CN189003

Overview
NameCN189003
Unique NameCN189003
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH2_SCHMA (Ferritin-2 heavy chain OS=Schistosoma mansoni GN=SCM-2 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.772e-25
Identity = 66/163 (40.49%), Postives = 93/163 (57.06%), Query Frame = -1
Query:  347 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPP-SEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 832
            E AIN+QINVE   +Y Y A + YFDRD+++                       +YQN R G+V+   I  P  +EF   E      AM  AL +EK  ++ LL LH VA +NNDP +A+F+ESEFL EQ +AI + A Y+++ + VGKG G + FD++ L+E
Sbjct:   15 ENAINKQINVELQAAYDYMAFFTYFDRDDVSFPKAAEFFRKASHEEREHAEKLAKYQNKRVGRVQYSDINGPTKTEFSSLED-----AMNTALGMEKAVSKSLLELHEVASKNNDPALADFIESEFLHEQEDAIKQFADYLTETQRVGKGLGEYLFDKLTLNE 172          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRI2_RANCA (Ferritin, middle subunit OS=Rana catesbeiana PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 6.176e-25
Identity = 64/165 (38.79%), Postives = 95/165 (57.58%), Query Frame = -1
Query:  347 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHE 832
            EAA+N  +N+E   SY Y ++YA+FDRD++AL  +                 FM+YQN RGG+V L  I +P  +    E G+ L AM+ AL LEK  N+ LL LH +A    DP + +F+ESE+L EQV+ I +I  +++ L+ +G    G G + FD+  + E
Sbjct:   14 EAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMKYQNKRGGRVVLQDIKKPERD----EWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVDPHLCDFLESEYLEEQVKDIKRIGDFITNLKRLGLPENGMGEYLFDKHSVKE 174          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH_HORSE (Ferritin heavy chain OS=Equus caballus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 8.066e-25
Identity = 67/167 (40.12%), Postives = 94/167 (56.29%), Query Frame = -1
Query:  341 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHEGD 832
            EAAIN QIN+E + SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L AME AL LEK  NE LL LH +A   NDP + +F+E+ +L EQV+AI ++  +V+ LR +G    G   + FD+  L E D
Sbjct:   18 EAAINRQINLELHASYVYLSMSFYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DQDDWENGLKAMECALHLEKNVNESLLELHKLATDKNDPHLCDFLETHYLNEQVKAIKELGDHVTNLRRMGAPESGMAEYLFDKHTLGECD 180          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH_CHICK (Ferritin heavy chain OS=Gallus gallus GN=FTH PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 8.066e-25
Identity = 66/168 (39.29%), Postives = 94/168 (55.95%), Query Frame = -1
Query:  338 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGK---GHGLWHFDQMLLHEGDA 832
            EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L AME AL LEK  N+ LL LH +A   NDP + +F+E+ +L EQV+AI ++  +V+ LR +G    G   + FD+  L E D+
Sbjct:   17 EAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWENGLTAMECALHLEKNVNQSLLELHKLATEKNDPHLCDFIETHYLDEQVKAIKQLGDHVTNLRKMGAPKYGMAEYLFDKHTLGESDS 180          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH_MOUSE (Ferritin heavy chain OS=Mus musculus GN=Fth1 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.347e-24
Identity = 65/167 (38.92%), Postives = 92/167 (55.09%), Query Frame = -1
Query:  341 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHEGD 832
            EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +    L AME AL LEK  N+ LL LH +A   NDP + +F+E+ +L EQV++I ++  +V+ LR +G    G   + FD+  L  GD
Sbjct:   18 EAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETYYLSEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDKHTLGHGD 180          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH1_XENLA (Ferritin heavy chain 1 OS=Xenopus laevis PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.347e-24
Identity = 65/165 (39.39%), Postives = 95/165 (57.58%), Query Frame = -1
Query:  347 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHE 832
            EAAIN  +N+E   SYVY ++  YFDRD++AL  +                 F++YQN RGG+V L  I +P  +    E  + L AM+ AL LEK  N+ LL LH +A    DPQ+ +F+ESE+L EQV+A+ ++  Y++ L+ +G    G G + FD+  L E
Sbjct:   14 EAAINRMVNLEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRVVLQDIKKPERD----EWSNTLEAMQAALQLEKTVNQALLDLHKLASDKVDPQLCDFLESEYLEEQVKAMKELGDYITNLKRLGVPQNGMGEYLFDKHTLGE 174          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH_HUMAN (Ferritin heavy chain OS=Homo sapiens GN=FTH1 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 3.065e-24
Identity = 67/167 (40.12%), Postives = 94/167 (56.29%), Query Frame = -1
Query:  341 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHEGD 832
            EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P  + D  E G  L AME AL LEK  N+ LL LH +A   NDP + +F+E+ +L EQV+AI ++  +V+ LR +G    G   + FD+  L + D
Sbjct:   18 EAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP--DCDDWESG--LNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKAIKELGDHVTNLRKMGAPESGLAEYLFDKHTLGDSD 180          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH_TRIVU (Ferritin heavy chain OS=Trichosurus vulpecula GN=FTH1 PE=2 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 4.003e-24
Identity = 65/167 (38.92%), Postives = 92/167 (55.09%), Query Frame = -1
Query:  341 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHEGD 832
            EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +    L AME AL LEK  N+ LL LH +A   NDP + +F+E+ +L EQV+AI ++  +V+ LR +G    G   + FD+  L + D
Sbjct:   18 EAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIETHYLDEQVKAIKQLGDHVTNLRKMGAPDSGMAEYLFDKHTLGDSD 180          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH_RAT (Ferritin heavy chain OS=Rattus norvegicus GN=Fth1 PE=1 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 4.003e-24
Identity = 64/167 (38.32%), Postives = 91/167 (54.49%), Query Frame = -1
Query:  341 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG---KGHGLWHFDQMLLHEGD 832
            EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +    L AM  AL LEK  N+ LL LH +A   NDP + +F+E+ +L EQV++I ++  +V+ LR +G    G   + FD+  L  GD
Sbjct:   18 EAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMRCALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGAPESGMAEYLFDKHTLGHGD 180          
BLAST of CN189003 vs. ExPASy Swiss-Prot
Match: FRIH_BOVIN (Ferritin heavy chain OS=Bos taurus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 4.003e-24
Identity = 63/168 (37.50%), Postives = 93/168 (55.36%), Query Frame = -1
Query:  338 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMV---GKGHGLWHFDQMLLHEGDA 832
            EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L AME AL LE+  N+ LL LH +A   NDP + +F+E+ +L EQVEAI ++  +++ LR +   G G   + FD+  L   ++
Sbjct:   18 EAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAERLMKLQNQRGGRIFLQDIKKP----DRDDWENGLTAMECALCLERSVNQSLLELHKLATEKNDPHLCDFIETHYLNEQVEAIKELGDHITNLRKMGAPGSGMAEYLFDKHTLGHSES 181          
The following BLAST results are available for this feature:
BLAST of CN189003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FRIH2_SCHMA2.772e-2540.49Ferritin-2 heavy chain OS=Schistosoma mansoni GN=S... [more]
FRI2_RANCA6.176e-2538.79Ferritin, middle subunit OS=Rana catesbeiana PE=1 ... [more]
FRIH_HORSE8.066e-2540.12Ferritin heavy chain OS=Equus caballus GN=FTH1 PE=... [more]
FRIH_CHICK8.066e-2539.29Ferritin heavy chain OS=Gallus gallus GN=FTH PE=2 ... [more]
FRIH_MOUSE2.347e-2438.92Ferritin heavy chain OS=Mus musculus GN=Fth1 PE=1 ... [more]
FRIH1_XENLA2.347e-2439.39Ferritin heavy chain 1 OS=Xenopus laevis PE=2 SV=2[more]
FRIH_HUMAN3.065e-2440.12Ferritin heavy chain OS=Homo sapiens GN=FTH1 PE=1 ... [more]
FRIH_TRIVU4.003e-2438.92Ferritin heavy chain OS=Trichosurus vulpecula GN=F... [more]
FRIH_RAT4.003e-2438.32Ferritin heavy chain OS=Rattus norvegicus GN=Fth1 ... [more]
FRIH_BOVIN4.003e-2437.50Ferritin heavy chain OS=Bos taurus GN=FTH1 PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001C17_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001C17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189003 ID=CN189003; Name=CN189003; organism=Citrus sinensis; type=EST; length=832bp
TTTTTTTTTTTTGCGAACAGAACTTTTATTGAACAACTTAATTATATTTA
TACAATCAGAAGATGGATTTGGTGCTCTGCTTAAACTATTAGATCCCTTC
ACACAGTCTGTTACTAAATAAAGAAAAAGCACCATCAAAAAGACTATCTA
AATGCGACCACACTAATATGATAAAGCAAGGAGGCTATTGAGTATTAACT
TTGTAGGACTTAACACTGTTTCAGCTTATTTTTTGTCAACACACTCAACC
TCCTGTGGCAGAGATACTTCAGAACATTTGGCAGAAAAGAGTTGACTAAA
GCACAAAGAAATGTAACAATATGGTTCTTCATCATGCAGCATCACCCTCG
TGGAGAAGCATTTGATCGAAGTGCCATAATCCGTGGCCTTTCCCAACCAT
CCTCAGTTGAGAAACATATTTTGCGATCTTGTTAATTGCTTCAACCTGCT
CACCCAAAAATTCACTCTCGACAAACTCTGCCATTTGGGGATCATTGTTT
CTATCCGCCACACTGTGCAGGCTCAGAAGCTTCTCGTTTGTTAGCTTCTC
CAGGGACAATGCTAGTTCCATTGCATACAAGGCATCCCCTTTCTCCGCAT
GATCAAACTCCGAAGGGGGCTGCATTATGGAGTGCAGTTTTACTTTTCCA
CCGCGCAAGTTCTGATACTCCATAAACTTCTCAGCATGTTCCCTTTCTTC
TTCACTGGACTCCTTGAAAAATTTGGCAAGGCCTCTCAGAGCAATATTAT
CCCGATCAAAGTACGCATACAGGGCATGGTACACGTATGAGACATTATAT
TCCACATTGATCTGCTCGTTGATAGCGGCCTC
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