CN189017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_CUPTR (10 kDa chaperonin OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=groS PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 37/93 (39.78%), Postives = 60/93 (64.52%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGIL 522 +++PL DRV+VK E KT GI +P A KP GEV+A+G GK K + + VK G +V++ KYAG ++++G L++RE+D++ ++ Sbjct: 2 NLRPLHDRVIVKRLDNETKTASGIVIPDNAAEKPDQGEVLAIGPGKKDDKGNNIALDVKVGDRVLFGKYAGQGVKVDGQELLVMREEDIMAVV 94
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_ALCBS (10 kDa chaperonin OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=groS PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 SI+PL DRVLV+ + E K+ GGI LP +A KP GEV+AVG GK T + VK G VI+ +Y+G+ +++ G LI+ E +++ ++E Sbjct: 2 SIRPLHDRVLVRREEEETKSAGGIVLPGSAAEKPSRGEVIAVGNGKITENGDVRPLDVKAGDTVIFGQYSGSTVKVEGEELLIMSEAEILAVVE 95
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_WOLPM (10 kDa chaperonin OS=Wolbachia pipientis wMel GN=groS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.414e-13 Identity = 37/94 (39.36%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEG-KTVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 S+ L D VL IK + E+ GGI LPS+A+ KP GEV+A+GEG + ++ ++VK G +V Y ++AGTE+E N ++++E D++ +++ Sbjct: 5 SLNVLDDSVL--IKPISEEKQGGIVLPSSAEKKPTKGEVIAIGEGSRNSSGERVTLTVKAGDKVFYRQWAGTEIEHNNEKLIVMKESDILAVIK 96
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_THEYD (10 kDa chaperonin OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=groS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.414e-13 Identity = 39/93 (41.94%), Postives = 61/93 (65.59%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVE-EKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 IKPL DRV+VK + E EKT GGI++P A+ KPQ G VV +G VK G V++ KYAG++++++ +LI++E++++GI+E Sbjct: 3 IKPLKDRVVVKFSSEELEKTPGGIYVPDVAKEKPQKGTVVEIGSEVK--------EVKVGDTVLFDKYAGSKIKVDDVEYLIIKEEEILGIVE 87
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_POLNA (10 kDa chaperonin OS=Polaromonas naphthalenivorans (strain CJ2) GN=groS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.414e-13 Identity = 38/94 (40.43%), Postives = 63/94 (67.02%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLD-ISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 +++PL DRV+VK E KT GI +P +A KP GEV+AVG GK K +L ++VK G +V++ KY+G ++++G L+++E+D+ ++E Sbjct: 2 NLRPLHDRVIVKRVENETKTASGIVIPDSAAEKPDQGEVLAVGPGKKNDKGELGAMAVKVGDRVLFGKYSGQTVKVDGDELLVMKEEDLFAVVE 95
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_CORGL (10 kDa chaperonin OS=Corynebacterium glutamicum GN=groS PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.414e-13 Identity = 36/94 (38.30%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 +IKPL D++LV+I E T G+ +P +A+ KPQ V+AVG G+ K ++ + +K VI+S+Y GTE++ G +L+L D++ I+E Sbjct: 5 NIKPLEDKILVQINEAETTTASGLVIPDSAKEKPQEATVIAVGPGRFDDKGNRIPLDIKEDDVVIFSRYGGTEIKFGGVEYLLLSARDILAIVE 98
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_CORGB (10 kDa chaperonin OS=Corynebacterium glutamicum (strain R) GN=groS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.414e-13 Identity = 36/94 (38.30%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 +IKPL D++LV+I E T G+ +P +A+ KPQ V+AVG G+ K ++ + +K VI+S+Y GTE++ G +L+L D++ I+E Sbjct: 5 NIKPLEDKILVQINEAETTTASGLVIPDSAKEKPQEATVIAVGPGRFDDKGNRIPLDIKEDDVVIFSRYGGTEIKFGGVEYLLLSARDILAIVE 98
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_WOLWR (10 kDa chaperonin OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=groS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.152e-13 Identity = 37/94 (39.36%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEG-KTVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 S+ L D VL IK + E+ GGI LPS+A+ KP GEV+A+GEG + ++ ++VK G +V Y ++AGTE+E N ++++E D++ +++ Sbjct: 5 SLNVLDDSVL--IKPISEEKQGGIVLPSSAEKKPTKGEVIAIGEGSRNSSGERVTLTVKAGDKVFYRQWAGTEIEHNDEKLIVMKESDILAVIK 96
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_RHOFD (10 kDa chaperonin OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=groS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.152e-13 Identity = 38/93 (40.86%), Postives = 61/93 (65.59%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLD-ISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 ++PL DRV+VK E KT GI +P +A KP GEV+AVG GK K ++ ++VK G +V++ KY+G +++ G L+++EDD+ ++E Sbjct: 3 LRPLHDRVIVKRVENETKTASGIVIPDSAAEKPDQGEVLAVGPGKKNDKGEISPMAVKVGDRVLFGKYSGQTVKVAGDELLVMKEDDLFAVVE 95
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_FINM2 (10 kDa chaperonin OS=Finegoldia magna (strain ATCC 29328) GN=groS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.152e-13 Identity = 39/94 (41.49%), Postives = 65/94 (69.15%), Query Frame = 1 Query: 247 SIKPLGDR-VLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 ++KP+GDR VL K + EEKT GI LPS+A+ P EV+A+G + K+ ++K G +VIYSKYAGTE++L ++++++ +D++ ++E Sbjct: 2 NLKPIGDRLVLKKQEKEEEKTFSGIVLPSSAKEAPVYAEVLAIGS-EVEEDEKMKGNIKVGDKVIYSKYAGTEIKLEDTDYILVKYEDILAVVE 94 The following BLAST results are available for this feature:
BLAST of CN189017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189017 ID=CN189017; Name=CN189017; organism=Citrus sinensis; type=EST; length=617bpback to top |