CN188918

Overview
NameCN188918
Unique NameCN188918
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_SHEDO (Sulfite reductase [NADPH] hemoprotein beta-component OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=cysI PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.504e-36
Identity = 81/204 (39.71%), Postives = 121/204 (59.31%), Query Frame = 1
Query:   55 DSPEPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAGKMKKT----LREIIEKYNLNVRITPNQNIILCDI 654
            ++ EP+YG  +LPRKFK+AV+VP DN VD+ TND+G + ++ E+G+  GFNL  GGGMG TH    TFPRL +  G++   D++   +A++  QR+ G R  RK +R+KY I   G + F++ VE   G KF P R +   +     GW E  D      L +++GRI     +T    LREI + +  + R+T NQN+I+  +
Sbjct:  192 ETVEPVYGNTYLPRKFKMAVSVPPDNDVDVYTNDLGFIAIA-EDGQLVGFNLVAGGGMGSTHGEVETFPRLADDFGFIKTADVIKFAEAVMTVQRDWGNRVVRKRARLKYTIVDHGFDAFKAEVENRAGVKFAPKRDVVIGDRGDRYGWVEGIDSKWHLTLFIESGRIKDLPGQTLQTGLREIAKIHKGDFRMTSNQNMIIAGV 394          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_BORPD (Sulfite reductase [NADPH] hemoprotein beta-component OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=cysI PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.977e-36
Identity = 76/208 (36.54%), Postives = 117/208 (56.25%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAG----KMKKTLREIIEKYNLNVRITPNQNIILCDIRKAWKRP 675
            EP YG  +LPRKFK+   +P  N +D+   D+G + ++ ++G  QGFN+ +GGGMGRT +   T+PRL + +G+VP E ++    A++  QR+ G R DR  +R KY I   G++  ++ +E+  G   +P R          LGW    DG     L + NGR+       + + LREI   +  + RITPNQN+++ DI  A +RP
Sbjct:  206 EPFYGQTYLPRKFKIGFVIPPVNDIDVYAQDLGFIAIAGDDGALQGFNVAIGGGMGRTDQAPATYPRLADVIGFVPPEAVIATCDAVMGVQRDYGNRKDRARARFKYTIDEHGLDAVKAEIERRLGFALQPARPFRFDSNGDALGWQTGEDGRHHVTLFIQNGRLVNLPGLPLLEGLREIARVHTGSFRITPNQNVVIADIGDA-ERP 412          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_ACTPL (Sulfite reductase [NADPH] hemoprotein beta-component OS=Actinobacillus pleuropneumoniae GN=cysI PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.332e-35
Identity = 79/201 (39.30%), Postives = 116/201 (57.71%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAGKMKKTLR----EIIEKYNLNVRITPNQNIILCDI 654
            EPI G  FLPRKFK AV +P  N VD+  ND+  + + D+NG+  GFN+ VGGG+   H    T+P +   LG+VP E  L A + +V TQR+ G R DRK +R++Y I +  ++ FR+ VE+    KFEP R     E    +GW +  D      L +++GRI  K +K L     E+ + +  + RIT NQN+I+ ++
Sbjct:  211 EPILGKTFLPRKFKTAVAIPPLNDVDVYANDLNFIAIQDDNGQLCGFNVLVGGGLSFEHGNTKTYPNVAYSLGFVPLEHTLAAAEGVVKTQRDFGNRSDRKNARVRYTIQNMTLDGFRAEVERCMNIKFEPTRPYEFTERGDRIGWVKGIDNNWHLTLFIESGRITDKPEKPLMTGVLELAKVHKGDFRITANQNLIVANV 411          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_ACTP7 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=cysI PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.332e-35
Identity = 79/201 (39.30%), Postives = 116/201 (57.71%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAGKMKKTLR----EIIEKYNLNVRITPNQNIILCDI 654
            EPI G  +LPRKFK AV +P  N VD+  ND+  + + DENG+  GFN+ VGGG+   H    T+P +   LG+VP E  L A + +V TQR+ G R DRK +R++Y I +  ++ FR+ VE+    KFEP R     E    +GW +  D      L +++GRI  K +K L     E+ + +  + RIT NQN+I+ ++
Sbjct:  211 EPILGKTYLPRKFKTAVAIPPLNDVDVYANDLNFIAIQDENGQLCGFNVLVGGGLSFEHGNTKTYPNVAYSLGFVPLEHTLAAAEGVVKTQRDFGNRSDRKNARVRYTIQNMTLDGFRAEVERCMNIKFEPTRPYEFTERGDRIGWVKGIDNNWHLTLFIESGRITDKPEKPLMTGVLELAKVHKGDFRITANQNLIVANV 411          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_PSYIN (Sulfite reductase [NADPH] hemoprotein beta-component OS=Psychromonas ingrahamii (strain 37) GN=cysI PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.739e-35
Identity = 85/206 (41.26%), Postives = 119/206 (57.77%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI---AGK-MKKTLREIIEKYNLNVRITPNQNIILCDIRKAWK 669
            EPIYG   LPRKFK  V +P  N VD+  ND+  V +  EN +  GFN+ VGGG+G TH  +TTFPR  +  G++  EDIL   KA+V TQR+ G R  R ++R KY + + G+EKF+  VE   G KF P R     E    +GW +  D      + ++NGRI    GK +K  L EI + +  + R+T NQN+I+  + ++ K
Sbjct:  195 EPIYGETMLPRKFKTTVVLPPFNDVDVHANDLNFVAIV-ENEKIVGFNVLVGGGLGITHGDKTTFPRKADDFGFIAAEDILEIAKAVVTTQRDLGGRTSRSHARTKYTLETHGVEKFKGEVESRSGIKFLPSRPYEFTERGDRIGWIKGTDKKWHLTVFIENGRILDYPGKPLKSGLVEIAKVHQGDFRMTANQNLIIASVPESEK 399          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_ACTPJ (Sulfite reductase [NADPH] hemoprotein beta-component OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=cysI PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.739e-35
Identity = 78/201 (38.81%), Postives = 116/201 (57.71%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAGKMKKTLR----EIIEKYNLNVRITPNQNIILCDI 654
            EPI G  +LPRKFK AV +P  N VD+  ND+  + + DENG+  GFN+ VGGG+   H    T+P +   LG+VP E  L A + +V TQR+ G R DRK +R++Y + +  ++ FR+ VE+    KFEP R     E    +GW +  D      L +++GRI  K +K L     E+ + +  + RIT NQN+I+ ++
Sbjct:  211 EPILGKTYLPRKFKTAVAIPPLNDVDVYANDLNFIAIQDENGQLCGFNVLVGGGLSFEHGNTKTYPNVAYSLGFVPLEHTLAAAEGVVKTQRDFGNRSDRKNARVRYTVQNMTLDGFRAEVERCMNIKFEPTRPYEFTERGDRIGWVKGIDNNWHLTLFIESGRITDKPEKPLMTGVLELAKVHKGDFRITANQNLIVANV 411          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_METEP (Sulfite reductase [NADPH] hemoprotein beta-component OS=Methylobacterium extorquens (strain PA1) GN=cysI PE=3 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.271e-35
Identity = 80/202 (39.60%), Postives = 114/202 (56.44%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI-----AGKMKKTLREIIEKYNLNVRITPNQNIILCDI 654
            EP+YG  +LPRKFK  V VP  N VDI  +D+G + + D+     G+N+ VGGGMG TH    TFPR  + LG+V  ED L A +A++  QR+ G R +RK +R+KY I  +G++ FR+ VE+  GKK    +           GW E  DG     L+V +GRI       +    LR I E +  + R+T NQN+I+ ++
Sbjct:  237 EPVYGKTYLPRKFKTVVAVPPSNEVDIFAHDLGFIAILDKKNRVTGWNVTVGGGMGMTHGETDTFPRTADVLGFVQPEDALKAAEAVMTVQRDWGNRKNRKNARLKYTIERFGLDAFRAEVEKRIGKKLGAPKPFTFDGNGDRYGWVEGDDGRHHLTLYVPSGRIKDIEGGPQFLSGLRRIAEVHEGDFRLTGNQNVIIANV 438          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_METEA (Sulfite reductase [NADPH] hemoprotein beta-component OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=cysI PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.271e-35
Identity = 80/202 (39.60%), Postives = 114/202 (56.44%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI-----AGKMKKTLREIIEKYNLNVRITPNQNIILCDI 654
            EP+YG  +LPRKFK  V VP  N VDI  +D+G + + D+     G+N+ VGGGMG TH    TFPR  + LG+V  ED L A +A++  QR+ G R +RK +R+KY I  +G++ FR+ VE+  GKK    +           GW E  DG     L+V +GRI       +    LR I E +  + R+T NQN+I+ ++
Sbjct:  237 EPVYGKTYLPRKFKTVVAVPPSNEVDIFAHDLGFIAILDKKNRVTGWNVTVGGGMGMTHGESDTFPRTADVLGFVQPEDALKAAEAVMTVQRDWGNRKNRKNARLKYTIERFGLDAFRAEVEKRIGKKLGAPKPFTFDGNGDRYGWVEGEDGRHHLTLYVPSGRIKDIEGGPQFLSGLRRIAEVHEGDFRLTGNQNVIIANV 438          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_METC4 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=cysI PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.271e-35
Identity = 80/202 (39.60%), Postives = 114/202 (56.44%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI-----AGKMKKTLREIIEKYNLNVRITPNQNIILCDI 654
            EP+YG  +LPRKFK  V VP  N VDI  +D+G + + D+     G+N+ VGGGMG TH    TFPR  + LG+V  ED L A +A++  QR+ G R +RK +R+KY I  +G++ FR+ VE+  GKK    +           GW E  DG     L+V +GRI       +    LR I E +  + R+T NQN+I+ ++
Sbjct:  237 EPVYGKTYLPRKFKTVVAVPPSNEVDIFAHDLGFIAILDKKNRVTGWNVTVGGGMGMTHGEADTFPRTADVLGFVQPEDALKAAEAVMTVQRDWGNRKNRKNARLKYTIERFGLDAFRAEVEKRIGKKLGAPKPFTFDGNGDRYGWVEGDDGRHHLTLYVPSGRIKDIEGGPQFLSGLRRIAEVHEGDFRLTGNQNVIIANV 438          
BLAST of CN188918 vs. ExPASy Swiss-Prot
Match: CYSI_METRJ (Sulfite reductase [NADPH] hemoprotein beta-component OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=cysI PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.966e-35
Identity = 78/202 (38.61%), Postives = 114/202 (56.44%), Query Frame = 1
Query:   64 EPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRI-----AGKMKKTLREIIEKYNLNVRITPNQNIILCDI 654
            EP+YG  +LPRKFK  V VP  N VDI  +D+G + + D+  +  G+N+ VGGGMG TH    TFPR  + +G+V  ED L   +A++  QR+ G R +RK +R+KY I  +G++ FR+ VE+  GKK    +           GW E  DG     L+V +GRI       +    LR I E +  + R+T NQN+I+ ++
Sbjct:  238 EPVYGRTYLPRKFKTVVAVPPSNEVDIFAHDLGFIAILDKKNQVTGWNVTVGGGMGMTHGEPDTFPRTADVMGFVKPEDALKVAEAVMTVQRDWGNRKNRKNARLKYTIERYGLDAFRAEVEKRVGKKLGAPKPFTFTGNGDRYGWVEGDDGRHHLTLYVPSGRIKDIDGGPQFLSGLRRIAEVHQGDFRLTGNQNVIIANV 439          
The following BLAST results are available for this feature:
BLAST of CN188918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 192
Match NameE-valueIdentityDescription
CYSI_SHEDO3.504e-3639.71Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_BORPD5.977e-3636.54Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_ACTPL1.332e-3539.30Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_ACTP71.332e-3539.30Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_PSYIN1.739e-3541.26Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_ACTPJ1.739e-3538.81Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_METEP2.271e-3539.60Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_METEA2.271e-3539.60Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_METC42.271e-3539.60Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_METRJ2.966e-3538.61Sulfite reductase [NADPH] hemoprotein beta-compone... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001A16_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001A16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188918 ID=CN188918; Name=CN188918; organism=Citrus sinensis; type=EST; length=714bp
GAGGCTGAAGTGGTAAAGGCACGTAATGATAATTCTCATGGAACAAATTT
CCCTGATTCTCCTGAGCCCATCTATGGGACTCAGTTCTTGCCAAGGAAGT
TCAAAGTTGCAGTAACGGTGCCAACAGATAACTCGGTGGATATTCTTACT
AATGATATTGGTGTTGTTGTTGTTTCTGATGAAAATGGGGAACCTCAGGG
ATTCAACTTATATGTTGGTGGTGGTATGGGAAGAACGCATCGGTTGGAAA
CCACATTTCCCCGTCTTGGAGAACAGTTGGGCTATGTGCCAAAAGAGGAC
ATTCTATATGCTGTGAAAGCTATTGTTGTTACCCAAAGAGAAAATGGGAG
GAGAGATGATCGCAAGTATAGTAGAATGAAATATTTGATCAGCTCCTGGG
GAATTGAGAAGTTTAGAAGTGTTGTTGAGCAATATTATGGAAAGAAATTT
GAGCCTTTCCGTCAATTGCCAGAGTGGGAATTTAAAAGTCATTTGGGATG
GCATGAGCAGGGGGATGGTGGTTTATTTTGTGGACTTCATGTTGATAATG
GTCGTATTGCGGGTAAAATGAAGAAGACATTGAGGGAGATAATAGAGAAG
TATAACTTAAATGTGCGGATCACTCCTAACCAGAATATTATCTTGTGTGA
CATTCGTAAAGCATGGAAGCGTCCCCATCACTACAGCTCTCGCACAGGGT
GGACTGCTGCTTTC
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