CN182264
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182264 vs. ExPASy Swiss-Prot
Match: RBM3_RAT (Putative RNA-binding protein 3 OS=Rattus norvegicus GN=Rbm3 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 7.552e-13 Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 1 Query: 13 GGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 228 GGL + T + +L + FS++G I E ++ DRET RSRGFGF+TF + + D + MNG++LDGR I V+ A Sbjct: 11 GGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDVMRAMNGESLDGRQIRVDHA 82
BLAST of CN182264 vs. ExPASy Swiss-Prot
Match: ROC1_NICSY (29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.870e-12 Identity = 31/73 (42.47%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 13 GGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 231 G LAW +L FS G ++++K++ DR++GRSRGFGFVT+ + + +AIE ++G +L+GR I V+ A+ Sbjct: 193 GNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAE 265
BLAST of CN182264 vs. ExPASy Swiss-Prot
Match: ROC1_NICPL (30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.870e-12 Identity = 31/73 (42.47%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 13 GGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 231 G LAW +L FS G ++++K++ DR++GRSRGFGFVT+ + + +AIE ++G +L+GR I V+ A+ Sbjct: 199 GNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAE 271
BLAST of CN182264 vs. ExPASy Swiss-Prot
Match: RBM3_HUMAN (Putative RNA-binding protein 3 OS=Homo sapiens GN=RBM3 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.870e-12 Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 1 Query: 13 GGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 228 GGL + T + +L + FS++G I E ++ DRET RSRGFGF+TF + + A+ MNG++LDGR I V+ A Sbjct: 11 GGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHA 82
BLAST of CN182264 vs. ExPASy Swiss-Prot
Match: HNRPG_PANTR (Heterogeneous nuclear ribonucleoprotein G OS=Pan troglodytes GN=RBMX PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.429e-11 Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 13 GGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 228 GGL T + +L F YG I+E ++ DRET +SRGF FVTF +DA MNG++LDG+ I V +A Sbjct: 13 GGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
BLAST of CN182264 vs. ExPASy Swiss-Prot
Match: HNRPG_HUMAN (Heterogeneous nuclear ribonucleoprotein G OS=Homo sapiens GN=RBMX PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 2.429e-11 Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 13 GGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 228 GGL T + +L F YG I+E ++ DRET +SRGF FVTF +DA MNG++LDG+ I V +A Sbjct: 13 GGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
BLAST of CN182264 vs. ExPASy Swiss-Prot
Match: HNRPG_RAT (Heterogeneous nuclear ribonucleoprotein G OS=Rattus norvegicus GN=Rbmx PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.068e-11 Identity = 32/72 (44.44%), Postives = 43/72 (59.72%), Query Frame = 1 Query: 13 GGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 228 GGL T + +L F YG I+E ++ DRET +SRGF FVTF +D MNG++LDG+ I V +A Sbjct: 13 GGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDMNGKSLDGKAIKVEQA 84
BLAST of CN182264 vs. ExPASy Swiss-Prot
Match: RBM38_CHICK (RNA-binding protein 38 OS=Gallus gallus GN=RBM38 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.231e-11 Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 13 GGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 228 GGL + TTDSSL + F +GDI E+ +I DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 16 GGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of CN182264 vs. ExPASy Swiss-Prot
Match: RBM24_XENTR (RNA-binding protein 24 OS=Xenopus tropicalis GN=rbm24 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.231e-11 Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 13 GGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 228 GGL + TTDSSL + F +GDI E+ +I DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 16 GGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of CN182264 vs. ExPASy Swiss-Prot
Match: RBM24_CHICK (RNA-binding protein 24 OS=Gallus gallus GN=RBM24 PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 9.231e-11 Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 13 GGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 228 GGL + TTDSSL + F +GDI E+ +I DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 16 GGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86 The following BLAST results are available for this feature:
BLAST of CN182264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182264 ID=CN182264; Name=CN182264; organism=Citrus sinensis; type=EST; length=637bpback to top |