CN188928
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188928 vs. ExPASy Swiss-Prot
Match: ERF3_YEAST (Eukaryotic peptide chain release factor GTP-binding subunit OS=Saccharomyces cerevisiae GN=SUP35 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.983e-18 Identity = 51/175 (29.14%), Postives = 92/175 (52.57%), Query Frame = -1 Query: 219 ETGVLKPGMVVTFGPSGLTTEVKSVEMHHE-ALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 740 E+G +K G P+ E++++ E + A+ G+ V +K V +D+ GFV ++ K+ P + F +Q+ I+ I G++ V+ HT+ V +L+ K+++ + ++ +K P F K G + + P+ VET+ DYP LGRF +RD T+A+G I + Sbjct: 510 ESGHIKKGQSTLLMPNKTAVEIQNIYNETENEVDMAMCGEQVKLRIKGVEEEDISPGFVLTSPKN-PIKSVTKFVAQIAIVELKSIIAAGFSCVMHVHTAIEEVHIVKLLHKLEKGTNRKSKKPPAFAKKGMKVIAVLETEAPVCVETYQDYPQLGRFTLRDQGTTIAIGKIVKI 683
BLAST of CN188928 vs. ExPASy Swiss-Prot
Match: ERF3_PICPI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Pichia pinus GN=SUP2 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.021e-17 Identity = 50/172 (29.07%), Postives = 91/172 (52.91%), Query Frame = -1 Query: 228 ETGVLKPGMVVTFGPSGLTTEVKSVEMHHEA-LQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVI 740 E+G +K G + P+ EV ++ EA A G+ V ++ + +DL G+V S S + P + F +Q+ I+ + G++ V+ HT+ V F++L+ + + + + +K P F K G + + T+P+ +E++ DYP LGRF +RD QT+A+G + Sbjct: 567 ESGHVKKGQNLLVMPNKTQVEVTTIYNETEAEADSAFCGEQVRLRLRGIEEEDLSAGYVLS-SINHPVKTVTRFEAQIAIVELKSILSTGFSCVMHVHTAIEEVTFTQLLHNLQKGTNRRSKKAPAFAKQGMKIIAVLETTEPVCIESYDDYPQLGRFTLRDQGQTIAIGKV 737
BLAST of CN188928 vs. ExPASy Swiss-Prot
Match: ERF3A_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus GN=Gspt1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.333e-17 Identity = 49/179 (27.37%), Postives = 93/179 (51.96%), Query Frame = -1 Query: 207 ETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKNVEKKD 740 E+G + G + P+ EV + PG+N+ +K + +++ GF+ + ++ F +Q++I+ H I GY VL HT V+ + L+ +D++SG++ + P+F+K + ++ + +ETF D+P +GRF +RD +T+A+G V+K V +KD Sbjct: 322 ESGSICKGQQLVMMPNKHNVEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDL-NNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 499
BLAST of CN188928 vs. ExPASy Swiss-Prot
Match: ERF3A_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Homo sapiens GN=GSPT1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.333e-17 Identity = 49/179 (27.37%), Postives = 93/179 (51.96%), Query Frame = -1 Query: 207 ETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKNVEKKD 740 E+G + G + P+ EV + PG+N+ +K + +++ GF+ + ++ F +Q++I+ H I GY VL HT V+ + L+ +D++SG++ + P+F+K + ++ + +ETF D+P +GRF +RD +T+A+G V+K V +KD Sbjct: 322 ESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDP-NNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 499
BLAST of CN188928 vs. ExPASy Swiss-Prot
Match: ERF3B_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Mus musculus GN=Gspt2 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.274e-17 Identity = 49/179 (27.37%), Postives = 92/179 (51.40%), Query Frame = -1 Query: 207 ETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKNVEKKD 740 E+G + G + P+ + EV + PG+N+ +K + +++ GF+ + F Q++I+ H I GY VL HT V+ + L++ +D++SG++ + P+F+K + ++ + +ETF D+P +GRF +RD +T+A+G V+K V +KD Sbjct: 455 ESGSIFKGQQLVMMPNKHSVEVLGIVSDDAETDFVAPGENLKIRLKGIEEEEILPGFILCEPSN-LCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 632
BLAST of CN188928 vs. ExPASy Swiss-Prot
Match: ERF3_KLULA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Kluyveromyces lactis GN=SUP35 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.969e-17 Identity = 49/175 (28.00%), Postives = 94/175 (53.71%), Query Frame = -1 Query: 219 ETGVLKPGMVVTFGPSGLTTEVKSVEMHHEA-LQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 740 E+G ++ G P+ + E+ ++ E+ + A+ G+ V +K V +++ GFV ++ K+ P + F +Q+ I+ + G++ V+ HT+ V + L+ K+++ S ++ +K P F K G + + +P+ VET+ DYP LGRF +RD T+A+G I + Sbjct: 524 ESGHIRKGNQTLLMPNRTSVEILTIYNETESEVDMAVCGEQVRLRIKGVEEEEISAGFVLTSPKN-PVKNVTRFVAQIAIVELKSIMSAGFSCVMHIHTAIEEVTVTRLLHKLEKGSNRKSKKPPAFAKKGMKIIAVIETNEPVCVETYDDYPQLGRFTLRDQGTTIAIGKIVKI 697
BLAST of CN188928 vs. ExPASy Swiss-Prot
Match: ERF3_CANAL (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida albicans GN=SUP35 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.969e-17 Identity = 54/174 (31.03%), Postives = 94/174 (54.02%), Query Frame = -1 Query: 228 ETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQE---ALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVI 740 E+G +K G + P+ EV ++ +E QE A G+ V +K + +DL+ G+V ++ K+ P + F +Q+ I+ + NG++ V+ HT+ VKF EL K+++ + ++ +K P F K G + + + + ET+ DYP LGRF +RD T+A+G I Sbjct: 541 ESGHVKKGTNLIMMPNKTPIEVLTI--FNETEQECDTAFSGEQVRLKIKGIEEEDLQPGYVLTSPKN-PVKTVTRFEAQIAIVELKSILSNGFSCVMHLHTAIEEVKFIELKHKLEKGTNRKSKKPPAFAKKGMKIIAILEVGELVCAETYKDYPQLGRFTLRDQGTTIAIGKI 711
BLAST of CN188928 vs. ExPASy Swiss-Prot
Match: ERF3B_PONAB (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Pongo abelii GN=GSPT2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.969e-17 Identity = 49/179 (27.37%), Postives = 92/179 (51.40%), Query Frame = -1 Query: 207 ETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKNVEKKD 740 E+G + G + P+ EV + PG+N+ +K + +++ GF+ + + F Q++I+ H I GY VL HT V+ + L++ +D++SG++ + P+F+K + ++ + +ETF D+P +GRF +RD +T+A+G V+K V +KD Sbjct: 451 ESGSIFKGQQLVMMPNKHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSN-LCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 628
BLAST of CN188928 vs. ExPASy Swiss-Prot
Match: ERF3B_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Homo sapiens GN=GSPT2 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.969e-17 Identity = 49/179 (27.37%), Postives = 92/179 (51.40%), Query Frame = -1 Query: 207 ETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKNVEKKD 740 E+G + G + P+ EV + PG+N+ +K + +++ GF+ + + F Q++I+ H I GY VL HT V+ + L++ +D++SG++ + P+F+K + ++ + +ETF D+P +GRF +RD +T+A+G V+K V +KD Sbjct: 451 ESGSIFKGQQLVMMPNKHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSN-LCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 628
BLAST of CN188928 vs. ExPASy Swiss-Prot
Match: ERF3_DEBHA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Debaryomyces hansenii GN=SUP35 PE=3 SV=4) HSP 1 Score: 86.6557 bits (213), Expect = 1.474e-16 Identity = 56/177 (31.64%), Postives = 93/177 (52.54%), Query Frame = -1 Query: 219 ETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQE---ALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 740 E+G +K G + P+ + EV V + +E QE A G+ V +K V +DL G+V + S P + F +Q+ I+ + NG++ V+ HT+ V F EL K+++ + ++ +K P F K G + + + + ET++DYP LGRF +RD T+A+G I V Sbjct: 527 ESGHIKKGGNLLLMPNKASIEV--VAIFNETEQECDAAFCGEQVRLKIKGVEEEDLAPGYVLT-SPLKPIKTITRFEAQIAIVELKSILSNGFSCVMHLHTAIEEVTFIELKHKLEKGTNRKSKKPPAFAKKGMKVIAILETNESVCAETYADYPQLGRFTLRDQGTTIAIGKITKV 700 The following BLAST results are available for this feature:
BLAST of CN188928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 178
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188928 ID=CN188928; Name=CN188928; organism=Citrus sinensis; type=EST; length=740bpback to top |