CN188989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188989 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSI (Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.754e-35 Identity = 60/103 (58.25%), Postives = 81/103 (78.64%), Query Frame = 1 Query: 82 VKRGPWSPGEDLRLITFIQKHGHENWRALPKQAGLLRCGKSCRLRWINYLRPDVKRGNFTQEEEDTIIRLHESLGNRWSKIASQLPGRTDNEIKNVWNTHLKK 390 +K+GPW+ ED L+ +++KHG NW A+ K GL RCGKSCRLRW N+LRP++K+G FT EEE II+LH +GN+W+++A+ LPGRTDNEIKN WNT +K+ Sbjct: 40 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 142
BLAST of CN188989 vs. ExPASy Swiss-Prot
Match: MYB21_ARATH (Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.814e-35 Identity = 67/113 (59.29%), Postives = 82/113 (72.57%), Query Frame = 1 Query: 73 KSQVKRGPWSPGEDLRLITFIQKHGHENWRALPKQAGLLRCGKSCRLRWINYLRPDVKRGNFTQEEEDTIIRLHESLGNRWSKIASQLPGRTDNEIKNVWNTHLKKRLSFRDV 411 +++V++GPW+ EDL LI +I HG W +L K AGL R GKSCRLRW+NYLRPDV+RGN T EE+ I+ LH GNRWSKIA LPGRTDNEIKN W T ++K + DV Sbjct: 17 EAEVRKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLIIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKYIKQSDV 129
BLAST of CN188989 vs. ExPASy Swiss-Prot
Match: MYB05_ANTMA (Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.729e-34 Identity = 67/119 (56.30%), Postives = 83/119 (69.75%), Query Frame = 1 Query: 55 RAPCCDKS-QVKRGPWSPGEDLRLITFIQKHGHENWRALPKQAGLLRCGKSCRLRWINYLRPDVKRGNFTQEEEDTIIRLHESLGNRWSKIASQLPGRTDNEIKNVWNTHLKKRLSFRD 408 + PC + +V++GPW+ EDL LI +I HG W +L + AGL R GKSCRLRW+NYLRPDV+RGN T EE+ I+ LH GNRWSKIA LPGRTDNEIKN W T ++K + D Sbjct: 3 KKPCNSQDVEVRKGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKTLPGRTDNEIKNYWRTRIQKHMEQGD 121
BLAST of CN188989 vs. ExPASy Swiss-Prot
Match: GL1_ARATH (Trichome differentiation protein GL1 OS=Arabidopsis thaliana GN=GL1 PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34 Identity = 61/109 (55.96%), Postives = 82/109 (75.23%), Query Frame = 1 Query: 70 DKSQVKRGPWSPGEDLRLITFIQKHGHENWRALPKQAGLLRCGKSCRLRWINYLRPDVKRGNFTQEEEDTIIRLHESLGNRWSKIASQLPGRTDNEIKNVWNTHLKKRL 396 + + K+G W+ ED L+ ++ HG W + ++ GL RCGKSCRLRW+NYL P+V +GNFT++EED IIRLH+ LGNRWS IA ++PGRTDN++KN WNTHL K+L Sbjct: 10 ENQEYKKGLWTVEEDNILMDYVLNHGTGQWNRIVRKTGLKRCGKSCRLRWMNYLSPNVNKGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 118
BLAST of CN188989 vs. ExPASy Swiss-Prot
Match: GL1_ARALY (Trichome differentiation protein GL1 OS=Arabidopsis lyrata GN=GL1 PE=3 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34 Identity = 61/109 (55.96%), Postives = 82/109 (75.23%), Query Frame = 1 Query: 70 DKSQVKRGPWSPGEDLRLITFIQKHGHENWRALPKQAGLLRCGKSCRLRWINYLRPDVKRGNFTQEEEDTIIRLHESLGNRWSKIASQLPGRTDNEIKNVWNTHLKKRL 396 + + K+G W+ ED L+ ++ HG W + ++ GL RCGKSCRLRW+NYL P+V +GNFT++EED IIRLH+ LGNRWS IA ++PGRTDN++KN WNTHL K+L Sbjct: 10 ENQEYKKGLWTVEEDNILMDYVLNHGTGQWNRIVRKTGLKRCGKSCRLRWMNYLSPNVNKGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 118
BLAST of CN188989 vs. ExPASy Swiss-Prot
Match: MYB40_ANTMA (Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.417e-33 Identity = 67/116 (57.76%), Postives = 81/116 (69.83%), Query Frame = 1 Query: 55 RAPCCDKS-QVKRGPWSPGEDLRLITFIQKHGHENWRALPKQAGLLRCGKSCRLRWINYLRPDVKRGNFTQEEEDTIIRLHESLGNRWSKIASQLPGRTDNEIKNVWN-THLKKRL 396 + PC +V++GPW+ EDL LI FI HG W + + AGL R GKSCRLRW+NYLRPDV+RGN T EE+ I+ LH GNRWSKIA LPGRTDNEIKN WN T ++K + Sbjct: 3 KKPCNSHDVEVRKGPWTMEEDLILINFISNHGEGVWNTIARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWNRTRIQKHI 118
BLAST of CN188989 vs. ExPASy Swiss-Prot
Match: LAF1_ARATH (Transcription factor LAF1 OS=Arabidopsis thaliana GN=LAF1 PE=1 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 1.200e-32 Identity = 63/103 (61.17%), Postives = 79/103 (76.70%), Query Frame = 1 Query: 85 KRGPWSPGEDLRLITFIQKHGHENWRALPKQAGLLRCGKSCRLRWINYLRPDVKRGNFTQEEEDTIIRLHESLGNRWSKIASQLPGRTDNEIKNVWNTHLKKR 393 ++G WSP ED +L +FI +GH W +P +AGL R GKSCRLRWINYLRP +KR + EEE+TI+ H SLGN+WS+IA LPGRTDNEIKN W++HLKK+ Sbjct: 11 RKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRLRWINYLRPGLKRDMISAEEEETILTFHSSLGNKWSQIAKFLPGRTDNEIKNYWHSHLKKK 113
BLAST of CN188989 vs. ExPASy Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 8.598e-31 Identity = 56/107 (52.34%), Postives = 75/107 (70.09%), Query Frame = 1 Query: 73 KSQVKRGPWSPGEDLRLITFIQKHGHENWRALPKQAGLLRCGKSCRLRWINYLRPDVKRGNFTQEEEDTIIRLHESLGNRWSKIASQLPGRTDNEIKNVWNTHLKKR 393 + + ++GPW+ ED+ L+ F+ G W + K +GL R GKSCRLRW+NYL P +KRG T +EE ++ LH GNRWSKIA +LPGRTDNEIKN W TH++K+ Sbjct: 5 QEEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKK 111
BLAST of CN188989 vs. ExPASy Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.123e-30 Identity = 56/103 (54.37%), Postives = 73/103 (70.87%), Query Frame = 1 Query: 85 KRGPWSPGEDLRLITFIQKHGHENWRALPKQAGLLRCGKSCRLRWINYLRPDVKRGNFTQEEEDTIIRLHESLGNRWSKIASQLPGRTDNEIKNVWNTHLKKR 393 ++GPW+ ED+ L+ F+ G W + K +GL R GKSCRLRW+NYL P +KRG T +EE ++ LH GNRWSKIA +LPGRTDNEIKN W TH++K+ Sbjct: 8 RKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKK 110
BLAST of CN188989 vs. ExPASy Swiss-Prot
Match: MY114_ARATH (Transcription factor MYB114 OS=Arabidopsis thaliana GN=MYB114 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.467e-30 Identity = 57/104 (54.81%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 82 VKRGPWSPGEDLRLITFIQKHGHENWRALPKQAGLLRCGKSCRLRWINYLRPDVKRGNFTQEEEDTIIRLHESLGNRWSKIASQLPGRTDNEIKNVWNTHLKKR 393 +++G W+ ED L I K+G W +P +AGL RC KSCRLRW+NYL+P +KRG F+ +E D ++RLH+ LGNRWS IA +LPGRT N++KN WNTHL K+ Sbjct: 8 LRKGAWTAEEDSLLRQCIGKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGKFSSDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111 The following BLAST results are available for this feature:
BLAST of CN188989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188989 ID=CN188989; Name=CN188989; organism=Citrus sinensis; type=EST; length=767bpback to top |