLQGEKTGR 648
            IE  A  +G  V   N+KL+L+G  + R
Sbjct:  361 IEVVAETMGLKVHSQNYKLRLEGVSSNR 388
The following BLAST results are available for this feature:
BLAST of CN189032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CIPKO_ARATH1.321e-1154.35CBL-interacting serine/threonine-protein kinase 24... [more]
CIPKO_ORYSJ2.225e-1153.33CBL-interacting protein kinase 24 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001D10_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189032 ID=CN189032; Name=CN189032; organism=Citrus sinensis; type=EST; length=650bp
TTTTTTTTTTTTTTAATCTAGAAAAAATAATTCTTTTACAATATCTTCTT
TTTATTGAATTTTCTGGTCCATAGACAAGTCACTACAAACAAACAAAATG
AAAACGACAGTGGACTGAGACTCTTTTTGATAATTTGCAGGTAATTGACT
ATGTTCAATATCCGTTGAGATGATACATCTGGAAGTCTGAAACCACACAA
AAGCCAAACCAAGGTACACGAGAAGTGAGTTCTGAATCACAAATGAAGGA
AACACATGGCCTAGAGGATAAAATACAAAGCTGAGATACAATGGTGCAAA
AGCAATATATAATTTGCTGGAGATATTCAGCAGTGCAAGTCATGAAAGGA
AATCCGCTATTGAGACCCTGCGCCACCAGCGACTGCAGATCCTTCAACAA
TTGTTTCATCTCCTGATTTCCAAACAACATCTTTCAGCCCAGTCGAAAGG
TTTTTGTAAAACTTGTGAAATTCTAAGGTATCTCCTCCAGATTTTCGAAG
CTCAACCATGTAAAGTGAAGGGGCCACCTCAAAAATCTCTGTTGCAACAG
ATTAAATGACCCTTGCGTCCAGTTTTTTCCCCTTGAAGCTTCAACTTGAA
ATTATTTTTCTTCACATCAAAACCCAAAGGCGATGCAGCTTCCTCAATTT
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