CN189017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_DESVH (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groS PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.845e-22 Identity = 50/94 (53.19%), Postives = 70/94 (74.47%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 ++KPL DRVLVK EEKT GG+++P TA+ KP GEVVA G GKT KL ++VK G V+++KYAGTE++++G HL++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIKIDGVEHLVMREDDILAIIE 95
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_DESDG (10 kDa chaperonin OS=Desulfovibrio desulfuricans (strain G20) GN=groS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.852e-22 Identity = 49/94 (52.13%), Postives = 72/94 (76.60%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 ++KPL DRVLVK EEKT GG+++P TA+ KP GEV+AVG GKT K + ++VK G V+++KYAGTE++L+G +HL++REDD++ I++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVIAVGPGKTADDGKVIAMTVKTGDVVLFNKYAGTEVKLDGVDHLVMREDDILAIIQ 95
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_DESHY (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain Y51) GN=groS PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.412e-21 Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGIL 522 +IKPLGDRV++K +EEKT GI +P TA+ KPQ GEVVAVG GK ++ + VK G +VIYSKYAGTE++ +G +LIL+E D++ ++ Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLILKETDILAVI 93
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_DESHD (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=groS PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.412e-21 Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGIL 522 +IKPLGDRV++K +EEKT GI +P TA+ KPQ GEVVAVG GK ++ + VK G +VIYSKYAGTE++ +G +LIL+E D++ ++ Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLILKETDILAVI 93
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_SYNJB (10 kDa chaperonin OS=Synechococcus sp. GN=groS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.844e-21 Identity = 52/95 (54.74%), Postives = 71/95 (74.74%), Query Frame = 1 Query: 244 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 +++KPLGDRVLVKI +EKT GGIFLP TA+ KPQ GEVVAVG GK + KL + +K G +V+YSKYAGTE++L +++L E D++ I++ Sbjct: 9 STLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDKVLYSKYAGTEVKLGSDEYVLLAERDILAIVQ 103
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_SYNJA (10 kDa chaperonin OS=Synechococcus sp. (strain JA-3-3Ab) GN=groS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.844e-21 Identity = 52/95 (54.74%), Postives = 71/95 (74.74%), Query Frame = 1 Query: 244 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 +++KPLGDRVLVKI +EKT GGIFLP TA+ KPQ GEVVAVG GK + KL + +K G +V+YSKYAGTE++L +++L E D++ I++ Sbjct: 9 STLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDRVLYSKYAGTEVKLGSDEYVLLAERDILAIVQ 103
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_LAWIP (10 kDa chaperonin OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=groS PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.408e-21 Identity = 49/93 (52.69%), Postives = 69/93 (74.19%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGIL 522 ++KPL DRVLVK EEKT GG+++P TA+ KP GEVVAVG GK KL ++VK G V+++KYAGTE++L+G HL++REDD++ ++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVKLDGVEHLVMREDDILAVI 94
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_LAWIN (10 kDa chaperonin OS=Lawsonia intracellularis GN=groS PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.408e-21 Identity = 49/93 (52.69%), Postives = 69/93 (74.19%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGIL 522 ++KPL DRVLVK EEKT GG+++P TA+ KP GEVVAVG GK KL ++VK G V+++KYAGTE++L+G HL++REDD++ ++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVKLDGVEHLVMREDDILAVI 94
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_DESDA (10 kDa chaperonin OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=groS PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.151e-21 Identity = 48/94 (51.06%), Postives = 72/94 (76.60%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKT--KLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 +KPL DRVLVK EEKT GG+++P TA+ KP G+VVAVG GK VG + ++VK G +V+++KYAGTE++L+G +HL++RE+D++ I++ Sbjct: 3 LKPLNDRVLVKRLETEEKTAGGLYIPDTAKEKPSKGQVVAVGPGK-VGDNGERTALAVKAGDEVLFNKYAGTEVKLDGVDHLVMREEDILAIID 95
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_MYXXD (10 kDa chaperonin OS=Myxococcus xanthus (strain DK 1622) GN=groS PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.561e-20 Identity = 47/93 (50.54%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 I+PL DR++VK E KT GG+F+P TA+ KP G+V+AVG GK K+ + +K G +++SKYAGTE++L+G HLILRE+DV+G++E Sbjct: 3 IRPLQDRLIVKRVAEENKTKGGLFIPDTAKEKPLEGKVIAVGNGKVQEDGKVRPLDIKAGDTILFSKYAGTEIKLDGEEHLILREEDVLGVIE 95 The following BLAST results are available for this feature:
BLAST of CN189017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189017 ID=CN189017; Name=CN189017; organism=Citrus sinensis; type=EST; length=617bpback to top |