CN188947
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA1_SCHPO (Importin subunit alpha-1 OS=Schizosaccharomyces pombe GN=cut15 PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 9.371e-56 Identity = 112/212 (52.83%), Postives = 151/212 (71.23%), Query Frame = 3 Query: 6 YPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTH--EQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYW-LDDEDETMPP 632 +PS V PALR+VGNIVTGDD+QTQ +I AL LL+LLS + ++KEACWT+SNITAGN QIQ VIEANII PL+ LL A+F I+KEA WAISNATSGG +QI++LV QG IKPLC+LL C D +I+ V L+G+ENIL+VGE ++ +N++ ++DA G++ I Q N+EIY+K+ ++E ++ +DE E + P Sbjct: 301 HPSAQVQTPALRSVGNIVTGDDVQTQVIINCGALSALLSLLSSP-RDGVRKEACWTISNITAGNSSQIQYVIEANIIPPLIHLLTTADFKIQKEACWAISNATSGGARRPDQIRYLVEQGAIKPLCNLLACQDNKIIQVALDGIENILRVGELDRANNPDKINLYAVYVEDAGGMDLIHECQNSSNSEIYQKAYNIIEKFFGEEDEIEELEP 511
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA2_SCHPO (Importin subunit alpha-2 OS=Schizosaccharomyces pombe GN=imp1 PE=1 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 6.285e-52 Identity = 104/204 (50.98%), Postives = 148/204 (72.55%), Query Frame = 3 Query: 9 PSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSG--GTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDE 614 PS ++ PALR+VGNIVTG D QTQ +I+ AL +LLS + K++I+KEACWT+SNITAGN +QIQA+IE+N+I PLV LL A++ KKEA WAISNATSG G +QI++LV QG IKPLCD+L D +I+ V L+ +ENILKVGE ++ + ++N + +++A G++ I LQ+ N +IY K+ ++E Y+ D++ Sbjct: 302 PSVNIQTPALRSVGNIVTGTDAQTQIIIDCGALNAFPSLLS-HQKENIRKEACWTISNITAGNTQQIQAIIESNLIPPLVHLLSYADYKTKKEACWAISNATSGGLGQPDQIRYLVSQGVIKPLCDMLNGSDNKIIQVALDAIENILKVGEMDRTMDLENINQYAVYVEEAGGMDMIHDLQSSGNNDIYLKAYSIIEKYFSDED 504
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA_DROME (Importin subunit alpha OS=Drosophila melanogaster GN=Pen PE=1 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 9.097e-43 Identity = 97/203 (47.78%), Postives = 134/203 (66.01%), Query Frame = 3 Query: 15 PSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQ-GCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDE 620 PS+++PALR+VGNIVTG D QT VI LP L LL N K +I KEA WTVSNITAGN++QIQAVI+A I L +LE +F +KEAAWA++N T+ GT EQI L+ + +KP DLL DPR + V GL N+ + E LG T+ M+++ GL+K+E+LQ H+N E+Y+K+ +++TY+ + +DE Sbjct: 296 PSIIVPALRSVGNIVTGTDQQTDVVIASGGLPRLGLLLQHN-KSNIVKEAAWTVSNITAGNQKQIQAVIQAGIFQQLRTVLEKGDFKAQKEAAWAVTNTTTSGTPEQIVDLIEKYKILKPFIDLLDTKDPRTIKVVQTGLSNLFALAE---KLGGTE--NLCLMVEEMGGLDKLETLQQHENEEVYKKAYAIIDTYFSNGDDE 492
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA2_HUMAN (Importin subunit alpha-2 OS=Homo sapiens GN=KPNA2 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.647e-42 Identity = 95/211 (45.02%), Postives = 141/211 (66.82%), Query Frame = 3 Query: 21 VLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWL--DDEDETMPPGDASQ 647 ++ PALR +GNIVTG D QTQ VI+ AL +LL+ N K +I+KEA WT+SNITAG ++QIQ V+ ++ LV++L A+F +KEA WA++N TSGGT EQI +LV G I+PL +LL D +I+ V L+ + NI +A + LG T+ + MI++ GL+KIE+LQ H+N +Y+ S+ L+E Y+ ++ED+ + P S+ Sbjct: 309 IVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLT-NPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIF---QAAEKLGETE--KLSIMIEECGGLDKIEALQNHENESVYKASLSLIEKYFSVEEEEDQNVVPETTSE 513
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA2_MOUSE (Importin subunit alpha-2 OS=Mus musculus GN=Kpna2 PE=1 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 3.457e-42 Identity = 97/211 (45.97%), Postives = 141/211 (66.82%), Query Frame = 3 Query: 21 VLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWL--DDEDETMPPGDASQ 647 ++ PALR +GNIVTG D QTQ VI+ AL +LL+ N K +I+KEA WT+SNITAG ++QIQ V+ ++ LV +L A+F +KEAAWAI+N TSGGT EQI +LV G I+PL +LL D +I+ V L+ + NI +A + LG T+ + MI++ GL+KIE+LQ H+N +Y+ S+ L+E Y+ ++ED+ + P S+ Sbjct: 309 IVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLT-NPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIF---QAAEKLGETE--KLSIMIEECGGLDKIEALQRHENESVYKASLNLIEKYFSVEEEEDQNVVPETTSE 513
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA4_HUMAN (Importin subunit alpha-4 OS=Homo sapiens GN=KPNA4 PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.822e-41 Identity = 90/200 (45.00%), Postives = 132/200 (66.00%), Query Frame = 3 Query: 33 ALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAE-KNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDETMP 629 ALR VGNIVTG D QTQ V+ AL LL+ + K+ I KEA W +SNITAGN++Q+QAVI+AN++ ++ LL+ +F +KEAAWAISN T G +Q+ +L+ Q I P C+LL D ++V V L+GL NILK+ E E + +GN +I++ GLEKIE LQ H+N +IY+ + ++++ ++ D+ + P Sbjct: 304 ALRAVGNIVTGTDEQTQVVLNCDALSHFPALLT-HPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEDEAETIGN--------LIEECGGLEKIEQLQNHENEDIYKLAYEIIDQFFSSDDIDEDP 494
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA4_MOUSE (Importin subunit alpha-4 OS=Mus musculus GN=Kpna4 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.452e-40 Identity = 87/199 (43.72%), Postives = 128/199 (64.32%), Query Frame = 3 Query: 33 ALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDETMP 629 ALR VGNIVTG D QTQ V+ AL LL+ + K+ I KEA W +SNITAGN++Q+QAVI+AN++ ++ LL+ +F +KEAAWAISN T G +Q+ +L+ Q I P C+LL D ++V V L+GL NILK+ E + +I++ GLEKIE LQ H+N +IY+ + ++++ ++ D+ + P Sbjct: 304 ALRAVGNIVTGTDEQTQVVLNCDALSHFPALLT-HPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEDQ-------AETIANLIEECGGLEKIEQLQNHENEDIYKLAYEIIDQFFSSDDIDEDP 494
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA2_XENLA (Importin subunit alpha-2 OS=Xenopus laevis GN=kpna2 PE=1 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 7.208e-40 Identity = 93/210 (44.29%), Postives = 128/210 (60.95%), Query Frame = 3 Query: 9 PSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENIL----KVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDETM 626 P S+L P+LRTVGNIVTG D QTQ I+ L L LL + K SI+KEA W +SNI AG QIQ +I ++ PLV LL+ +F +KEA WA++N TSGGT EQ+ LV G ++PL +LL D + + V L+ + NI K+GE EK ++++ GLEKIE+LQTHDN +Y ++ L+E Y+ +E + M Sbjct: 298 PELSILTPSLRTVGNIVTGTDKQTQAAIDAGVLSVLPQLLR-HQKPSIQKEAAWALSNIAAGPAPQIQQMITCGLLSPLVDLLKKGDFKAQKEAVWAVTNYTSGGTVEQVVQLVQCGVLEPLLNLLTIKDSKTILVILDAISNIFLAAEKLGEQEK---------LCLLVEELGGLEKIEALQTHDNRMVYHAALALIEKYFSGEEADEM 497
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA3_CAEEL (Importin subunit alpha-3 OS=Caenorhabditis elegans GN=ima-3 PE=1 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 9.414e-40 Identity = 87/206 (42.23%), Postives = 133/206 (64.56%), Query Frame = 3 Query: 3 GYPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKV-GEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDED 617 G+ V ALR VGNIVTG D QTQ V++ L + LL+ +YK+ I KEA W VSNITAGN++Q+Q V +A I+ ++ LL+ +F +KEAAWAISN T G Q++ +V G ++P C +L C D +I+ V L+G+ NILK+ GEA + + T I++ GL+KIE+LQ H+N +IY+ + ++++ ++ D++ Sbjct: 287 GHVDVKVQTAALRAVGNIVTGTDEQTQLVLDSGVLRFMPGLLA-HYKEKINKEAVWFVSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQKEAAWAISNVTISGRPNQVEQMVKLGVLRPFCAMLSCTDSQIIQVVLDGINNILKMAGEAAEQV--------TSEIEECGGLDKIENLQNHENEDIYKLAFEIIDNFFSSDDE 483
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA1_XENLA (Importin subunit alpha-1 OS=Xenopus laevis GN=kpna1 PE=1 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 4.672e-39 Identity = 91/206 (44.17%), Postives = 125/206 (60.68%), Query Frame = 3 Query: 9 PSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENIL----KVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDE 614 P S++ P+LRTVGNIVTG D QTQ I+ L L LL + K SI+KEA W +SNI AG QIQ +I ++ PLV LL +F +KEA WA++N TSGGT EQ+ LV G ++PL +LL D + + V L+ + NI K+GE EK ++++ GLEKIE+LQTHDN +Y ++ L+E Y+ +E Sbjct: 298 PELSIVTPSLRTVGNIVTGTDKQTQAAIDAGVLSVLPQLLR-HQKPSIQKEAAWAISNIAAGPAPQIQQMITCGLLSPLVDLLNKGDFKAQKEAVWAVTNYTSGGTVEQVVQLVQCGVLEPLLNLLTIKDSKTILVILDAISNIFLAAEKLGEQEK---------LCLLVEELGGLEKIEALQTHDNHMVYHAALALIEKYFSGEE 493 The following BLAST results are available for this feature:
BLAST of CN188947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188947 ID=CN188947; Name=CN188947; organism=Citrus sinensis; type=EST; length=737bpback to top |