CN188929
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_CENSY (Elongation factor 1-alpha OS=Cenarchaeum symbiosum GN=tuf PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.123e-45 Identity = 89/171 (52.05%), Postives = 121/171 (70.76%), Query Frame = 1 Query: 91 EKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKR-SFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKE 600 +K H+N++V GH+D+GKSTT G + LG +D+R I + +E+ + K +FKYAWV+D +K ERERGITID+A KFET +Y+ +IDAPGHRDFIKNMITG S+ADCA+L+ + G + I+ GQ REHA L TLGV Q+I NKMD + KYS+ Y + V++ Sbjct: 7 DKPHLNMIVTGHIDNGKSTTMGHFLMDLGVVDERTIAQHAEESEKTGKGDTFKYAWVMDNIKDERERGITIDLAFQKFETPKYFFTLIDAPGHRDFIKNMITGASEADCAILVLSAKEGETDTAIAAGGQAREHAFLLKTLGVNQLIVAVNKMDDS--KYSEEAYKKTVEK 175
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_ARCFU (Elongation factor 1-alpha OS=Archaeoglobus fulgidus GN=tuf PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.079e-45 Identity = 91/178 (51.12%), Postives = 117/178 (65.73%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 M KEK HIN+ IGHVD GKST G+L+Y+ G I + +I+++ KEA E K +F++AWV+D+LK ERERG+TID+A KF+T +YY ++D PGHRDFIKNMITG SQAD AVL+ D QTREH LA TLG+ Q+I NKMD Y + Y+ + VS L Sbjct: 1 MAKEKEHINVAFIGHVDHGKSTLIGRLLYETGEIPEHIIEKMRKEAQEKGKATFEFAWVMDRLKEERERGVTIDVAHRKFQTDKYYITIVDCPGHRDFIKNMITGASQADAAVLVMDVVE-------KVQPQTREHIFLARTLGINQIIVAINKMDRV--NYDQKEYEAAKEAVSKLL 169
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_METPE (Elongation factor 1-alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=tuf PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 6.958e-45 Identity = 86/178 (48.31%), Postives = 120/178 (67.42%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 M +K H+N+ VIGH+D GKSTT G+L+++ G + +I+ KEA K SF++AWV+D LK ERERGITIDIA +F+T ++Y V+D PGHRDF+KNMITG SQAD A+L+ + G E QT+EH LA TLG+ Q++ NKMDA Y + R++E+ KE++ + Sbjct: 1 MANDKPHMNLAVIGHIDHGKSTTVGRLMFETGAVPAHIIENFRKEAESKGKGSFEFAWVMDNLKEERERGITIDIAHKRFDTAKFYFTVVDCPGHRDFVKNMITGASQADAAILVVAAPDGVME-------QTKEHVFLARTLGITQLVIAINKMDAV--NYDQKRFEEVKKELTQLI 169
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_METB6 (Elongation factor 1-alpha OS=Methanoregula boonei (strain 6A8) GN=tuf PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 6.958e-45 Identity = 87/178 (48.88%), Postives = 121/178 (67.98%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 M +K H+N+ VIGH+D GKSTT G+++++ G + +I+ KEA K +F++AWV+D LK ERERGITIDIA +F+T +YY V+D PGHRDF+KNMITG SQAD A+L+ + G E QT+EH LA TLG+ Q+I NKMDA K+ + R++E+ KE+S + Sbjct: 1 MAADKPHMNLAVIGHIDHGKSTTVGRMMFETGAVPAHIIEAYRKEAESKGKATFEFAWVMDNLKEERERGITIDIAHKRFDTPKYYFTVVDCPGHRDFVKNMITGASQADAAILVVAAPDGVME-------QTKEHVFLARTLGITQIIIAINKMDAV--KFDEKRFNEVKKELSDLI 169
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_PYRFU (Elongation factor 1-alpha OS=Pyrococcus furiosus GN=tuf PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 9.088e-45 Identity = 96/178 (53.93%), Postives = 122/178 (68.54%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 M K+K H+NIV IGHVD GKSTT G+L+Y G I +++I++ E E E K SFK+AWV+D+LK ERERGITID+A KFET Y +IDAPGHRDF+KNMITG SQAD AVL+ +T G QT+EHA LA TLG+K +I NKMD Y++ R++E+ +V L Sbjct: 1 MPKDKPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPEQIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVAINKMDMV--NYNQKRFEEVKAQVEKLL 167
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: HBS1L_PONAB (HBS1-like protein OS=Pongo abelii GN=HBS1L PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.187e-44 Identity = 88/174 (50.57%), Postives = 119/174 (68.39%), Query Frame = 1 Query: 94 KTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 K +N+VVIGHVD+GKST G ++Y LG I+KR + + E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT ++DAPGH+DFI NMITG +QAD AVL+ D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +L Sbjct: 258 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFL 429
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: HBS1L_HUMAN (HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.187e-44 Identity = 88/174 (50.57%), Postives = 119/174 (68.39%), Query Frame = 1 Query: 94 KTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 K +N+VVIGHVD+GKST G ++Y LG I+KR + + E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT ++DAPGH+DFI NMITG +QAD AVL+ D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +L Sbjct: 258 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFL 429
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_UNCMA (Elongation factor 1-alpha OS=Uncultured methanogenic archaeon RC-I GN=tuf PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.187e-44 Identity = 88/178 (49.44%), Postives = 120/178 (67.42%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 M K HIN+ VIGH+D GKST G+L+++ G + +I++ +KEA K +F++AWV+D LK ERERGITIDIA +F+T +YY V+D PGHRDF+KNMITG SQAD A+L+ + G + QT+EH L+ TLG+ Q+I NKMDA Y + RY+E+ +EVS L Sbjct: 1 MAATKPHINLAVIGHIDHGKSTLVGRLLFETGAVPAHIIEQYKKEAESKGKGTFEFAWVMDSLKEERERGITIDIAHRRFDTEKYYFTVVDCPGHRDFVKNMITGASQADAAILVCAAPDGVMQ-------QTKEHIFLSKTLGINQLIIAVNKMDAI--NYDQKRYNEVKEEVSKIL 169
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: HBS1L_RAT (HBS1-like protein OS=Rattus norvegicus GN=Hbs1l PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.550e-44 Identity = 87/174 (50.00%), Postives = 119/174 (68.39%), Query Frame = 1 Query: 94 KTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 K +N+VVIGHVD+GKST G ++Y LG ++KR + + E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT ++DAPGH+DFI NMITG +QAD AVL+ D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +L Sbjct: 253 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVVTLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFL 424
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: HBS1L_MOUSE (HBS1-like protein OS=Mus musculus GN=Hbs1l PE=1 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 1.550e-44 Identity = 87/174 (50.00%), Postives = 119/174 (68.39%), Query Frame = 1 Query: 94 KTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 K +N+VVIGHVD+GKST G ++Y LG ++KR + + E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT ++DAPGH+DFI NMITG +QAD AVL+ D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +L Sbjct: 256 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFL 427 The following BLAST results are available for this feature:
BLAST of CN188929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188929 ID=CN188929; Name=CN188929; organism=Citrus sinensis; type=EST; length=615bpback to top |