EY666137

Overview
NameEY666137
Unique NameEY666137
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666137 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 8.162e-29
Identity = 57/123 (46.34%), Postives = 80/123 (65.04%), Query Frame = 3
Query:  441 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--PDSEPADSSSGELLQDWKNMKKEYDKLTQNINMQAKK 803
            +L  VD FV+T D   EPP+IT NTVLS+LA+DYPV K++CYVSDD  + L+F SLVE + FA+ WVPFCKKY+++ RAP  YF        D      +++ + MK++Y++    +N    K
Sbjct:  259 QLAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCYVSDDGAAMLSFESLVETADFARKWVPFCKKYSIEPRAPEFYFSLKIDYLRDKVQPSFVKERRAMKRDYEEFKIRMNALVAK 381          

HSP 2 Score: 35.039 bits (79), Expect = 8.162e-29
Identity = 14/38 (36.84%), Postives = 20/38 (52.63%), Query Frame = 1
Query:  208 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 321
            W  + +CE  F   W+L    KW+P+  +TY  RL  R
Sbjct:  213 WLTSVICEIWFAVSWVLDQFPKWSPINRETYIDRLSAR 250          
BLAST of EY666137 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.341e-28
Identity = 58/120 (48.33%), Postives = 82/120 (68.33%), Query Frame = 3
Query:  441 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPDSEPADSSSGEL----LQDWKNMKKEYDKLTQNIN 788
            EL PVD+FV+T D   EPP+IT NTVLS+LAVDYPV K+ACYVSDD  + L F +L   ++FA+ WVPFCKK++++ RAP  YF  S+  D    ++    + + + MK++Y++    IN
Sbjct:  357 ELAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSYTAEFARKWVPFCKKFSIEPRAPEWYF--SQKMDYLKHKVDPAFVMERRAMKRDYEEFKVKIN 474          

HSP 2 Score: 33.113 bits (74), Expect = 2.341e-28
Identity = 15/38 (39.47%), Postives = 19/38 (50.00%), Query Frame = 1
Query:  208 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 321
            W  + +CE  F   WIL    KW P+  +TY  RL  R
Sbjct:  311 WLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLR 348          
BLAST of EY666137 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 2.341e-28
Identity = 57/117 (48.72%), Postives = 78/117 (66.67%), Query Frame = 3
Query:  444 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPDSEP--ADSSSGELLQDWKNMKKEYDKLTQNIN 788
            L PVD+FV+T D   EPP+IT NTVLS+LAVDYPV K+ACYVSDD  + L F +L E ++FA+ WVPFCKKY ++ RAP  YF        +      +++ + MK++Y++    IN
Sbjct:  352 LSPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETAEFARKWVPFCKKYCIEPRAPEWYFCHKMDYLKNKVHPAFVRERRAMKRDYEEFKVKIN 468          

HSP 2 Score: 33.8834 bits (76), Expect = 2.341e-28
Identity = 14/38 (36.84%), Postives = 20/38 (52.63%), Query Frame = 1
Query:  208 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 321
            W ++ +CE  F   W+L    KW P+  +TY  RL  R
Sbjct:  305 WLISVICEIWFAVSWVLDQFPKWYPIERETYLDRLSLR 342          
BLAST of EY666137 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 3.064e-28
Identity = 58/116 (50.00%), Postives = 77/116 (66.38%), Query Frame = 3
Query:  441 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPDSEPADSSSGELLQDWKNMKKEYDKLTQNIN 788
            ELP VD+FV TAD   EPP++ ++TVLS++A DY   KL  Y+SDDA S L FY L EAS+FAK W+PFCKKY V+ R+P  YF  ++ A    G   ++W  MK+ Y  +T  +N
Sbjct:  110 ELPSVDIFVCTADPTAEPPMLVISTVLSVMAYDYLPEKLNIYLSDDAGSVLTFYVLCEASEFAKHWIPFCKKYKVEPRSPAAYF--AKVASPPDGCGPKEWFTMKELYKDMTDRVN 223          

HSP 2 Score: 32.7278 bits (73), Expect = 3.064e-28
Identity = 12/39 (30.77%), Postives = 21/39 (53.85%), Query Frame = 1
Query:  202 FAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQE 318
            +AW      E  F F W+L ++ +W P+  +T+  RL +
Sbjct:   66 WAWLGMLAAELWFGFYWVLTLSVRWCPVYRRTFKDRLAQ 104          
BLAST of EY666137 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 5.166e-28
Identity = 56/118 (47.46%), Postives = 78/118 (66.10%), Query Frame = 3
Query:  441 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPDSEP--ADSSSGELLQDWKNMKKEYDKLTQNIN 788
            EL  VD+FV+T D   EPP+IT NTVLS+LAVDYPV ++ACYVSDD  + L F +L E ++FA+ WVPFCKKY ++ RAP  YF        +      +++ + MK++Y++    IN
Sbjct:  339 ELAGVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDRVACYVSDDGAAMLTFEALSETAEFARKWVPFCKKYTIEPRAPEWYFCHKMDYLKNKVHPAFVRERRAMKRDYEEFKVKIN 456          

HSP 2 Score: 33.8834 bits (76), Expect = 5.166e-28
Identity = 14/38 (36.84%), Postives = 20/38 (52.63%), Query Frame = 1
Query:  208 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 321
            W ++ +CE  F   W+L    KW P+  +TY  RL  R
Sbjct:  293 WLISVICEIWFAVSWVLDQFPKWYPIERETYLDRLSLR 330          
BLAST of EY666137 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 6.719e-28
Identity = 58/118 (49.15%), Postives = 83/118 (70.34%), Query Frame = 3
Query:  441 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFP-DSEP-ADSSSGELLQDWKNMKKEYDKLTQNIN 788
            +LP +DMFV+TAD E EPP++T NT+LS+LA DYPV KLACYVSDD  + L F ++ EA+ FA +WVPFC+K+N++ R P  YF    +P  +    + ++D + +K+EYD+    IN
Sbjct:  374 DLPGLDMFVSTADPEKEPPLVTSNTILSILAADYPVEKLACYVSDDGGALLTFEAMAEAASFANMWVPFCRKHNIEPRNPDSYFSLKRDPYKNKVKADFVKDRRRVKREYDEFKVRIN 491          

HSP 2 Score: 22.7126 bits (47), Expect = 6.719e-28
Identity = 11/38 (28.95%), Postives = 18/38 (47.37%), Query Frame = 1
Query:  208 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 321
            W ++ +CE  F   W+L    K  P+   T    L+E+
Sbjct:  323 WGMSVVCELWFALSWLLDQLPKLCPINRATDLNVLKEK 360          
BLAST of EY666137 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 9.384e-27
Identity = 57/120 (47.50%), Postives = 82/120 (68.33%), Query Frame = 3
Query:  441 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPDSEPADSSSG----ELLQDWKNMKKEYDKLTQNIN 788
            +LP +D+FV+TAD E EP + T  T+LS+LAVDYPV KLACYVSDD  + L F ++ EA+ FA +WVPFCKK++++ R P  YF  S   D + G    + ++D + +K+E+D+    IN
Sbjct:  377 DLPGLDVFVSTADPEKEPVLTTATTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFANVWVPFCKKHDIEPRNPDSYF--SVKGDPTKGKRRNDFVKDRRRVKREFDEFKVRIN 494          

HSP 2 Score: 26.1794 bits (56), Expect = 9.384e-27
Identity = 12/38 (31.58%), Postives = 20/38 (52.63%), Query Frame = 1
Query:  208 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 321
            W ++ +CE  F F W+L +  K  P+   T    L+E+
Sbjct:  326 WGMSIVCELWFAFSWLLDMLPKVNPVNRSTDLAVLKEK 363          
BLAST of EY666137 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.601e-26
Identity = 53/105 (50.48%), Postives = 75/105 (71.43%), Query Frame = 3
Query:  441 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD-SEPADSSSGELLQDWKNM 752
            +LP +D+FV TAD  +EPP++ VNTVLS+ A+DYP  KLA Y+SDD  S L FY+L EA++FAK WVPFCKK+NV+  +P  Y    +   DS++ E+ + ++ M
Sbjct:  107 DLPRLDVFVCTADPVIEPPLLVVNTVLSVTALDYPPEKLAVYLSDDGGSELTFYALTEAAEFAKTWVPFCKKFNVEPTSPAAYLSSKANCLDSAAEEVAKLYREM 211          

HSP 2 Score: 31.187 bits (69), Expect = 1.601e-26
Identity = 11/38 (28.95%), Postives = 19/38 (50.00%), Query Frame = 1
Query:  208 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 321
            WF+ F+ E  F   W++  + +W P+    +  RL  R
Sbjct:   66 WFVMFIVEIWFGLYWVVTQSSRWNPVWRFPFSDRLSRR 103          
BLAST of EY666137 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.321e-26
Identity = 56/118 (47.46%), Postives = 82/118 (69.49%), Query Frame = 3
Query:  441 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFP-DSEP-ADSSSGELLQDWKNMKKEYDKLTQNIN 788
            +LP +D+FV+TAD E EP ++T NT+LS+LA DYPV KLACYVSDD  + L F ++ EA+ FA LWVPFC+K+ ++ R P  YF    +P  +   G+ ++D + +K+EYD+    +N
Sbjct:  347 DLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYFNLKRDPFKNKVKGDFVKDRRRVKREYDEFKVRVN 464          
BLAST of EY666137 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.321e-26
Identity = 56/118 (47.46%), Postives = 82/118 (69.49%), Query Frame = 3
Query:  441 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFP-DSEP-ADSSSGELLQDWKNMKKEYDKLTQNIN 788
            +LP +D+FV+TAD E EP ++T NT+LS+LA DYPV KLACYVSDD  + L F ++ EA+ FA LWVPFC+K+ ++ R P  YF    +P  +   G+ ++D + +K+EYD+    +N
Sbjct:  347 DLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYFNLKRDPFKNKVKGDFVKDRRRVKREYDEFKVRVN 464          
The following BLAST results are available for this feature:
BLAST of EY666137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CESA8_ARATH8.162e-2946.34Cellulose synthase A catalytic subunit 8 [UDP-form... [more]
CESA9_ARATH2.341e-2848.33Probable cellulose synthase A catalytic subunit 9 ... [more]
CESA6_ARATH2.341e-2848.72Cellulose synthase A catalytic subunit 6 [UDP-form... [more]
CSLE2_ORYSJ3.064e-2850.00Cellulose synthase-like protein E2 OS=Oryza sativa... [more]
CESA5_ARATH5.166e-2847.46Cellulose synthase A catalytic subunit 5 [UDP-form... [more]
CSLD3_ARATH6.719e-2849.15Cellulose synthase-like protein D3 OS=Arabidopsis ... [more]
CSLD3_ORYSJ9.384e-2747.50Cellulose synthase-like protein D3 OS=Oryza sativa... [more]
CSLE1_ARATH1.601e-2650.48Cellulose synthase-like protein E1 OS=Arabidopsis ... [more]
CSLD1_ORYSJ3.321e-2647.46Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ORYSI3.321e-2647.46Cellulose synthase-like protein D1 OS=Oryza sativa... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-014-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666137 ID=EY666137; Name=EY666137; organism=Citrus sinensis; type=EST; length=846bp
CCACGCGTCCGCCGAAACACCAAAAATAAAAAAAACGAGTACTTGTTTTT
CAAGCTCATGGCCAATACAAAGTCGTCATGTCTCCCTCTATACGAAAAAG
TTTTTCATAAAAACACATATCATAGGGCTTTAGATGTTATCATCTTGTTC
CTTCTTCTATGTCTGCTCTTCTATCGGCTCTCAACGTTGAAGAATCATGG
ATTTGCTTGGTTTCTTGCTTTTCTATGTGAGTCTTGTTTTACTTTCATCT
GGATTCTCATCGTCAACTGCAAGTGGACTCCTTTGACCTACAAAACATAT
CCCCAACGTCTCCAAGAAAGGTAACAAATCAAATAACGTTAGCATTAATA
ATTTCCGCATCATTTGCAATTGTCTTTGTCATTTTGCAAGTTACTACACA
CACACACACACACACATGTGTACGACTCAACAGGATACAGGAGCTGCCCC
CAGTGGACATGTTTGTGACAACTGCTGATGCTGAACTCGAGCCGCCAATC
ATCACTGTAAACACAGTGCTGTCTTTGTTGGCAGTTGATTATCCAGTTCA
CAAGCTCGCTTGCTATGTTTCTGATGATGCCTGCTCACCTCTCAATTTCT
ACTCTCTTGTTGAAGCTTCTAAATTCGCTAAGCTTTGGGTTCCATTCTGT
AAAAAGTATAATGTTCAAATTAGAGCTCCCTTTAGATACTTCCCAGATAG
TGAGCCCGCCGATTCCAGTTCAGGGGAACTCCTGCAAGACTGGAAAAACA
TGAAGAAAGAATATGATAAACTTACCCAAAACATAAACATGCAAGCCAAA
AAATTTCTTTATTTGATTTAACAGGAAGAATGGATGTTTTCTCCCA
back to top