CN188929
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: ERF3_YEAST (Eukaryotic peptide chain release factor GTP-binding subunit OS=Saccharomyces cerevisiae GN=SUP35 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.358e-40 Identity = 78/174 (44.83%), Postives = 113/174 (64.94%), Query Frame = 1 Query: 94 KTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 K H++++ +GHVD+GKST G L+Y G +DKR I++ E+EA + ++ + +WV+D K ER G TI++ FET + ++DAPGH+ ++ MI G SQAD VL+ + G +E G + GQTREHALLA T GV +M+ NKMD T +SK RYD+ V VS++L Sbjct: 258 KDHVSLIFMGHVDAGKSTMGGNLLYLTGSVDKRTIEKYEREAKDAGRQGWYLSWVMDTNKEERNDGKTIEVGKAYFETEKRRYTILDAPGHKMYVSEMIGGASQADVGVLVISARKGEYETGFERGGQTREHALLAKTQGVNKMVVVVNKMDDPTVNWSKERYDQCVSNVSNFL 431
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_NATPD (Elongation factor 1-alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=tuf PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 6.740e-40 Identity = 83/178 (46.63%), Postives = 115/178 (64.61%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 M ++K H N+ VIGHVD GKST G+L+++ G + + VI++ +EA E K F++A+V+D L ERERG+TIDIA +F+T YY ++D PGHRDF+KNMITG SQAD AVL+ + G QT+EH LA TLG+ ++I NKMD Y + +Y +V EV+ L Sbjct: 1 MSEDKPHQNLAVIGHVDHGKSTMVGRLLFETGSVPEHVIEQYREEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFDTDEYYFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VQPQTQEHVFLARTLGIDELIIAVNKMDLV--DYDENKYKAVVDEVNQLL 169
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: ERF3_KLULA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Kluyveromyces lactis GN=SUP35 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.501e-39 Identity = 77/174 (44.25%), Postives = 111/174 (63.79%), Query Frame = 1 Query: 94 KTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 K H++I+ +GHVD+GKST G L+Y G +DKR +++ E+EA E ++ + +WV+D K ER G TI++ FET + ++DAPGH+ ++ MI G SQAD +L+ + G +E G K GQTREHALLA T GV +MI NKMD T + K RYD V ++++L Sbjct: 272 KDHVSIIFMGHVDAGKSTMGGNLLYLTGSVDKRTVEKYEREAKEAGRQGWYLSWVMDTNKEERNDGKTIEVGRAYFETEKRRYTILDAPGHKMYVSEMIGGASQADIGILVISARKGEYETGFEKGGQTREHALLAKTQGVNKMIVVINKMDDPTVGWDKERYDHCVGNLTNFL 445
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_NANEQ (Elongation factor 1-alpha OS=Nanoarchaeum equitans GN=tuf PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.561e-39 Identity = 84/178 (47.19%), Postives = 116/178 (65.17%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 M +EK HIN+V IGHVD GKSTT G+L Y LG I + ++++ +EA + K F +A+++D+ K ER RG+TIDIA + ET Y ++DAPGH+DF+KNMITG SQAD AVL+ + G E QT+EHA+LA T G+ Q+I NKMD Y + R++E+ +V L Sbjct: 1 MPREKPHINVVFIGHVDHGKSTTVGRLKYDLGLIPESELEKIREEAKKYGKEEFVFAYLMDRQKEERARGVTIDIAHTELETPHNYITIVDAPGHKDFVKNMITGASQADAAVLVVAADDGVQE-------QTQEHAVLARTFGINQIIVYINKMDKV--NYDQKRFEEVKNQVLKLL 169
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: HBS1_SCHPO (Elongation factor 1 alpha-like protein OS=Schizosaccharomyces pombe GN=hbs1 PE=2 SV=4) HSP 1 Score: 160.999 bits (406), Expect = 4.368e-39 Identity = 81/174 (46.55%), Postives = 115/174 (66.09%), Query Frame = 1 Query: 94 KTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 K +++VV GHVDSGKST G+++++LG I+ R +Q++ EAA K SF YAW+LD + ER RG+T+D+A FE+ + + DAPGHRDFI MI G S AD AVL+ DS+ FE G ++GQTREHA L LG+ +++ NK+D + +S+ R+ EI VS +L Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQEIKNIVSDFL 346
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: ERF3_CANAL (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida albicans GN=SUP35 PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 9.732e-39 Identity = 74/174 (42.53%), Postives = 112/174 (64.37%), Query Frame = 1 Query: 94 KTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 K H++I+ +GHVD+GKST G ++Y G +DKR +++ E+EA + ++ + +WV+D K ER G TI++ FET + ++DAPGH+ ++ MI G SQAD +L+ + G +E G K GQTREHALLA T GV ++I NKMD +T +SK RY E ++ ++L Sbjct: 290 KDHVSIIFMGHVDAGKSTMGGNILYLTGSVDKRTVEKYEREAKDAGRQGWYLSWVMDTNKEERNDGKTIEVGKAYFETDKRRYTILDAPGHKMYVSEMIGGASQADVGILVISARKGEYETGFEKGGQTREHALLAKTQGVNKIIVVVNKMDDSTVGWSKERYQECTTKLGAFL 463
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_HALWD (Elongation factor 1-alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=tuf PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 9.732e-39 Identity = 82/175 (46.86%), Postives = 113/175 (64.57%), Query Frame = 1 Query: 91 EKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 +K H N+ +IGHVD GKST G+L+++ G + + VI++ +EA E K F++A+V+D L ERERG+TIDIA +F+T YY ++D PGHRDF+KNMITG SQAD AVL+ + G QTREH LA TLG+ ++I NKMD YS+ Y+++ EV L Sbjct: 3 DKPHQNLAIIGHVDHGKSTLVGRLLFETGSVPEHVIEQHREEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFDTEDYYFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VAPQTREHVFLARTLGINELIIGVNKMDIV--DYSEETYEDVKTEVDKLL 168
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: ERF3_PICPI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Pichia pinus GN=SUP2 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.271e-38 Identity = 74/174 (42.53%), Postives = 113/174 (64.94%), Query Frame = 1 Query: 94 KTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 K H++I+ +GHVD+GKST G L++ G +DKR +++ E+EA + ++ + +W++D K ER G TI++ FET + ++DAPGH+ +I MI G SQAD VL+ S G +EAG + GQ+REHA+LA T GV +++ NKMD T +SK RY+E +++ YL Sbjct: 316 KDHMSIIFMGHVDAGKSTMGGNLLFLTGAVDKRTVEKYEREAKDAGRQGWYLSWIMDTNKEERNDGKTIEVGKSYFETDKRRYTILDAPGHKLYISEMIGGASQADVGVLVISSRKGEYEAGFERGGQSREHAILAKTQGVNKLVVVINKMDDPTVNWSKERYEECTTKLAMYL 489
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: ERF3_CANMA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida maltosa GN=SUP35 PE=3 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 2.168e-38 Identity = 74/174 (42.53%), Postives = 110/174 (63.22%), Query Frame = 1 Query: 94 KTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 K H++I+ +GHVD+GKST G ++Y G +DKR +++ E+EA + ++ + +WV+D K ER G TI++ FET + ++DAPGH+ ++ MI G SQAD +L+ + G +E G K GQTREHALLA T GV ++I NKMD T +SK RY E ++ +L Sbjct: 287 KDHVSIIFMGHVDAGKSTMGGNILYLTGSVDKRTVEKYEREAKDAGRQGWYLSWVMDTNKEERNDGKTIEVGKAYFETDKRRYTILDAPGHKMYVSEMIGGASQADVGILVISARKGEYETGFEKGGQTREHALLAKTQGVNKIIVVVNKMDDPTVNWSKERYQECTTKLGVFL 460
BLAST of CN188929 vs. ExPASy Swiss-Prot
Match: EF1A_HALMA (Elongation factor 1-alpha OS=Haloarcula marismortui GN=tuf PE=1 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 6.308e-38 Identity = 80/175 (45.71%), Postives = 113/175 (64.57%), Query Frame = 1 Query: 91 EKTHINIVVIGHVDSGKSTTAGQLIYKLGGIDKRVIQRVEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCAVIDAPGHRDFIKNMITGTSQADCAVLISDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAATPKYSKARYDEIVKEVSSYL 615 ++ H N+ +IGHVD GKST G+L+Y+ G + + VI++ ++EA E K F++A+V+D L ERERG+TIDIA +F T Y ++D PGHRDF+KNMITG SQAD AVL+ + G QT+EH LA TLG+ ++I NKMD Y ++ Y ++V+EV L Sbjct: 3 DEQHQNLAIIGHVDHGKSTLVGRLLYETGSVPEHVIEQHKEEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFSTDTYDFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VQPQTQEHVFLARTLGIGELIVAVNKMDLV--DYGESEYKQVVEEVKDLL 168 The following BLAST results are available for this feature:
BLAST of CN188929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188929 ID=CN188929; Name=CN188929; organism=Citrus sinensis; type=EST; length=615bpback to top |