CN189027
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189027 vs. ExPASy Swiss-Prot
Match: IF5A_DICDI (Eukaryotic translation initiation factor 5A OS=Dictyostelium discoideum GN=eif5a PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 7.812e-28 Identity = 58/119 (48.74%), Postives = 90/119 (75.63%), Query Frame = -3 Query: 263 KGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 619 KG PCK+V++STSKTGKHGHAK + IDIF+GKK E+I PS+HN DVP+V+R +Y ++D+ +DG++SLL G K+DL LP D+ + ++ EGK+ +++V+S++G+E + ++K Sbjct: 39 KGFPCKIVDMSTSKTGKHGHAKVNITAIDIFTGKKYEEICPSTHNIDVPNVSRKEYTVMDV-QDGYLSLLDAGGEVKEDLALPEDD-IGKEITQMLKEGKEPLVSVISALGKEGVVSVK 155
BLAST of CN189027 vs. ExPASy Swiss-Prot
Match: IF5A2_CAEEL (Eukaryotic translation initiation factor 5A-2 OS=Caenorhabditis elegans GN=iff-2 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.333e-27 Identity = 68/121 (56.20%), Postives = 87/121 (71.90%), Query Frame = -3 Query: 263 KGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLL-TENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLT-VMSSMGEEQICALK 619 KGRPCK+VE+STSKTGKHGHAK H V IDIF+ KKLEDI PS+HN DVP V R +Y L+ I +DG+ SL+ E+ KDDL+LP D L Q++D + + + VL V+S++GEE I K Sbjct: 38 KGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTSKKLEDICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLP-DTELGQQIRDAYEKDEGSVLVQVVSAIGEEAILGWK 156
BLAST of CN189027 vs. ExPASy Swiss-Prot
Match: IF5A1_CAEEL (Eukaryotic translation initiation factor 5A-1 OS=Caenorhabditis elegans GN=iff-1 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.778e-25 Identity = 64/121 (52.89%), Postives = 84/121 (69.42%), Query Frame = -3 Query: 263 KGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLL-TENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLT-VMSSMGEEQICALK 619 +GRPCK+VE+STSKTGKHGHAK H V IDIF+ KKLEDI PS+HN DVP V R +Y L+ I EDGF SL+ E+ KDDL++P + L +++ + + VL V+++ GEE I K Sbjct: 38 RGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTTKKLEDICPSTHNMDVPVVKRREYILMSI-EDGFCSLMDPESCELKDDLKMPEGD-LGNTIREALEKDEGSVLVQVVAACGEEAILGYK 156
BLAST of CN189027 vs. ExPASy Swiss-Prot
Match: YE034_YEAST (Putative uncharacterized protein YEL034C-A OS=Saccharomyces cerevisiae GN=YEL034C-A PE=5 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 4.601e-12 Identity = 44/117 (37.61%), Postives = 65/117 (55.56%), Query Frame = 2 Query: 254 ANILEGTDLLLTH*RHDSQNQVLPLSKTVLELGQQSLIGWEPQIILGVPIFSQQTHKSILRNINQLIVGTVDMGNIRVMRRGDNIFQLLSTEDINSNKVALSMTVLSSLGGGDFHNL 604 ++ LEG TH D +QVL K+ L+ Q W IIL V + Q ++++ N+ QL+ ++D N V+ R IFQLL++EDIN N++ S+TVL+SL G NL Sbjct: 27 SSFLEGDGGFFTHSGDDGNHQVLTFIKSSLQTVTQFTF-WSLDIILSVTVHVHQRQETVI-NVQQLVFVSLDNWNFHVVSRWRQIFQLLTSEDINGNQMDFSVTVLTSLRSGHVDNL 141
BLAST of CN189027 vs. ExPASy Swiss-Prot
Match: IF5A_THEPD (Translation initiation factor 5A OS=Thermofilum pendens (strain Hrk 5) GN=eIF5A PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.677e-11 Identity = 35/94 (37.23%), Postives = 52/94 (55.32%), Query Frame = -3 Query: 335 GRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 616 G PCKVVEV SKTGKHG AK VGI F G K +VP+ +VP + + Q++ D V L+ + ++ +P +E + ++L +G Sbjct: 21 GEPCKVVEVEKSKTGKHGSAKARIVGIGFFDGGKRSIVVPTDARVEVPIIKKFTAQVVAFVGDN-VQLMNLEDYSTFEIPMPQEEEIKSKLSEG 113 The following BLAST results are available for this feature:
BLAST of CN189027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189027 ID=CN189027; Name=CN189027; organism=Citrus sinensis; type=EST; length=621bpback to top |