CN188943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.772e-25 Identity = 75/212 (35.38%), Postives = 123/212 (58.02%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTS-SMVKTLERYQKCN----YGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANK----TLGQRTMTLRHAAFAGLQLME-----GYQVNTLQLN 609 MGRG++E+KRIEN NR VTF+KRRNGL+KKA E++VLCDA+VALIIF++ GK+ ++C S + L++YQK + + A N+S E ++K ++LQ R+L GE++ LN K L ++E ++ L ++R + ++ L + E++++E + L Q+ M + A G+ + + GY+V +Q N Sbjct: 1 MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGKKLWDAKHENLS----------NEIDRIKKENDSLQLELRHLKGEDIQSLNLKNLMAVEHAIEHGLDKVR----DHQMEILISKRRNEKMMAEEQRQLTFQLQQQEMAIASNA-RGMMMRDHDGQFGYRVQPIQPN 197
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.772e-25 Identity = 69/173 (39.88%), Postives = 105/173 (60.69%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELTSQ-QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQR 531 MGR +VE+KRIENK +RQVTF+KRRNGL++KA +LS+LC++ +A+++ S GKLY+ + +M K ++RY+ + EAL+L + + YL LK E L+ Q L + + L SLE QL+ +L R+ +T+ M+ + LQ E LL E N+TL + Sbjct: 1 MGRKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKIIDRYE-------IHHADELEALDLAEKTRNYLPLK---ELLEIVQSKLEESNVDNASVDTLISLEEQLETALSVTRARKTELMMGEVKSLQKTENLLREENQTLASQ 163
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.066e-25 Identity = 70/170 (41.18%), Postives = 101/170 (59.41%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELT-SQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL 522 M R R E+KRIE+ RQVTF+KRR GL KKA ELSVLCDA+VALI+FS+ GKL F +SSM + +++Y N + + + +L+L +Y L + R + GEEL L+ EL+ LE+ L+ L ++ T+ Q ++ ++ELQ K L+E N L Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHF-ASSSMNEIIDKY---NTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQL 166
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.376e-24 Identity = 66/170 (38.82%), Postives = 97/170 (57.06%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSS-MVKTLERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL 522 MGRG++E+K+IEN+ RQVTF+KRR GL+KK ELS+LCDA + LI+FS GKL EFC+ + M + ++RY N + +E L E L+ L+ R G +L + EL+ LERQL+ S+ ++R + + M L L K ++L E N + Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRYLHTNGLRLPDHHDDQEQL----HHEMELLRRETCNLELRLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNM 166
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.065e-24 Identity = 67/170 (39.41%), Postives = 102/170 (60.00%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTL-ERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL 522 M RG++++KRIEN+ NRQVT++KRRNGL KKA EL+VLCDA+V++I+ S+ GKL+EF + S K L + YQK V + Q++ KLK L++ R +GE L LN ++LE L +D SLK IR + + + + + + K + + E ++ L Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQK------TVGVDLWNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVIGNQIETFKKKVRNVEEIHRNL 164
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.065e-24 Identity = 62/159 (38.99%), Postives = 98/159 (61.64%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTL-ERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHK 489 MGRGRVELK+IEN NRQVTF+KRR GLLKKA EL++LCDA++ +I+FS GK+YE+ + + + +RY K AP + ++ QE ++K L+ R +G++L L +++ +LE+Q++ SL ++R + Q + L E+ + Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPWRIANIFDRYLK----APSTRFEEMD-VQQRIIQEMTRMKDENNRLRIIMRQYMGDDLASLTLQDVSNLEQQIEFSLYKVRLRKQQLLDQQLLEMHSR 154
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24 Identity = 63/173 (36.42%), Postives = 108/173 (62.43%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTS-SMVKTLERYQKCNYGAPEPNVSAREALELTSQ---QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL 522 MGRG++E+KRIEN NRQVT++KRRNG++KKA E+SVLCDA V++IIF++ GK++EFC+ S ++V L+ Y K +S + + + E ++K +++Q R+L GE++ LN KEL LE L+ +++ + ++ + ++ +++ E N++L Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHK---------LSGKRLWDPKHEHLDNEINRVKKENDSMQIELRHLKGEDITTLNYKELMVLEDALENGTSALKNKQMEF----VRMMRKHNEMVEEENQSL 160
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 8.918e-24 Identity = 66/183 (36.07%), Postives = 101/183 (55.19%), Query Frame = 1 Query: 22 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQRTMTLRHAAFAGLQ 570 R R+ ++RI+N RQVTF+KRR GL KKA ELS+LCDAEV L++FS GKL++F +T SM + ++RY + S + L+ +LK R + GEEL LN ++L+ LE+ L+ L + T+++ +LD + L+ K L E N L ++ R + +Q Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFAST-SMEQIIDRYNSHSKTLQRAEPSQLD-LQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQLQVSRMSRMEEMQ 202
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.987e-23 Identity = 60/170 (35.29%), Postives = 99/170 (58.24%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNS-KELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL 522 MG+G++E+KRIE+ RQVTF+KRR G LKKA EL+VLCDA+V +++FS++GKL++FC S V +E + + + + E +L+ + L+ S R GE+L +++ EL L+ QL+ SL ++ + + + M L +++ Q + E N L Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFC--SPPVILMELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFL 168
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 2.595e-23 Identity = 72/201 (35.82%), Postives = 110/201 (54.73%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSS------MVKTLERYQ----KCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQRTMTLRHAAFAGLQLME-GY 585 MGRG++E+KRIEN NRQVTF+KRR G+LKKA E+ VLCDAEV ++IFS+ GKL ++CT + + + LE+YQ K + ++SA E ++K + +Q R++ GE+L L KEL ++E L+ +R M+D + E++L + +K L R G++ +E GY Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSA----------EIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDK----MMDHWRMHKRNEKMLEDEHKMLAFRVHQQEVELSGGIRELELGY 187 The following BLAST results are available for this feature:
BLAST of CN188943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188943 ID=CN188943; Name=CN188943; organism=Citrus sinensis; type=EST; length=710bpback to top |