CN188989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188989 vs. ExPASy Swiss-Prot
Match: AS1_ARATH (Transcription factor AS1 OS=Arabidopsis thaliana GN=AS1 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.685e-16 Identity = 40/105 (38.10%), Postives = 62/105 (59.05%), Query Frame = 1 Query: 85 KRGPWSPGEDLRLITFIQKHGHENWRALPKQAG--LLRCGKSCRLRWINYLRPDVKRGNFTQEEEDTIIRLHESLGNRWSKIASQLPGRTDNEIKNVWNTHLKKR 393 +R WS ED L ++++ G W + ++ L R KSC RW NYL+P +K+G+ T+EE+ +IRL E GN+W KIA+++PGRT + W +K+ Sbjct: 3 ERQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ 107
BLAST of CN188989 vs. ExPASy Swiss-Prot
Match: MYBM_DICDI (Myb-like protein M OS=Dictyostelium discoideum GN=mybM PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.397e-11 Identity = 33/121 (27.27%), Postives = 65/121 (53.72%), Query Frame = 1 Query: 37 SQMGKGRAPCCDKSQVKRGP--WSPGEDLRLITFIQKHGHENWRALPKQAGLLRCGKSCRLRWINYLRPDVKRGNFTQEEEDTIIRLHESLGNRWSKIASQLPGRTDNEIKNVWNTHLKKR 393 S+ G+G+ ++ ++R P W+ ED +L + +G + W+ + + G + G C W L PD+++G + ++EE+ ++RL G+ W KIA ++ RTD + + + L+ R Sbjct: 52 SKRGRGQI----QNGIRRSPNKWTEEEDQKLFQLVSIYGEKKWKRISAEMGGQKTGAQCAQHWKRVLSPDIRKGPWDEDEEELLLRLVNQHGSSWKKIAKRICKRTDIQCRYQYLKSLQSR 168
BLAST of CN188989 vs. ExPASy Swiss-Prot
Match: SNPC4_HUMAN (snRNA-activating protein complex subunit 4 OS=Homo sapiens GN=SNAPC4 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.567e-11 Identity = 34/109 (31.19%), Postives = 62/109 (56.88%), Query Frame = 1 Query: 82 VKRGPWSPGEDLRLITFIQKHGHENWRALPKQAGLLRCGKSCRLRWINYLRPDVKRGNFTQEEEDTIIRLHESLG-NRWSKIASQLPGRTDNEIKNVWNTHLKKRLSFR 405 +K+G W+P ED +L+ + K+G ++W + ++ R CR R++ L +K+G + +EE+ +I L E G W+KIAS+LP R+ ++ + W + K+ R Sbjct: 399 LKKGYWAPEEDAKLLQAVAKYGEQDWFKIREEVP-GRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIASELPHRSGSQCLSKWKIMMGKKQGLR 506 The following BLAST results are available for this feature:
BLAST of CN188989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188989 ID=CN188989; Name=CN188989; organism=Citrus sinensis; type=EST; length=767bpback to top |