CN188929
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_THESM (Elongation factor 1-alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tuf PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.025e-44 Identity = 97/178 (54.49%), Postives = 121/178 (67.98%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 M KEK H+NIV IGHVD GKSTT G+L++ I +++I++ E E E K SFK+AWV+D+LK ERERGITID+A KFET Y +IDAPGHRDF+KNMITG SQAD AVLI +T G QT+EHA LA TLG+ +I NKMDA KY + R+ E+ +V+ L Sbjct: 1 MAKEKPHVNIVFIGHVDHGKSTTIGRLLFDTANIPEQIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLIVAATDGVMP-------QTKEHAFLARTLGINHIIVGVNKMDAV--KYDEKRFKEVATQVTKLL 167
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_PYRWO (Elongation factor 1-alpha OS=Pyrococcus woesei GN=tuf PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.025e-44 Identity = 95/178 (53.37%), Postives = 122/178 (68.54%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 M K+K H+NIV IGHVD GKSTT G+L+Y G I +++I++ E E E K SFK+AWV+D+L+ ERERGITID+A KFET Y +IDAPGHRDF+KNMITG SQAD AVL+ +T G QT+EHA LA TLG+K +I NKMD Y++ R++E+ +V L Sbjct: 3 MPKDKPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPEQIIKKFE-EMGEKGK-SFKFAWVMDRLREERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVAINKMDMV--NYNQKRFEEVKAQVEKLL 169
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_PYRCJ (Elongation factor 1-alpha OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=tuf PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.644e-44 Identity = 82/175 (46.86%), Postives = 116/175 (66.29%), Query Frame = 1 Query: 91 EKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 +K HIN+ V+GHVD+GKST G+L+Y+ G +D++ + +E+ A +M K F +AW+LD+ K ERERG+TI+ FET + + +ID PGHRDF+KNMI G SQAD A+ + + G FE I GQ REH L TLG++Q++ NKMDA Y + RY+++ EVS L Sbjct: 14 QKPHINLAVVGHVDNGKSTLVGRLLYETGYVDEKAFKEIEEMAKKMGKEDFAFAWILDRFKEERERGVTIEATHVGFETQKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGIQQLVVAVNKMDAV--NYDQKRYEQVKAEVSKLL 186
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAE (Elongation factor 1-alpha OS=Pyrobaculum aerophilum GN=tuf PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 3.453e-44 Identity = 82/175 (46.86%), Postives = 117/175 (66.86%), Query Frame = 1 Query: 91 EKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 +K HIN+ V+GHVD+GKST G+L+Y+ G +D++ ++ +E+ A ++ K F +AW+LD+ K ERERG+TI+ FET + + +ID PGHRDF+KNMI G SQAD A+ + + G FEA I GQ REH L TLGV+Q++ NKMD Y + RY+++ EVS L Sbjct: 14 QKPHINLAVVGHVDNGKSTLVGRLLYETGYVDEKALKEIEEMAKKIGKEDFAFAWILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFEAAIGPQGQGREHLFLIRTLGVQQIVVAVNKMDVV--NYDQKRYEQVKAEVSKLL 186
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_METJA (Elongation factor 1-alpha OS=Methanocaldococcus jannaschii GN=tuf PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 4.510e-44 Identity = 90/178 (50.56%), Postives = 122/178 (68.54%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 M K+K +N+ IGHVD+GKSTT G+L+Y G ID ++++++++EA E K F++A+V+D LK ERERG+TID+A KFET +Y ++D PGHRDFIKNMITG SQAD AVL+ D +A QTREH LA TLG+KQ+ NKMD T YS+ Y+++ K +S L Sbjct: 1 MAKQKPVLNVAFIGHVDAGKSTTVGRLLYDSGAIDPQLLEKLKREAQERGKAGFEFAYVMDNLKEERERGVTIDVAHKKFETQKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVDVN----DAKTGIQPQTREHMFLARTLGIKQIAVAINKMD--TVNYSQEEYEKMKKMLSEQL 172
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: HBS1L_BOVIN (HBS1-like protein OS=Bos taurus GN=HBS1L PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 5.890e-44 Identity = 87/174 (50.00%), Postives = 118/174 (67.82%), Query Frame = 1 Query: 94 KTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 K +N+VVIGHVD+GKST G L+Y LG ++KR + + E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFET ++DAPGH+DFI NMITG +QAD AVL+ D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +L Sbjct: 260 KQLLNLVVIGHVDAGKSTLMGHLLYLLGDVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFL 431
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_PYRIL (Elongation factor 1-alpha OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=tuf PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 5.890e-44 Identity = 84/175 (48.00%), Postives = 115/175 (65.71%), Query Frame = 1 Query: 91 EKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 +K H+N+ VIGHVD+GKST G+L+Y+ G +D++ + +E+ A +M K F +AW+LD+ K ERERG+TI+ FET + + +ID PGHRDFIKNMI G SQAD A+ + + G FE I GQ REH L TLGV+Q++ NKMD Y + RY++I EVS L Sbjct: 14 QKPHLNLAVIGHVDNGKSTLVGRLLYETGYVDEKAFKEIEEMAKKMGKEDFAFAWILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFIKNMIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGVQQIVVAVNKMDIV--NYDQKRYEQIKAEVSKLL 186
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAR (Elongation factor 1-alpha OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=tuf PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.005e-43 Identity = 81/175 (46.29%), Postives = 115/175 (65.71%), Query Frame = 1 Query: 91 EKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 +K HIN+ V+GHVD+GKST G+L+Y+ G +D++ + +E+ A +M K F +AW+LD+ K ERERG+TI+ FET + + +ID PGHRDF+KNMI G SQAD A+ + + G FE I GQ REH L TLG++Q++ NKMD Y + RY+++ EVS L Sbjct: 14 QKPHINLAVVGHVDNGKSTLVGRLLYETGYVDEKGFKEIEEMAKKMGKEDFAFAWILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGIQQLVVAVNKMDVV--NYDQKRYEQVKSEVSKLL 186
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_PYRHO (Elongation factor 1-alpha OS=Pyrococcus horikoshii GN=tuf PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.923e-43 Identity = 95/178 (53.37%), Postives = 119/178 (66.85%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 M KEK H+NIV IGHVD GKSTT G+L+Y G I + +I++ E E E K SFK+AWV+D+LK ERERGITID+A KFET Y +IDAPGHRDF+KNMITG SQAD AVL+ +T G QT+EHA LA TLG+K +I NKMD Y + ++++ +V L Sbjct: 1 MPKEKPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPETIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVTINKMDMV--NYDQKVFEKVKAQVEKLL 167
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAB (Elongation factor 1-alpha OS=Pyrococcus abyssi GN=tuf PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.923e-43 Identity = 95/178 (53.37%), Postives = 119/178 (66.85%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 M KEK H+NIV IGHVD GKSTT G+L+Y G I + +I++ E E E K SFK+AWV+D+LK ERERGITID+A KFET Y +IDAPGHRDF+KNMITG SQAD AVL+ +T G QT+EHA LA TLG+K +I NKMD Y + ++++ +V L Sbjct: 1 MPKEKPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPETIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVTINKMDMV--NYDQKVFEKVKAQVEKLL 167 The following BLAST results are available for this feature:
BLAST of CN188929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188929 ID=CN188929; Name=CN188929; organism=Citrus sinensis; type=EST; length=615bpback to top |