EY666137

Overview
NameEY666137
Unique NameEY666137
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666137 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21
Identity = 52/111 (46.85%), Postives = 75/111 (67.57%), Query Frame = 3
Query:  444 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPDSEPADSSSG--ELLQDWKNMKKEYDK 770
            LP +D+FVTTAD   EP + T+N VLS+LA DYPV + ACY+SDD+ + + + +LVE +KFA LWVPFC+K+ ++ R+P  YF    P+ + S   E   D + +  EYD+
Sbjct:  167 LPGIDVFVTTADPIDEPVLYTMNCVLSILAADYPVDRSACYLSDDSGALILYEALVETAKFATLWVPFCRKHCIEPRSPESYFELEAPSYTGSAPEEFKNDSRIVHLEYDE 277          
BLAST of EY666137 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21
Identity = 52/111 (46.85%), Postives = 75/111 (67.57%), Query Frame = 3
Query:  444 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPDSEPA--DSSSGELLQDWKNMKKEYDK 770
            LP +D+FVTTAD   EP + T+N VLS+LA DYPV + ACY+SDD+ + + + +LVE +KFA LWVPFC+K+ ++ R+P  YF    P+   S+  E   D + +  EYD+
Sbjct:  167 LPGIDVFVTTADPIDEPVLYTMNCVLSILAADYPVDRSACYLSDDSGALILYEALVETAKFATLWVPFCRKHCIEPRSPESYFELEAPSYTGSAQEEFKNDSRIVHLEYDE 277          
BLAST of EY666137 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 9.360e-21
Identity = 49/116 (42.24%), Postives = 73/116 (62.93%), Query Frame = 3
Query:  438 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPDSEPADSSSGELLQDWKNMKKEYDKLTQNI 785
            ++ P +D+F+ TAD   EPP++ VNT LS++A +YP  K++ YVSDD  S L  ++L+EA+KF+K W+PFCKK NVQ R+P  YF     + S   E      N+K  Y+ +   +
Sbjct:  115 EDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKKNNVQDRSPEVYFSSKLRSRSDEAE------NIKMMYEDMKSRV 224          
BLAST of EY666137 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.352e-19
Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 3
Query:  552 KLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPDSEPADSSSGELLQDWKNMKKEYDKLTQNI 785
            +LACYVSDD CSP+ +Y+L EA+ FA+ WVPFC+++ V +RAPFRYF  +     +  + L DW  MK EYDKL + I
Sbjct:  173 RLACYVSDDGCSPVTYYALREAAGFARTWVPFCRRHGVAVRAPFRYFASAPEFGPADRKFLDDWTFMKSEYDKLVRRI 250          
BLAST of EY666137 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.760e-19
Identity = 47/120 (39.17%), Postives = 74/120 (61.67%), Query Frame = 3
Query:  444 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF-----PDSEPADSSSGELLQDWKNMKKEYDKLTQNIN 788
            LP +D+F+ T D   EP + T+N++LS+LA DYP  + A Y+SDD  S  ++  L+E ++FA LWVPFC+K+ V+ RAP  YF     P + PA     E   D + +++EY++    ++
Sbjct:  151 LPGIDVFINTVDPVDEPMLYTMNSILSILATDYPADRHAAYLSDDGASLAHYEGLIETARFAALWVPFCRKHRVEPRAPESYFAAKAAPYAGPA--LPEEFFGDRRLVRREYEEFKARLD 268          
The following BLAST results are available for this feature:
BLAST of EY666137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLF3_ORYSJ3.217e-2146.85Probable mixed-linked glucan synthase 3 OS=Oryza s... [more]
CSLF3_ORYSI3.217e-2146.85Probable mixed-linked glucan synthase 3 OS=Oryza s... [more]
CSLG3_ARATH9.360e-2142.24Cellulose synthase-like protein G3 OS=Arabidopsis ... [more]
CSLH3_ORYSJ1.352e-1952.56Putative cellulose synthase-like protein H3 OS=Ory... [more]
CSLF9_ORYSJ8.760e-1939.17Probable mixed-linked glucan synthase 9 OS=Oryza s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-014-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666137 ID=EY666137; Name=EY666137; organism=Citrus sinensis; type=EST; length=846bp
CCACGCGTCCGCCGAAACACCAAAAATAAAAAAAACGAGTACTTGTTTTT
CAAGCTCATGGCCAATACAAAGTCGTCATGTCTCCCTCTATACGAAAAAG
TTTTTCATAAAAACACATATCATAGGGCTTTAGATGTTATCATCTTGTTC
CTTCTTCTATGTCTGCTCTTCTATCGGCTCTCAACGTTGAAGAATCATGG
ATTTGCTTGGTTTCTTGCTTTTCTATGTGAGTCTTGTTTTACTTTCATCT
GGATTCTCATCGTCAACTGCAAGTGGACTCCTTTGACCTACAAAACATAT
CCCCAACGTCTCCAAGAAAGGTAACAAATCAAATAACGTTAGCATTAATA
ATTTCCGCATCATTTGCAATTGTCTTTGTCATTTTGCAAGTTACTACACA
CACACACACACACACATGTGTACGACTCAACAGGATACAGGAGCTGCCCC
CAGTGGACATGTTTGTGACAACTGCTGATGCTGAACTCGAGCCGCCAATC
ATCACTGTAAACACAGTGCTGTCTTTGTTGGCAGTTGATTATCCAGTTCA
CAAGCTCGCTTGCTATGTTTCTGATGATGCCTGCTCACCTCTCAATTTCT
ACTCTCTTGTTGAAGCTTCTAAATTCGCTAAGCTTTGGGTTCCATTCTGT
AAAAAGTATAATGTTCAAATTAGAGCTCCCTTTAGATACTTCCCAGATAG
TGAGCCCGCCGATTCCAGTTCAGGGGAACTCCTGCAAGACTGGAAAAACA
TGAAGAAAGAATATGATAAACTTACCCAAAACATAAACATGCAAGCCAAA
AAATTTCTTTATTTGATTTAACAGGAAGAATGGATGTTTTCTCCCA
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