CN189000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189000 vs. ExPASy Swiss-Prot
Match: CYC23_RHOCR (Cytochrome c2 OS=Rhodoplanes cryptolactis PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.073e-13 Identity = 41/88 (46.59%), Postives = 51/88 (57.95%), Query Frame = 1 Query: 133 KCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNW-EEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLK 393 +C CH VE G GP+L GLFG + G PG+ YS A+ A +E L YL +PK +PG KMVF GLK P D ++AYLK Sbjct: 9 QCQACHKVEAGEDGV-GPSLFGLFGHKLGQAPGFKYSEAHLKFAQQTVDEPFLTKYLADPKASLPGNKMVFAGLKNPDDVKAVLAYLK 95
BLAST of CN189000 vs. ExPASy Swiss-Prot
Match: CY550_AQUIT (Cytochrome c-550 OS=Aquaspirillum itersonii PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.448e-12 Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = 1 Query: 97 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVN---WEEKTLYDYLLNPKKYIPG--------TKMVFPGLKKPQDRADLIAYL 390 G+A G + K+ C CH+ E+G KQGPNL G+ R G G++YS + K A W+ TL DY+ +P ++ KM F L KP +RAD+IAYL Sbjct: 1 GDAAKGANVAKS-CGTCHSFEQGGAKKQGPNLFGITTRGPGKAEGFNYSPSYKAAAAKGFAWDAATLQDYITDPTAFLSNKTGDAAARDKMTFK-LAKPDERADVIAYL 107
BLAST of CN189000 vs. ExPASy Swiss-Prot
Match: CYC22_RHOCE (Cytochrome c2 iso-2 OS=Rhodospirillum centenum PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.003e-11 Identity = 43/117 (36.75%), Postives = 60/117 (51.28%), Query Frame = 1 Query: 97 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANK---NMAVNWEEKTLYDYLLNPKKYI--------------PGTKMVFPGLKKPQDRADLIAYLKQ 396 G+ GE +FK KC CH V A + GP L G+ RQ+GT PG++YSA N ++W + + YL +P ++ TKMVF L Q+R D++AYLKQ Sbjct: 3 GDPAKGEAVFK-KCMACHRVGPDAKNLVGPALTGVIDRQAGTAPGFNYSAINHAAGEAGLHWTPENIIAYLPDPNAFLRKFLADAGHAEQAKGSTKMVFK-LPDEQERKDVVAYLKQ 117
BLAST of CN189000 vs. ExPASy Swiss-Prot
Match: CYC21_RHOCE (Cytochrome c2 iso-1 OS=Rhodospirillum centenum PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.235e-11 Identity = 42/116 (36.21%), Postives = 59/116 (50.86%), Query Frame = 1 Query: 97 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANK---NMAVNWEEKTLYDYLLNPKKYI--------------PGTKMVFPGLKKPQDRADLIAYLK 393 G+ GE +FK KC CH + A + GP L G+ GRQ+G PG+SYSA N ++W + + YL +P ++ TKMVF L Q+R D++AYLK Sbjct: 3 GDPVKGEAVFK-KCMACHRIGPDAKNLVGPVLTGVVGRQAGVAPGFSYSALNHAAGEAGLHWTAENIMAYLPDPNAFLRKFVTDAGNPEAAKGSTKMVFK-LPNEQERKDVVAYLK 116 The following BLAST results are available for this feature:
BLAST of CN189000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189000 ID=CN189000; Name=CN189000; organism=Citrus sinensis; type=EST; length=612bpback to top |