CN188981

Overview
NameCN188981
Unique NameCN188981
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13203 contig Csv1_Contig13203:57..763. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: CP4A7_RABIT (Cytochrome P450 4A7 OS=Oryctolagus cuniculus GN=CYP4A7 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16
Identity = 56/174 (32.18%), Postives = 90/174 (51.72%), Query Frame = -3
Query:  184 HQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 699
            H + Q R R+E+  + G+     ++ L+ +    M + E LRLYPPV  + S+     T     +LP G+ I L +  +H +P++W +  V F P RFA G   +A++  ++ PF+ G R C+G+ FA+ E K+A  + L  +     P+ V  P     L  + G  L LRKL
Sbjct:  341 HPEHQHRCREEIQGLLGDGASITWEHLDKMPYTTMCIKEALRLYPPVPGVGSKLSSPVTFPDGRSLPKGIIITLSIYGLHHNPKVWPNPEV-FDPSRFAPG---SARHSHAFLPFSGGSRNCIGKQFAMNELKVAVALTLVRFELLPDPTRVPIPITRLVLKSKNGIHLRLRKL 510          
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: CP4A6_RABIT (Cytochrome P450 4A6 OS=Oryctolagus cuniculus GN=CYP4A6 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16
Identity = 58/176 (32.95%), Postives = 90/176 (51.14%), Query Frame = -3
Query:  184 HQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVP--TLHPELGTQLILRKL 699
            H + Q R R+E+  + G+     ++ L+ +    M + E LRLYPPV  + R +       +  +LP GV + L +  +H +P++W +  V F P  FA G   +A++  ++ PF+ GPR C+G+ FA+ E K+A  + L    FEL P     P   P   L    G  L LRKL
Sbjct:  340 HPEHQHRCREEIQGLLGDGASITWEHLDQMPYTTMCIKEALRLYPPVPGVGRQLSSPVTFPDGRSLPKGVIVTLSIYALHHNPKVWPNPEV-FDPFPFAPG---SARHSHAFLPFSGGPRNCIGKQFAMNELKVAVALTL--VRFELLPDPKRVPDQKPRLVLKSSNGIHLRLRKL 509          
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: CP4A4_RABIT (Cytochrome P450 4A4 OS=Oryctolagus cuniculus GN=CYP4A4 PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16
Identity = 55/174 (31.61%), Postives = 91/174 (52.30%), Query Frame = -3
Query:  184 HQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 699
            H + Q R R+E+  + G+     ++ L+ +    M + E LRLYPPV  ++R + K     +  +LP GV + L +  +H +P++W +  V F P RFA     +A +  ++ PF+ G R C+G+ FA+ E K+A  + L  +     P+ +  P A   L  + G  L LRKL
Sbjct:  340 HPEHQHRCREEIQGLLGDGASITWEHLDQMPYTTMCIKEALRLYPPVPSVTRQLSKPVTFPDGRSLPKGVILFLSIYGLHYNPKVWQNPEV-FDPFRFAPD---SAYHSHAFLPFSGGARNCIGKQFAMRELKVAVALTLVRFELLPDPTRIPIPIARVVLKSKNGIHLRLRKL 509          
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: CP46A_MOUSE (Cholesterol 24-hydroxylase OS=Mus musculus GN=Cyp46a1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16
Identity = 54/164 (32.93%), Postives = 82/164 (50.00%), Query Frame = -3
Query:  217 SKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHP 705
            S+  +   R + EV +V G+ +  DY+ L  L+ +  +L E LRLYPP     R + +ET +  + +P    + L    V    + + +D + F P+RF  G   A K + +YFPF+LG R C+GQ FA +E K+    +LQ   F L P          TL P
Sbjct:  319 SRQPEIVARLQAEVDEVVGSKRHLDYEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPL-LFSTYVMGRMDTYFEDPLTFNPDRFGPG---APKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRIEFRLVPGQRFGLQEQATLKP 478          
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: CP4X1_HUMAN (Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15
Identity = 58/173 (33.53%), Postives = 89/173 (51.45%), Query Frame = -3
Query:  184 QERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPT---LHPELGTQLILRKL 687
            QER R+EV  + G+     +D L  +    M + E  RL P V  +SR + K  T     TLPAG+ + L +  +H +P +W +  V F P RF++  S   ++  +Y PF+ G R C+GQ FA++E K+   +IL ++     P+    P   P    L P+ G  L L+KL
Sbjct:  339 QERCREEVRGILGDGSSITWDQLGEMSYTTMCIKETCRLIPAVPSISRDLSKPLTFPDGCTLPAGITVVLSIWGLHHNPAVWKNPKV-FDPLRFSQENSDQ-RHPYAYLPFSAGSRNCIGQEFAMIELKVTIALILLHFRVTPDPT---RPLTFPNHFILKPKNGMYLHLKKL 506          
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: CP4Z1_HUMAN (Cytochrome P450 4Z1 OS=Homo sapiens GN=CYP4Z1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15
Identity = 51/160 (31.87%), Postives = 88/160 (55.00%), Query Frame = -3
Query:  232 SKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAV 705
            +K+ + Q+R R E+ ++ G+     ++ L+ +    M + E LRLY PV  +SR + K  T     +LPAG+ + + +  +H +P  W D  V F P RF+   S+   +  ++ PF+ G R C+GQ+FA++E K+A  + L    F+L+P +   P  V
Sbjct:  331 AKYPEHQQRCRDEIRELLGDGSSITWEHLSQMPYTTMCIKECLRLYAPVVNISRLLDKPITFPDGRSLPAGITVFINIWALHHNPYFWEDPQV-FNPLRFSRENSEKI-HPYAFIPFSAGLRNCIGQHFAIIECKVAVALTL--LRFKLAPDHSRPPQPV 486          
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: CP391_DROME (Probable cytochrome P450 309a1 OS=Drosophila melanogaster GN=Cyp309a1 PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15
Identity = 48/152 (31.58%), Postives = 74/152 (48.68%), Query Frame = -3
Query:  268 SKHQDWQERARQEVLQVFGNN-KPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLG-----NLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 705
            S+H + QE+ R E+L+   +  +  YD +N+L  +     E LRL  P+    R   K T++       L L  GV + +P    H D +++  +A EF+P+RF  G +     +  + PF  GPRIC+G     +  K A   IL NY  E
Sbjct:  349 SEHHEEQEKLRSEILEALASEGQISYDQINNLPYLDQCFNESLRLTTPIGFFMRICTKPTQINLGDDKTLDLEPGVTVMVPAYQYHHDNDIY-PEASEFRPDRFENGAASVLTKRGCFLPFGDGPRICLGMRVGQLSVKTAIVHILSNYQVE 499          
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: CP133_DROME (Probable cytochrome P450 313a3 OS=Drosophila melanogaster GN=Cyp313a3 PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15
Identity = 44/151 (29.14%), Postives = 80/151 (52.98%), Query Frame = -3
Query:  253 KHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSY 702
            +HQD   +  +E+  V G+ +  YD L  +  ++ ++ E LRL P V    R  +++ +L + + +P GV IG+ +   H++ + WG D   F P+ F    +   ++  +Y PF+ G R C+G  + L+ +K+A + IL+N     S  Y
Sbjct:  318 EHQDTVYQELKELFPVAGDFEVTYDDLQRMVFLERVVNETLRLIPSVPFTPRETIRDFRLSSGVVIPKGVGIGIDIFATHRNRDHWGTDPSSFNPDHFLPD-NVRDRHPYAYIPFSKGRRNCIGWKYGLMSSKLALSKILRNCKVSTSFRY 467          
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: CP4FN_HUMAN (Cytochrome P450 4F22 OS=Homo sapiens GN=CYP4F22 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 45/147 (30.61%), Postives = 83/147 (56.46%), Query Frame = -3
Query:  277 SKHQDWQERARQEVLQVFGNNKPD---YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNY 705
            +K+ ++QE+ R+E+ +V    + +   +D L  L    M + E LR YPPVT++SR   ++ KL +   +P G+   + +   H +P +W D  V + P RF +  +   ++ ++Y PF+ GPR C+GQ+FA+ E ++   + L  +
Sbjct:  352 AKYPEYQEKCREEIQEVMKGRELEELEWDDLTQLPFTTMCIKESLRQYPPVTLVSRQCTEDIKLPDGRIIPKGIICLVSIYGTHHNPTVWPDSKV-YNPYRF-DPDNPQQRSPLAYVPFSAGPRNCIGQSFAMAELRVVVALTLLRF 496          
BLAST of CN188981 vs. ExPASy Swiss-Prot
Match: CP4F3_HUMAN (Leukotriene-B(4) omega-hydroxylase 2 OS=Homo sapiens GN=CYP4F3 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 54/169 (31.95%), Postives = 89/169 (52.66%), Query Frame = -3
Query:  211 SKHQDWQERARQEVLQVFGNNKP---DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHPEL 705
            +KH ++QER RQEV ++  + +P   ++D L  L  + M + E LRL+PPV  +SR   ++  L +   +P G+   + +   H +P +W D  V + P RF     K  ++ +++ PF+ GPR C+GQ FA+ E K+   + L    F + P +       P   PEL
Sbjct:  345 AKHPEYQERCRQEVQELLKDREPKEIEWDDLAQLPFLTMCIKESLRLHPPVPAVSRCCTQDIVLPDGRVIPKGIICLISVFGTHHNPAVWPDPEV-YDPFRFDPKNIKE-RSPLAFIPFSAGPRNCIGQAFAMAEMKVVLGLTL--LRFRVLPDHTE-----PRRKPEL 504          
The following BLAST results are available for this feature:
BLAST of CN188981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
CP4A7_RABIT8.866e-1632.18Cytochrome P450 4A7 OS=Oryctolagus cuniculus GN=CY... [more]
CP4A6_RABIT8.866e-1632.95Cytochrome P450 4A6 OS=Oryctolagus cuniculus GN=CY... [more]
CP4A4_RABIT8.866e-1631.61Cytochrome P450 4A4 OS=Oryctolagus cuniculus GN=CY... [more]
CP46A_MOUSE8.866e-1632.93Cholesterol 24-hydroxylase OS=Mus musculus GN=Cyp4... [more]
CP4X1_HUMAN1.158e-1533.53Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2... [more]
CP4Z1_HUMAN1.512e-1531.88Cytochrome P450 4Z1 OS=Homo sapiens GN=CYP4Z1 PE=2... [more]
CP391_DROME1.512e-1531.58Probable cytochrome P450 309a1 OS=Drosophila melan... [more]
CP133_DROME1.512e-1529.14Probable cytochrome P450 313a3 OS=Drosophila melan... [more]
CP4FN_HUMAN1.975e-1530.61Cytochrome P450 4F22 OS=Homo sapiens GN=CYP4F22 PE... [more]
CP4F3_HUMAN1.975e-1531.95Leukotriene-B(4) omega-hydroxylase 2 OS=Homo sapie... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001C04_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188981 ID=CN188981; Name=CN188981; organism=Citrus sinensis; type=EST; length=707bp
TTTTTTTTTTTTTTTTTGCACCAAATATTGTACAATATTATTATAATACA
GTACTAATGCAATACAGTATAATACAATACAATGTGCCAAACGCACCCTA
AATACATTAAACTTCATTATAAAAAAGTCTACATTGGCATCATGCTCATC
TTATAGTTGCCGGTATTAATTATTTTTGCACCATAGTTTCCGTAGAATCA
ATTGGGTACCCAGTTCCGGATGAAGGGTTGGAACCGCCGTTGGAGCATGG
ACATAGGATGGAGACAACTCGAATGAGTAGTTTTGAAGAATCATTGTCGT
GGCCATTTTTGCTTCTACTAGAGCAAAATTTTGTCCAACACATATCCTAG
GACCCAATGCGAATGGGAAATATGAAACTTGATTTTTCGCCGCCTTTGAA
ATTCCTTCCGCAAACCTTTCCGGCTTAAACTCAACTGCATCGTCACCCCA
AAGTTCAGGATCCTGGTGAACTAGGATCATTGGCAAGCCAATTTGAACCC
CAGCGGGTAATGTCAAGTTTCCGAGTTTCGTTTCCTTAAGAACAGCTCGA
CTAAGCATAGTTACGGGCGGATAAAGCCTGAGTACCTCATAAAGTATCAT
CTGGACAATTTTGAGGTGATTCAATCCATCATAGTCGGGCTTATTATTGC
CAAACACTTGCAAAACCTCTTGCCTTGCACGTTCTTGCCAATCTTGATGC
TTGCTCA
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