CN188967
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188967 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 8.785e-22 Identity = 69/201 (34.33%), Postives = 109/201 (54.23%), Query Frame = 3 Query: 12 MGRGRVELKSLENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSS------MVKTLERYQ----KCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLME-GY 581 MGRG++E+K +EN NRQVTF+KRR G+LKKA E+ VLCDAEV ++IFS+ GKL ++C+ + + + LE+YQ K + ++SA E ++K + +Q R++ GE+L L KEL ++E L+ +R M+D + E++L + +K L R G++ +E GY Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSA----------EIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDK----MMDHWRMHKRNEKMLEDEHKMLAFRVHQQEVELSGGIRELELGY 187
BLAST of CN188967 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.785e-22 Identity = 66/190 (34.74%), Postives = 105/190 (55.26%), Query Frame = 3 Query: 12 MGRGRVELKSLENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTL-ERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEG 578 M RG++++K +EN+ NRQVT++KRRNGL KKA+ELSVLCDA+V++I+ S+ KL+E+ S ++ K L ++YQK V + Q+ KL L+R R +GE L L +++ +L +D SLK IR + + + + + + K + + E ++ L R GL EG Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKA------VGVDLWSSHYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQIVNLIEDMDNSLKLIRERKYKVISNQIDTSKKKVRNVEEIHRNLVLEFDARREDPHFGLVDNEG 184
BLAST of CN188967 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.826e-20 Identity = 72/207 (34.78%), Postives = 111/207 (53.62%), Query Frame = 3 Query: 90 GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS-SMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYL---KLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAA-------------FAGLQLMEGYQV---NTLQLNPSAEDCGYGLKPAQP 650 GLLKKA EL++LCDA++ +IIFS+ GK++EF S SM + ++RYQK +S A +QQ Y ++K + LQ + R+ GE+L L E+ LE+QL++S+ ++RS + Q + L L+ KE +L E N+ L R + HAA G+ + +Q + LQL+P + L+PAQP Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQK---------LSGNCAPVYDNQQVYCEITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQNREL-YRVIQDHHAASMEQKMVDPSMLDHFGVFYQDDHQAARSSMLQLSPQLHP--FRLQPAQP 196
BLAST of CN188967 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.403e-19 Identity = 58/170 (34.12%), Postives = 101/170 (59.41%), Query Frame = 3 Query: 12 MGRGRVELKSLENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTL-ERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL 518 M RG++++K +EN+ NRQVT++KRRNGL KKA+EL+VLCDA V++I+FS+ KL+E+ S ++ K + + YQ + + +V A + + Q+ KL L+ + LGE L L+ +EL LE +++ + K +R + + + + + + K + + K L Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQTIS----DVDVWATQYERM--QETKRKLLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQDIQKNL 164
BLAST of CN188967 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.392e-19 Identity = 58/170 (34.12%), Postives = 98/170 (57.65%), Query Frame = 3 Query: 12 MGRGRVELKSLENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS-SMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL 518 MGRG++E++ +ENK NRQVTF+KRRNG++KKA EL+VLCDA+V+L++ S+ KL+ + S S+ K + YQK V Q+++ K+ L+R +G +L L EL +L+++++ ++ QIR+ + + + + K + L E + L Sbjct: 1 MGRGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSPGVSLKKMYDEYQKIE------GVDLWRKQWERMQEQHRKVLELNSLLRREISRRMGGDLEGLTLVELSALQQEMEEAIIQIRNKKYHTIKNQTGTTRKKIKNLEERHTDL 164
BLAST of CN188967 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.893e-18 Identity = 55/159 (34.59%), Postives = 91/159 (57.23%), Query Frame = 3 Query: 12 MGRGRVELKSLENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS--SMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQH 482 MGRGR E+K +EN RQ TF KRR+GL KKA EL+VLCDA++ L++FS GKLY F S + S+ + +ERY+ + ++ EL K+ + + L++ R + ++ LE+LE L+ +++++RS + + + + LQ+ Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYEATTHTKVWADIRQERRAELE------KVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQN 153
BLAST of CN188967 vs. ExPASy Swiss-Prot
Match: MEF2C_PIG (Myocyte-specific enhancer factor 2C OS=Sus scrofa GN=MEF2C PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.737e-15 Identity = 46/131 (35.11%), Postives = 77/131 (58.78%), Query Frame = 3 Query: 12 MGRGRVELKSLENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERY--------------------QKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQR 344 MGR ++++ + ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L +Y +K N G P+ + AL ++++Y K+ ++ + +S + Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQY-ASTDMDKVLLKYTEYNEPHESRTNSDIVEALNKKENKGCESPDPDSSYALTPRTEEKYKKINEEFDNMIKSHK 130
BLAST of CN188967 vs. ExPASy Swiss-Prot
Match: SRFC_DICDI (Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14 Identity = 37/70 (52.86%), Postives = 53/70 (75.71%), Query Frame = 3 Query: 12 MGRGRVELKSLENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERY 221 MGR ++ ++ + N+ NRQ TF KR+NGL+KKA ELS+LCD E+A+I+FS+ KL+++ SS M K L RY Sbjct: 3 MGRNKITIEKISNERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFSSNNKLFQY-SSRDMDKLLIRY 71
BLAST of CN188967 vs. ExPASy Swiss-Prot
Match: MEF2_DROME (Myocyte-specific enhancer factor 2 OS=Drosophila melanogaster GN=Mef2 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14 Identity = 40/89 (44.94%), Postives = 64/89 (71.91%), Query Frame = 3 Query: 12 MGRGRVELKSLENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALE 278 MGR ++++ + ++ NRQVTF KR+ G++KKAYELSVLCD E+ALIIFS+ KLY++ +S+ M + L +Y + Y P +++ + +E Sbjct: 1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQY-ASTDMDRVLLKYTE--YNEPHESLTNKNIIE 86
BLAST of CN188967 vs. ExPASy Swiss-Prot
Match: MEF2D_XENLA (Myocyte-specific enhancer factor 2D homolog OS=Xenopus laevis GN=mef2d PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14 Identity = 42/87 (48.28%), Postives = 63/87 (72.41%), Query Frame = 3 Query: 12 MGRGRVELKSLENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREA 272 MGR +++++ + ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L +Y + N EP+ S A Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQY-ASTDMDKVLLKYTEYN----EPHESRTNA 82 The following BLAST results are available for this feature:
BLAST of CN188967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188967 ID=CN188967; Name=CN188967; organism=Citrus sinensis; type=EST; length=736bpback to top |