CN188991

Overview
NameCN188991
Unique NameCN188991
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length565
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: IAAT_MAIZE (Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.964e-19
Identity = 51/120 (42.50%), Postives = 65/120 (54.17%), Query Frame = 2
Query:  206 GPWKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPS*LAIKGSDGNVIACNSACASF 565
            G    R WART    D+SG+ +C T DCG G V C G G  P  +L E+ +      DFFD+S++DGFN+P S  P GGSG +     C  +VNA CP+ L   G       CN+AC  F
Sbjct:   39 GTTAARIWARTGCQFDASGRGSCRTGDCG-GVVQCTGYGRAPN-TLAEYALKQFNNLDFFDISILDGFNVPYSFLPDGGSGCS-RGPRCAVDVNARCPAELRQDG------VCNNACPVF 149          

HSP 2 Score: 26.9498 bits (58), Expect = 1.964e-19
Identity = 10/27 (37.04%), Postives = 14/27 (51.85%), Query Frame = 1
Query:   73 ATITFTNNCQNTIWPGALTADGGAQLS 153
            A  T  N C  T+W  ++   GG QL+
Sbjct:    1 AVFTVVNQCPFTVWAASVPVGGGRQLN 27          
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: TLP_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 7.347e-19
Identity = 39/89 (43.82%), Postives = 54/89 (60.67%), Query Frame = 2
Query:  206 GPWKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSC 472
            G   GR W RT  S D SG+ +CAT DC +G ++C  +G  P  +L EFTI  +  QDF+DLS++DG+N+ +S +   G   TC  S C
Sbjct:   65 GTSSGRVWGRTGCSFDGSGRGSCATGDC-AGALSCTLSGQKP-LTLAEFTIGGS--QDFYDLSVIDGYNVAMSFSCSSGVTVTCRDSRC 149          

HSP 2 Score: 41.2022 bits (95), Expect = 7.347e-19
Identity = 18/42 (42.86%), Postives = 22/42 (52.38%), Query Frame = 1
Query:   28 IFCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLS 153
            +  L  +    GA+ AT T TN C  T+WP A    GG QLS
Sbjct:   12 VVVLVATLAAGGANAATFTITNRCSFTVWPAATPVGGGVQLS 53          
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.700e-18
Identity = 44/120 (36.67%), Postives = 61/120 (50.83%), Query Frame = 2
Query:  206 GPWKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPS*LAIKGSDGNVIACNSACASF 565
            G    R W RT  + D +G+  C T DCG G + C G G  PP +L E+ +      DF+D+S++DGFN+P+S  P       C    C AN+N  CP  L + G       CN+ C +F
Sbjct:   61 GTKMARIWGRTNCNFDGAGRGWCQTGDCG-GVLECKGWGK-PPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTNPGPGKCHPIQCVANINGECPGSLRVPG------GCNNPCTTF 172          

HSP 2 Score: 25.7942 bits (55), Expect = 2.700e-18
Identity = 18/48 (37.50%), Postives = 22/48 (45.83%), Query Frame = 1
Query:   34 CLTFSFLISGAHLATITFTN---------NCQNTIWPGALTADGGAQL 150
            CL F FL     LA +T+TN         NC  T+W  A    GG +L
Sbjct:    7 CLVF-FL-----LAFVTYTNASGVFEVHNNCPYTVWAAATPIGGGRRL 48          
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.514e-18
Identity = 47/126 (37.30%), Postives = 66/126 (52.38%), Query Frame = 2
Query:  188 KLSMLRGPWKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPS*LAIKGSDGNVIACNSACASF 565
            +L +  G    R W RT  + DSSG+  C T DC SG + C G G  PP +L E+ +      DF+D+SLVDGFN+P+  +P   + + C    C A++N  CP+ L   G       CN+ C  F
Sbjct:   54 RLDVAAGTKMARIWGRTNCNFDSSGRGRCQTGDC-SGGLQCTGWGQ-PPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSP---TSSNCHRILCTADINGQCPNVLRAPG------GCNNPCTVF 168          

HSP 2 Score: 26.9498 bits (58), Expect = 3.514e-18
Identity = 15/40 (37.50%), Postives = 19/40 (47.50%), Query Frame = 1
Query:   31 FCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQL 150
            F  +   LIS A  AT    N C  T+W  A +  GG +L
Sbjct:    9 FIFSALLLISTATAATFEILNQCSYTVW-AAASPGGGRRL 47          
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.536e-18
Identity = 49/116 (42.24%), Postives = 63/116 (54.31%), Query Frame = 2
Query:  221 RFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTS-SCKANVNAVCPS*LAIKGSDGNVIACNSACASF 565
            R WART  + D SG+  C T DCG G + C   GA PP +L E+ +      DFFD+SLVDGFN+P+  +P       CT   SC A++N  CPS L  +G       CN+ C  F
Sbjct:   44 RVWARTGCNFDGSGRGGCQTGDCG-GVLDCKAYGA-PPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSPTSNG---CTRGISCTADINGQCPSELKTQG------GCNNPCTVF 148          

HSP 2 Score: 27.335 bits (59), Expect = 3.536e-18
Identity = 10/27 (37.04%), Postives = 14/27 (51.85%), Query Frame = 1
Query:   73 ATITFTNNCQNTIWPGALTADGGAQLS 153
            A    TN C  T+W  ++   GG QL+
Sbjct:    1 ARFEITNRCTYTVWAASVPVGGGVQLN 27          
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: TLP_WHEAT (Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.559e-18
Identity = 43/109 (39.45%), Postives = 59/109 (54.13%), Query Frame = 2
Query:  206 GPWKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPS*LAIKGSDGN 532
            G   GR WART  S +  G  +C T DCG GQ++C+ +G  PPA+L E+TI     QDF+D+S++DGFNL +  +   G    C   SC        P+ +A     GN
Sbjct:   59 GTQAGRIWARTGCSFNG-GSGSCQTGDCG-GQLSCSLSGR-PPATLAEYTIGGGSTQDFYDISVIDGFNLAMDFSCSTGDALQCRDPSCPPPQAYQHPNDVATHACSGN 164          

HSP 2 Score: 36.1946 bits (82), Expect = 3.559e-18
Identity = 17/46 (36.96%), Postives = 21/46 (45.65%), Query Frame = 1
Query:   13 MNTRAIFCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQL 150
            M T  +  L  +   +GA  AT    NNC  TIWP  +   GG  L
Sbjct:    1 MATSPVLFLLLAVFAAGASAATFNIKNNCGFTIWPAGIPVGGGFAL 46          
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.565e-18
Identity = 44/120 (36.67%), Postives = 61/120 (50.83%), Query Frame = 2
Query:  206 GPWKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPS*LAIKGSDGNVIACNSACASF 565
            G    R W RT  + D +G+  C T DCG G + C G G  PP +L E+ +      DF+D+S++DGFN+P+S  P       C    C AN+N  CP  L + G       CN+ C +F
Sbjct:   61 GTKMARIWGRTNCNFDGAGRGWCQTGDCG-GVLECKGWGK-PPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG------GCNNPCTTF 172          

HSP 2 Score: 25.7942 bits (55), Expect = 4.565e-18
Identity = 13/36 (36.11%), Postives = 17/36 (47.22%), Query Frame = 1
Query:   70 LATITFT---------NNCQNTIWPGALTADGGAQL 150
            LA +T+T         NNC  T+W  A    GG +L
Sbjct:   13 LAFVTYTYASGVFEVHNNCPYTVWAAATPVGGGRRL 48          
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 7.743e-18
Identity = 48/122 (39.34%), Postives = 63/122 (51.64%), Query Frame = 2
Query:  206 GPWKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPS*LAIKGSDGN---VIACNSACAS 562
            G  + R W RT  + D SG+  C T DC +G + C G G  PP +L EF +     QDF D+SLVDGFN+P+  +P  G    C    C A +N  CP+ L  +G   N   VI  N  C +
Sbjct:   63 GTVQARIWGRTNCNFDGSGRGNCETGDC-NGMLECQGYGK-PPNTLAEFALN-QPNQDFVDISLVDGFNIPMEFSPTNGG---CRNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEFCCT 178          

HSP 2 Score: 28.1054 bits (61), Expect = 7.743e-18
Identity = 12/35 (34.29%), Postives = 18/35 (51.43%), Query Frame = 1
Query:   49 FLISGAHLATITFTNNCQNTIWPGALTADGGAQLS 153
            + ++  H AT    N C  T+W  A +  GG QL+
Sbjct:   18 YFVAVTHAATFDIVNQCTYTVW-AAASPGGGRQLN 51          
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.069e-16
Identity = 47/122 (38.52%), Postives = 62/122 (50.82%), Query Frame = 2
Query:  206 GPWKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPS*LAIKGSDGN---VIACNSACAS 562
            G  + R W RT  + D SG+  C T DC +G + C G G  P  +L EF +     QDF D+SLVDGFN+P+  +P  G    C    C A +N  CP+ L  +G   N   VI  N  C +
Sbjct:   63 GTVQARIWGRTNCNFDGSGRGNCETGDC-NGMLECQGYGKAPN-TLAEFALN-QPNQDFVDISLVDGFNIPMEFSPTNGG---CRNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEYCCT 178          

HSP 2 Score: 26.9498 bits (58), Expect = 1.069e-16
Identity = 11/38 (28.95%), Postives = 19/38 (50.00%), Query Frame = 1
Query:   49 FLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENG 162
            + ++  H AT    N C  T+W  A  + GG +  ++G
Sbjct:   18 YFVAVTHAATFDIVNKCTYTVW--AAASPGGGRRLDSG 53          
BLAST of CN188991 vs. ExPASy Swiss-Prot
Match: RST1_AVESA (Thaumatin-like pathogenesis-related protein 1 OS=Avena sativa GN=RASTL-1 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 5.219e-16
Identity = 35/98 (35.71%), Postives = 58/98 (59.18%), Query Frame = 2
Query:  179 KQKKLSMLRGPWKGRFWARTQ*SKDSSGKFTCATADCGSGQVTCNGNGATPPASLVEFTIAANKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSC 472
            +   +++  G   GR W RT  S ++ G+ +CAT DC +G ++C  +G   PA+L E+TI  +  QDF+D+S++DGFNL +  +   G    C  ++C
Sbjct:   51 QSSNINVPAGTSAGRIWGRTGCSFNN-GRGSCATGDC-AGALSCTLSGQ--PATLAEYTIGGS--QDFYDISVIDGFNLAMDFSCSTGVALKCRDANC 142          

HSP 2 Score: 41.2022 bits (95), Expect = 5.219e-16
Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = 1
Query:   10 MMNTRAIFCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLS 153
            M  + A+  L  +   +GA  AT   TNNC  T+WP  +   GG QL+
Sbjct:    1 MATSSAVLFLLLAVFAAGASAATFRITNNCGFTVWPAGIPVGGGFQLN 48          
The following BLAST results are available for this feature:
BLAST of CN188991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
IAAT_MAIZE1.964e-1942.50Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 S... [more]
TLP_ORYSJ7.347e-1943.82Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
OS35_SOLCO2.700e-1836.67Osmotin-like protein OSML15 OS=Solanum commersonii... [more]
OSL3_ARATH3.514e-1837.30Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
P21_SOYBN3.536e-1842.24Protein P21 OS=Glycine max PE=1 SV=1[more]
TLP_WHEAT3.559e-1839.45Thaumatin-like protein PWIR2 OS=Triticum aestivum ... [more]
OLPA_TOBAC4.565e-1836.67Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
PRR2_TOBAC7.743e-1839.34Pathogenesis-related protein R minor form OS=Nicot... [more]
PRR1_TOBAC1.069e-1638.52Pathogenesis-related protein R major form OS=Nicot... [more]
RST1_AVESA5.219e-1635.71Thaumatin-like pathogenesis-related protein 1 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001C09_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188991 ID=CN188991; Name=CN188991; organism=Citrus sinensis; type=EST; length=565bp
TCAGCTTTCATGATGAATACCCGAGCAATATTTTGCCTTACCTTCTCCTT
CCTCATCTCTGGGGCGCACTTGGCAACGATTACGTTCACAAACAACTGCC
AAAACACTATTTGGCCGGGAGCCCTAACCGCAGATGGAGGTGCTCAGCTG
TCAGAAAATGGGTTCTAGTTACCATCCAAAGCAAAAAAAACTCTCGATGT
TGAGGGGGCCTTGGAAAGGCCGTTTCTGGGCTCGAACACAGTGATCTAAA
GATTCCTCCGGCAAGTTCACTTGCGCCACTGCAGATTGTGGCTCAGGCCA
AGTCACATGCAACGGTAATGGTGCAACCCCACCGGCATCTCTCGTGGAAT
TCACAATTGCTGCAAACAAAGGACAAGATTTCTTCGATCTTAGCCTCGTT
GATGGCTTTAACTTGCCTCTTTCAGTTGCCCCACAAGGCGGTTCTGGAGC
TACTTGCACGACATCTAGCTGTAAAGCCAACGTGAATGCTGTTTGTCCAT
CATAGCTAGCAATCAAAGGATCCGATGGGAATGTTATTGCTTGCAACAGT
GCATGTGCATCTTTT
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