CN189017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_STAES (10 kDa chaperonin OS=Staphylococcus epidermidis (strain ATCC 12228) GN=groS PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.043e-12 Identity = 34/93 (36.56%), Postives = 60/93 (64.52%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 +KPLG+RV+++ K E+ T GI L +A+ K G ++AVG+G+ + T++ V G +++ +YAGTE++ +LIL E+D++ I+E Sbjct: 2 LKPLGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIIAVGQGRLLDNGTQVAPQVSEGDTIVFQQYAGTEVKRGDKTYLILNEEDILAIIE 94
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_STAEQ (10 kDa chaperonin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=groS PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.043e-12 Identity = 34/93 (36.56%), Postives = 60/93 (64.52%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 +KPLG+RV+++ K E+ T GI L +A+ K G ++AVG+G+ + T++ V G +++ +YAGTE++ +LIL E+D++ I+E Sbjct: 2 LKPLGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIIAVGQGRLLDNGTQVAPQVSEGDTIVFQQYAGTEVKRGDKTYLILNEEDILAIIE 94
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_VESOH (10 kDa chaperonin OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=groS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.669e-12 Identity = 38/96 (39.58%), Postives = 65/96 (67.71%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK--TVGKT-KLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 +I+PL DRV+V+ ++ T G+ +P +A KP G VVAVG GK G T LD+++ G +V++++YAGTE++++G LI++E D+V +++ Sbjct: 2 NIRPLHDRVVVRRVEEKKTTSSGLIIPDSATEKPSEGVVVAVGNGKKNDNGDTIALDVTI--GNKVLFAQYAGTEIKVDGKKLLIMKEGDIVAVIK 95
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_THEAB (10 kDa chaperonin OS=Thermosipho africanus (strain TCF52B) GN=groS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.669e-12 Identity = 35/90 (38.89%), Postives = 59/90 (65.56%), Query Frame = 1 Query: 256 PLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 PLG R+L+K E++T+GGI LP TA+ KP E+VAVG + D+ + G +VI+SKY+GTE+++ +++I+ +D++ +E Sbjct: 5 PLGSRLLIKPIQEEKRTEGGIVLPDTAKEKPMKAEIVAVGNLEDA-----DVDLHVGDKVIFSKYSGTEIKIEEEDYIIIDVEDILAKIE 89
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_CHLTB (10 kDa chaperonin OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=groS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.669e-12 Identity = 39/93 (41.94%), Postives = 56/93 (60.22%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 IKPLGDR+LVK + GGI LP TA+ K EVVA+G GK K +L V+ G V+ KY+G EL + G ++I++ +V+ +L+ Sbjct: 10 IKPLGDRILVKREEEASTARGGIILPDTAKKKQDRAEVVALGTGKKDDKGQQLPFEVQVGDIVLIDKYSGQELTVEGEEYVIVQMSEVIAVLQ 102
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_CHLT2 (10 kDa chaperonin OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=groS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.669e-12 Identity = 39/93 (41.94%), Postives = 56/93 (60.22%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 IKPLGDR+LVK + GGI LP TA+ K EVVA+G GK K +L V+ G V+ KY+G EL + G ++I++ +V+ +L+ Sbjct: 10 IKPLGDRILVKREEEASTARGGIILPDTAKKKQDRAEVVALGTGKKDDKGQQLPFEVQVGDIVLIDKYSGQELTVEGEEYVIVQMSEVIAVLQ 102
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_WOLSU (10 kDa chaperonin OS=Wolinella succinogenes GN=groS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 + KPLG RVLV+ + KT GI +P A+ KP G V A+ E V K L +K G+QV+++KY+GT+++L G +LIL+ +D++G +E Sbjct: 2 NFKPLGQRVLVERLEEDTKTASGIIIPDNAKEKPLMGTVKALSE--EVAKEGL---LKAGSQVVFAKYSGTDVKLEGKEYLILKVEDLLGTIE 89
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_VEREI (10 kDa chaperonin OS=Verminephrobacter eiseniae (strain EF01-2) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 37/94 (39.36%), Postives = 60/94 (63.83%), Query Frame = 1 Query: 247 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELELNGANHLILREDDVVGILE 525 +++PL DRV+VK E T GI +P A KP GEV+AVG GK K +L ++VK G +V++ KY+G ++++ L+++EDD+ ++E Sbjct: 2 NLRPLHDRVIVKRIESETTTASGIVIPDNAAEKPDQGEVLAVGPGKKNDKGELIALNVKVGDRVLFGKYSGQTVKVHRDELLVMKEDDLFAVVE 95
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_PSEMY (10 kDa chaperonin OS=Pseudomonas mendocina (strain ymp) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 35/94 (37.23%), Postives = 64/94 (68.09%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTE-LELNGANHLILREDDVVGILE 525 ++PL DRV+++ E KT GGI LP +A KP GEVVAVG GK + ++ ++VK G +V++ Y+G+ ++++G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNQGEVVAVGTGKVLENGEVRPLAVKVGDKVVFGPYSGSNTVKVDGEDLLVMGENEILAVIE 96
BLAST of CN189017 vs. ExPASy Swiss-Prot
Match: CH10_OLEAN (10 kDa chaperonin OS=Oleispira antarctica GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 37/94 (39.36%), Postives = 57/94 (60.64%), Query Frame = 1 Query: 250 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLD-ISVKPGTQVIYSKYAG-TELELNGANHLILREDDVVGILE 525 I+PL DR++V+ K E T GGI LP A KP G V++VG G+ + + ++V G V++ KY+G ++++G LIL E D+ G+LE Sbjct: 3 IRPLHDRIVVRRKEEETATAGGIILPGAAAEKPNQGVVISVGTGRILDNGSVQALAVNEGDVVVFGKYSGQNTIDIDGEELLILNESDIYGVLE 96 The following BLAST results are available for this feature:
BLAST of CN189017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189017 ID=CN189017; Name=CN189017; organism=Citrus sinensis; type=EST; length=617bpback to top |