CN188947
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA3_MOUSE (Importin subunit alpha-3 OS=Mus musculus GN=Kpna3 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.102e-39 Identity = 87/199 (43.72%), Postives = 127/199 (63.82%), Query Frame = 3 Query: 33 ALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDETMP 629 ALR VGNIVTG D QTQ V+ L NLLS + K+ I KEA W +SNITAGN++Q+QAVI+A +I ++ L +F +KEAAWAISN T G +Q+++LV Q I P C+LL D ++V V L+GL+NIL + + + ++I++ GLEKIE LQ H+N +IY+ + ++++ Y+ D+ + P Sbjct: 304 ALRAVGNIVTGTDEQTQVVLNCDVLSHFPNLLS-HPKEKINKEAVWFLSNITAGNQQQVQAVIDAGLIPMIIHQLAKGDFGTQKEAAWAISNLTISGRKDQVEYLVQQNVIPPFCNLLSVKDSQVVQVVLDGLKNIL-------IMAGDEASTIAEIIEECGGLEKIEVLQQHENEDIYKLAFEIIDQYFSGDDIDEDP 494
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA3_HUMAN (Importin subunit alpha-3 OS=Homo sapiens GN=KPNA3 PE=1 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 6.102e-39 Identity = 87/199 (43.72%), Postives = 127/199 (63.82%), Query Frame = 3 Query: 33 ALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDETMP 629 ALR VGNIVTG D QTQ V+ L NLLS + K+ I KEA W +SNITAGN++Q+QAVI+A +I ++ L +F +KEAAWAISN T G +Q+++LV Q I P C+LL D ++V V L+GL+NIL + + + ++I++ GLEKIE LQ H+N +IY+ + ++++ Y+ D+ + P Sbjct: 304 ALRAVGNIVTGTDEQTQVVLNCDVLSHFPNLLS-HPKEKINKEAVWFLSNITAGNQQQVQAVIDAGLIPMIIHQLAKGDFGTQKEAAWAISNLTISGRKDQVEYLVQQNVIPPFCNLLSVKDSQVVQVVLDGLKNIL-------IMAGDEASTIAEIIEECGGLEKIEVLQQHENEDIYKLAFEIIDQYFSGDDIDEDP 494
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA8_HUMAN (Importin subunit alpha-8 OS=Homo sapiens GN=KPNA7 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.272e-36 Identity = 82/202 (40.59%), Postives = 128/202 (63.37%), Query Frame = 3 Query: 18 SVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDET 623 +VL P+LRTVGNIVTG D QTQ I+ L L LL N K SI+KEA W +SN+ AG IQ ++ +++ PLVALL+N EF ++KEA W ++N +G T +Q+ LV G ++PL +LL PD +IV + L+ + IL+ E N +I++ G+++IE+LQ H+N +I + ++ ++E ++ ++EDE+ Sbjct: 298 NVLTPSLRTVGNIVTGTDEQTQMAIDAGMLNVLPQLLQHN-KPSIQKEAAWALSNVAAGPCHHIQQLLAYDVLPPLVALLKNGEFKVQKEAVWMVANFATGATMDQLIQLVHSGVLEPLVNLLTAPDVKIVLIILDVISCILQAAEKRSEKEN-----LCLLIEELGGIDRIEALQLHENRQIGQSALNIIEKHFGEEEDES 493
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA1A_DICDI (Probable importin subunit alpha-A OS=Dictyostelium discoideum GN=DDB_G0273149 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.702e-36 Identity = 85/207 (41.06%), Postives = 124/207 (59.90%), Query Frame = 3 Query: 6 YPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIE-ANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDET 623 YP V PALR VGNIVTG+ QTQ VI+ + + LL+ KKSI+KE+CW +SNITAG QI V+ + L++LL ++E DIK+EA WA+SN+T+ + + I+ LV +K DLL D I+ + LEGL NI+K GE K T VN + +I + +G I LQ H + ++Y+K+ +L+E + D ++ Sbjct: 321 YPDSIVFTPALRAVGNIVTGESSQTQIVIDNNGVELITRLLAVQ-KKSIRKESCWALSNITAGEPSQIDVVVSNPKTVTTLISLLSHSEHDIKREACWALSNSTNNSSTKSIQTLVRHNILKHFIDLLNSQDLVILKIVLEGLINIIKEGEKTKT--KTGVNPYVNLISEMQGESIIYDLQEHQSKDVYKKAFELIEFFESSDYSDS 524
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA2_CAEEL (Importin subunit alpha-2 OS=Caenorhabditis elegans GN=ima-2 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.175e-28 Identity = 65/199 (32.66%), Postives = 118/199 (59.30%), Query Frame = 3 Query: 18 SVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDE 614 +++ PALRT+GN+ TG+D TQ VI+ +L +L L+ SI KE CW VSNI AG ++QIQAV++AN++ L+ +L++ + + EA+WA+SN GGT+ Q+ ++ + LC L+ + ++ LE L ++ +N V++ +++ GL+ +E LQ + +IY ++ +++ ++ DD+ Sbjct: 317 NLVAPALRTLGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKSGDHKCQFEASWALSNLAQGGTNRQVVAMLEDNVVPALCQALLQTNTDMLNNTLETLYTLML---TVQNGYPHKVDILHDQVEENGGLDSLERLQESQSEQIYTQAYRIITQFFTDDD 512
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA2L_HUMAN (Importin subunit alpha-2-like protein OS=Homo sapiens PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 6.359e-12 Identity = 39/74 (52.70%), Postives = 52/74 (70.27%), Query Frame = 3 Query: 30 PALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVA 251 PALR +GNIVTG D QTQ VI+ AL +LL+ N K +I+KEA WT+SNITA ++QIQ V+ ++ LV+ Sbjct: 73 PALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLT-NPKTNIQKEATWTMSNITASRQDQIQQVVNHGLVPFLVS 145
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA1_CAEEL (Importin subunit alpha-1 OS=Caenorhabditis elegans GN=ima-1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.085e-11 Identity = 40/190 (21.05%), Postives = 97/190 (51.05%), Query Frame = 3 Query: 45 VGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDE 614 + +I+ T+ +I+ L L ++ +Y + +E C+ +SNI + I +I + ++ + ++E +E+ ++EAA+ I + + + ++++V G + DLL C D +V+ L+ + +L+ GE N+ N +++ EK+E L + +I+ ++ +++ +++DD+ Sbjct: 305 INSIIQATGYFTEEMIDAGLLEVLKGFVNVSY---MSQEVCFIISNICVEGEQTIDKLISSGVLREVARVMEASEYRSRREAAFVICHCCASANQKHLEYVVELGMLSAFTDLLTCMDVSLVSYILDAIYLLLQFGEMRLLPDNS--NPVAIKLEEIGCREKLEFLCESQSVDIHARAYTIIDRFYVDDD 489
BLAST of CN188947 vs. ExPASy Swiss-Prot
Match: IMA2_ORYSJ (Importin subunit alpha-2 OS=Oryza sativa subsp. japonica GN=Os01g0158000 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.850e-11 Identity = 53/212 (25.00%), Postives = 101/212 (47.64%), Query Frame = 3 Query: 21 VLIPALRTVGNIVTGDDMQTQCVIEY------QALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTH---------EQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDD 611 +LIP LR +GN++ DD V+ QAL L+ L + + ++KE+ W +SNI AG+ E + + + L+ L+ + +FDI++EAA+ + N T E + +V G + L+ D + L+ LE +++ G K ++++ +G+E +E Q H+N ++ + L++ Y+ +D Sbjct: 322 LLIPVLRGLGNLIAADDYMVDSVLTVGHNIIDQALSGLIKCLKSD-NRVLRKESSWALSNIAAGSFEHKKLIFASEATPVLIRLVTSMQFDIRREAAYTLGNLCVVPTGNCELPKIIVEHLVAIVDGGALPGFIHLVRSADVDTAGLGLQFLELVMR-GYPNKQ--------GPKLVEMEDGIEAMERFQFHENEQMRNMANGLVDEYFGED 523 The following BLAST results are available for this feature:
BLAST of CN188947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188947 ID=CN188947; Name=CN188947; organism=Citrus sinensis; type=EST; length=737bpback to top |