CN189028
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189028 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.545e-33 Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = -1 Query: 233 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 460 MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 94.3597 bits (233), Expect = 4.825e-19 Identity = 45/47 (95.74%), Postives = 47/47 (100.00%), Query Frame = -1 Query: 461 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 601 IQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 30 IQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN189028 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 4.970e-32 Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = -1 Query: 233 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 460 MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 91.6633 bits (226), Expect = 3.128e-18 Identity = 44/47 (93.62%), Postives = 46/47 (97.87%), Query Frame = -1 Query: 461 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 601 IQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 30 IQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN189028 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.553e-28 Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = -1 Query: 233 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 460 MQIFVKTLTGKTIT+E E DT+ VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG Sbjct: 1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76 HSP 2 Score: 85.1149 bits (209), Expect = 2.927e-16 Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = -1 Query: 461 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 601 I DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG Sbjct: 30 IADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76
BLAST of CN189028 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 7.427e-28 Identity = 58/77 (75.32%), Postives = 69/77 (89.61%), Query Frame = -1 Query: 230 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 460 MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG+ Sbjct: 1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGGY 77 HSP 2 Score: 85.8853 bits (211), Expect = 1.716e-16 Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = -1 Query: 461 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 601 I DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG Sbjct: 30 IADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76
BLAST of CN189028 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 6.288e-27 Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = -1 Query: 239 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 427 TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR Sbjct: 1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63 HSP 2 Score: 91.2781 bits (225), Expect = 4.085e-18 Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = -1 Query: 467 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 601 IQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR Sbjct: 19 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63
BLAST of CN189028 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 3.947e-21 Identity = 48/75 (64.00%), Postives = 60/75 (80.00%), Query Frame = -1 Query: 230 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 454 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGGF Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGF 77 HSP 2 Score: 68.5514 bits (166), Expect = 2.836e-11 Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = -1 Query: 461 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 601 +++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 30 VEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of CN189028 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.733e-21 Identity = 48/75 (64.00%), Postives = 60/75 (80.00%), Query Frame = -1 Query: 230 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 454 I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG+ Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 77 HSP 2 Score: 68.5514 bits (166), Expect = 2.836e-11 Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = -1 Query: 461 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 601 +++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 30 VEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of CN189028 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 8.794e-21 Identity = 47/75 (62.67%), Postives = 60/75 (80.00%), Query Frame = -1 Query: 230 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 454 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG+ Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 77 HSP 2 Score: 68.5514 bits (166), Expect = 2.836e-11 Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = -1 Query: 461 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 601 +++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 30 VEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of CN189028 vs. ExPASy Swiss-Prot
Match: NEDD8_CAEEL (NEDD8 OS=Caenorhabditis elegans GN=ned-8 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.500e-20 Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = -1 Query: 230 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 460 M I VKTLTGK I L++E +D ++ +K K+++KEGIPP QQRLIFAGKQ+ D +T ADY + S LHLVL LRGGF Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGGF 77 HSP 2 Score: 67.781 bits (164), Expect = 4.837e-11 Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = -1 Query: 461 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 601 +++KEGIPP QQRLIFAGKQ+ D +T ADY + S LHLVL LRGG Sbjct: 30 VEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76
BLAST of CN189028 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.959e-20 Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = -1 Query: 233 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 454 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76 HSP 2 Score: 68.5514 bits (166), Expect = 2.836e-11 Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = -1 Query: 461 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 601 +++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 30 VEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76 The following BLAST results are available for this feature:
BLAST of CN189028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 95
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189028 ID=CN189028; Name=CN189028; organism=Citrus sinensis; type=EST; length=601bpback to top |