CN188943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.747e-22 Identity = 62/170 (36.47%), Postives = 101/170 (59.41%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTL-ERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL 522 M RG++++KRIEN+ NRQVT++KRRNGL KKA+ELSVLCDA+V++I+ S+ KL+E+ + ++ K L ++YQK V + Q+ KL L+R R +GE L L +++ +L +D SLK IR + + + + + + K + + E ++ L Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKA------VGVDLWSSHYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQIVNLIEDMDNSLKLIRERKYKVISNQIDTSKKKVRNVEEIHRNL 164
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22 Identity = 69/190 (36.32%), Postives = 109/190 (57.37%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERY--QKCNYGA--PEPNV--------------SAREALELTSQQEYLKLKARYEALQRSQ---RNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL 522 M R R E++RIE+ RQVTF+KRR GL KKA EL+VLCDA+VAL++FS+ GKL +F +S+M + +++Y N G +P++ ++ + L Q E+ K + E L + R + GEEL L+ +EL+ +E+ L+ L+++ T+ Q + ++ELQ K L+E N L Sbjct: 1 MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQF-ASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRL 189
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20 Identity = 59/170 (34.71%), Postives = 102/170 (60.00%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTL-ERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL 522 M RG++++KRIEN+ NRQVT++KRRNGL KKA+EL+VLCDA V++I+FS+ KL+E+ + ++ K + + YQ + + +V A + + Q+ KL L+ + LGE L L+ +EL LE +++ + K +R + + + + + + K + + K L Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQTIS----DVDVWATQYERM--QETKRKLLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQDIQKNL 164
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.740e-19 Identity = 58/170 (34.12%), Postives = 99/170 (58.24%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTS-SMVKTLERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL 522 MGRG++E+++IENK NRQVTF+KRRNG++KKA EL+VLCDA+V+L++ S+ KL+ + + S+ K + YQK V Q+++ K+ L+R +G +L L EL +L+++++ ++ QIR+ + + + + K + L E + L Sbjct: 1 MGRGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSPGVSLKKMYDEYQKIE------GVDLWRKQWERMQEQHRKVLELNSLLRREISRRMGGDLEGLTLVELSALQQEMEEAIIQIRNKKYHTIKNQTGTTRKKIKNLEERHTDL 164
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19 Identity = 67/204 (32.84%), Postives = 110/204 (53.92%), Query Frame = 1 Query: 94 GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTS-SMVKTLERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLGQRTMTLRHAA-------------FAGLQLMEGYQV---NTLQLNPSAEDCGYGLKPARP 654 GLLKKA EL++LCDA++ +IIFS+ GK++EF + SM + ++RYQK + + + E+T ++K + LQ + R+ GE+L L E+ LE+QL++S+ ++RS + Q + L L+ KE +L E N+ L R + HAA G+ + +Q + LQL+P + L+PA+P Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQKLSGNCAPVYDNQQVYCEIT------RMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQNREL-YRVIQDHHAASMEQKMVDPSMLDHFGVFYQDDHQAARSSMLQLSPQLHP--FRLQPAQP 196
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.638e-19 Identity = 57/159 (35.85%), Postives = 91/159 (57.23%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFC--TTSSMVKTLERYQKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQH 486 MGRGR E+KRIEN RQ TF KRR+GL KKA EL+VLCDA++ L++FS GKLY F T S+ + +ERY+ + ++ EL K+ + + L++ R + ++ LE+LE L+ +++++RS + + + + LQ+ Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYEATTHTKVWADIRQERRAELE------KVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQN 153
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MEF2C_PIG (Myocyte-specific enhancer factor 2C OS=Sus scrofa GN=MEF2C PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.072e-16 Identity = 48/131 (36.64%), Postives = 77/131 (58.78%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERY--------------------QKCNYGAPEPNVSAREALELTSQQEYLKLKARYEALQRSQR 348 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +T M K L +Y +K N G P+ + AL ++++Y K+ ++ + +S + Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST-DMDKVLLKYTEYNEPHESRTNSDIVEALNKKENKGCESPDPDSSYALTPRTEEKYKKINEEFDNMIKSHK 130
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MEF2A_RAT (Myocyte-specific enhancer factor 2A OS=Rattus norvegicus GN=Mef2a PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.938e-16 Identity = 43/96 (44.79%), Postives = 68/96 (70.83%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELTSQQEY 303 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +T M K L +Y + Y P + + + +E +++E+ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST-DMDKVLLKYTE--YNEPHESRTNSDIVEALNKKEH 93
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MEF2A_PIG (Myocyte-specific enhancer factor 2A OS=Sus scrofa GN=MEF2A PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.938e-16 Identity = 43/96 (44.79%), Postives = 68/96 (70.83%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELTSQQEY 303 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +T M K L +Y + Y P + + + +E +++E+ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST-DMDKVLLKYTE--YNEPHESGTNSDIVEALNKKEH 93
BLAST of CN188943 vs. ExPASy Swiss-Prot
Match: MEF2A_HUMAN (Myocyte-specific enhancer factor 2A OS=Homo sapiens GN=MEF2A PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.938e-16 Identity = 43/96 (44.79%), Postives = 68/96 (70.83%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCTTSSMVKTLERYQKCNYGAPEPNVSAREALELTSQQEY 303 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +T M K L +Y + Y P + + + +E +++E+ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST-DMDKVLLKYTE--YNEPHESRTNSDIVEALNKKEH 93 The following BLAST results are available for this feature:
BLAST of CN188943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188943 ID=CN188943; Name=CN188943; organism=Citrus sinensis; type=EST; length=710bpback to top |