CN189011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189011 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.951e-14 Identity = 50/128 (39.06%), Postives = 72/128 (56.25%), Query Frame = -1 Query: 293 QRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQPA---DPISVVTAG 667 Q+ Q++L+GE+L LN KEL+ LE+QL+ SLK IRS ++Q ML+++ ELQ KE+ L E NK L++ L+E +V Q+ +P + F E PT I PA + I V AG Sbjct: 106 QKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQVQWDQ------TQPQTSSSSSSFMMREALPTTNISNYPAAAGERIEDVAAG 227
BLAST of CN189011 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.951e-14 Identity = 50/128 (39.06%), Postives = 72/128 (56.25%), Query Frame = -1 Query: 293 QRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQPA---DPISVVTAG 667 Q+ Q++L+GE+L LN KEL+ LE+QL+ SLK IRS ++Q ML+++ ELQ KE+ L E NK L++ L+E +V Q+ +P + F E PT I PA + I V AG Sbjct: 106 QKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQVQWDQ------TQPQTSSSSSSFMMREALPTTNISNYPAAAGERIEDVAAG 227
BLAST of CN189011 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.414e-14 Identity = 54/149 (36.24%), Postives = 81/149 (54.36%), Query Frame = -1 Query: 260 RSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL-MEGYQVNTLQ---LNPSAEDCGYGLKPAQPQGDTFFHALEC--EPTLQIGYQPADPISVVTAGPSLN--------NYMQGWL 664 R+ RNLLGE+LG + KEL++LERQL+ +L R +TQ M++ + +L+ KE+ L + NK LK + EG+ T Q N +A G P + + L+C EP LQIG+Q V G S++ N++QGW+ Sbjct: 105 RTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGHAFKTFQDLWANSAASVAGDPNNSEFPVEPSHPNVLDCNTEPFLQIGFQ--QHYYVQGEGSSVSKSNVAGETNFVQGWV 251
BLAST of CN189011 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 44/127 (34.65%), Postives = 74/127 (58.27%), Query Frame = -1 Query: 305 QRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNP-SAEDCGYGLKPAQPQGD---TFFHALECEPTLQIG--YQPADPISV 667 +R+QR+ LGE+L ++SKEL++LE+QLD +LK IRS + Q M D++ ELQ KE+ + E N L +++ E ++ Q ++ G+ + P P + + + P L +G YQ DP+ + Sbjct: 106 ERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQNHGHNMPPPPPPQQIQHPYMLSHQPSPFLNMGGLYQEEDPMEM 232
BLAST of CN189011 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.019e-11 Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = -1 Query: 317 QRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL------KQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFH------ALECEPTLQIG--YQPAD 667 +R+QR+ LGEEL P++ K+L++LE+QL+ +LK IRS + Q M ++L LQ KE+ + E N L ++ ++ Q QLN S +D PQ F H A + P L +G YQ D Sbjct: 108 ERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILRTKQTQCEQLNRSVDDV--------PQPQPFQHPHLYMIAHQTSPFLNMGGLYQEED 230
BLAST of CN189011 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.019e-11 Identity = 41/129 (31.78%), Postives = 74/129 (57.36%), Query Frame = -1 Query: 305 QRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNP-SAEDCGYGLKPAQPQGD-----TFFHALECEPTLQIG--YQPADPISV 667 +R+QR+ LGE+L ++ KEL++LE+QLD +LK IR+ + Q M +++ ELQ KE+ + E N L +++ E ++ Q ++ G+ + P P + + + P L +G YQ DP+++ Sbjct: 106 ERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQNQGHNMPPPLPPQQHQIQHPYMLSHQPSPFLNMGGLYQEDDPMAM 234
BLAST of CN189011 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.444e-11 Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = -1 Query: 416 QRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAED 667 Q+SQR LLGE+L L KEL+ LE QL+ SLK IRS + Q + ++++ELQ KE+ L N L++ + + N +N + E+ Sbjct: 106 QKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKEKNNAIINTNREE 189
BLAST of CN189011 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.444e-11 Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = -1 Query: 416 QRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAED 667 Q+SQR LLGE+L L KEL+ LE QL+ SLK IRS + Q + ++++ELQ KE+ L N L++ + + N +N + E+ Sbjct: 106 QKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKEKNNAIINTNREE 189
BLAST of CN189011 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11 Identity = 33/69 (47.83%), Postives = 51/69 (73.91%), Query Frame = -1 Query: 461 QRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 667 Q+ ++L+GE+L LN KEL+ LE+QL+ SLK I S ++ ML++++ELQ KE+ L E NK L++ L+E Sbjct: 106 QKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKELVE 174 The following BLAST results are available for this feature:
BLAST of CN189011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189011 ID=CN189011; Name=CN189011; organism=Citrus sinensis; type=EST; length=667bpback to top |