CN188910

Overview
NameCN188910
Unique NameCN188910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.104e-26
Identity = 69/171 (40.35%), Postives = 97/171 (56.73%), Query Frame = 3
Query:   99 DWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED 611
            DWR    ++ VK+QG CG+CW F+T  SLE+ +     + I+LSEQQ++DC   F + GCNGGL   AFE I   GG+  E  YPY   +  C+ +S    VQV D        E++L+  + LV P+ +A +  D    YK G+     C N+   +NHAV+ VGYGVE+
Sbjct:  117 DWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDC--DFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVN-YKQGIIK--YCFNS--GLNHAVLLVGYGVEN 280          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.104e-26
Identity = 61/173 (35.26%), Postives = 99/173 (57.23%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            +P++ DWR+SG ++ VK+QG CGSCW F++  ++E+ Y    G  +SLSEQQ++DCA ++   GC GG  ++A+ +I  N G+ +   YPY    G CK +       +     +    E  + +AV   +P++ A +    F+ YK GV++   CG     +NHA+V +GYG
Sbjct:  123 VPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDCAVSY---GCKGGWINKAYSFIISNKGVASAAIYPYKAAKGTCKTNGVPNSAYITRYTYVQRNNERNMMYAVS-NQPIAAALDASGNFQHYKRGVFTG-PCGTR---LNHAIVIIGYG 287          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: ACP2_ENTHI (Cysteine proteinase ACP2 (Fragment) OS=Entamoeba histolytica GN=ACP2 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.442e-26
Identity = 71/182 (39.01%), Postives = 101/182 (55.49%), Query Frame = 3
Query:   87 PETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFG---KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV--GLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            PE+ DWR+ G ++P++DQ  CGSC+TF +  +LE       G     + LSE+ +  C +   N GCNGGL S  ++YI    G+  E  YPYTG D  CK + ++   ++     +    E EL+ A+  GL+    V+ +V    F+ YKSG Y+ TKC N    +NH V AVGYGV DG
Sbjct:   91 PESVDWRKEGKVTPLRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHM-QCTRDNGNNGCNGGLGSNVYDYI-IEHGVAKESDYPYTGSDSTCKTNVKSFR-KITGYTKVPRNNEAELKAALSQGLL---DVSIDVSSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDG 266          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.883e-26
Identity = 67/173 (38.73%), Postives = 98/173 (56.65%), Query Frame = 3
Query:   99 DWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSEN-VGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            DWRE   ++ +K+QG CG+CW F+T  S+E+ +     + I LSEQQL+DC     + GCNGGL   AFE I   GG+ TE  YP+ G++  C         V ++      +  E++L+  +  V P+ +A +  D   +Y+ GV SS  C N    +NHAV+ VGYGVE+G
Sbjct:  149 DWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCDSV--DMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRNRRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVNYYR-GVISS--CENN--GLNHAVLLVGYGVENG 314          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.883e-26
Identity = 68/172 (39.53%), Postives = 98/172 (56.98%), Query Frame = 3
Query:   99 DWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            DWR    ++ VK+QG CG+CW F+T GSLE+ +     + I+LSEQQL+DC   F + GC+GGL   A+E +   GG+  E  YPY   +G C+ ++    V+V       L  E++L+  + +V P+ VA +  D    YK GV     C N    +NHAV+ VGY VE+G
Sbjct:  118 DWRRLNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDC--DFVDMGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGDCRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAIDASDIVN-YKRGVI--RYCAN--HGLNHAVLLVGYAVENG 282          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.883e-26
Identity = 59/173 (34.10%), Postives = 99/173 (57.23%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            +P++ DWR+ G ++ VK+Q  CGSCW+F+   ++E  Y    G  +SLSEQ+++DCA ++   GC GG  ++A+++I  N G+ TEE YPY    G C  +S      +     +    E  + +AV   +P++   +  + F++Y  GV+S   CG +   +NHA+  +GYG
Sbjct:  123 VPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDCAVSY---GCKGGWVNKAYDFIISNNGVTTEENYPYLAYQGTCNANSFPNSAYITGYSYVRRNDERSMMYAVS-NQPIAALIDASENFQYYNGGVFSG-PCGTS---LNHAITIIGYG 287          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.460e-26
Identity = 68/171 (39.77%), Postives = 97/171 (56.73%), Query Frame = 3
Query:   99 DWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED 611
            DWR    ++ VK+QG CG+CW F+T  SLE+ +     + I+LSEQQ++DC   F + GCNGGL   AFE I   GG+  E  YPY   +  C+ ++    VQV D        E++L+  + LV P+ +A +  D    YK G+     C N+   +NHAV+ VGYGVE+
Sbjct:  117 DWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDC--DFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVN-YKQGIIK--YCFNS--GLNHAVLLVGYGVEN 280          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 3.212e-26
Identity = 71/181 (39.23%), Postives = 97/181 (53.59%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV---NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            LPE  DWR+ G ++PV+ QG CGSCW FS   ++E       GK + LSEQ+LVDC +   + GC GG P  A EY+  N G+     YPY  K G C+  ++ VG  ++ +     +    E  L +A+   +PVSV  E     F+ YK G++    CG     V+HAV AVGYG   G
Sbjct:  133 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER--RSHGCKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCR--AKQVGGPIVKTSGVGRVQPNNEGNLLNAIA-KQPVSVVVESKGRPFQLYKGGIFEG-PCGT---KVDHAVTAVGYGKSGG 303          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.195e-26
Identity = 62/173 (35.84%), Postives = 97/173 (56.07%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            +P++ DWR+ G ++ VK+Q  CG+CW F+   ++E+ Y    G    LSEQQ++DCA+ +   GC GG   +AFE+I  N G+ +   YPY    G CK         +     +    E  + +AV   +P++VA +    F++YKSGV++   CG +   +NHAV A+GYG
Sbjct:    2 VPQSIDWRDYGAVTSVKNQNPCGACWAFAAIATVESIYKIKKGILEPLSEQQVLDCAKGY---GCKGGWEFRAFEFIISNKGVASGAIYPYKAAKGTCKTDGVPNSAYITGYARVPRNNESSMMYAVS-KQPITVAVDANANFQYYKSGVFNG-PCGTS---LNHAVTAIGYG 166          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.479e-26
Identity = 67/172 (38.95%), Postives = 98/172 (56.98%), Query Frame = 3
Query:   99 DWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            DWR    ++ VK+QG CG+CW F+T GSLE+ +     + I+LSEQQL+DC   F + GC+GGL   A+E +   GG+  E  YPY   +G C+ ++    V+V          E++L+  + +V P+ VA +  D    YK G+     C N    +NHAV+ VGYGVE+G
Sbjct:  118 DWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDC--DFVDVGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGPCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAIDASD-IVGYKRGII--RYCEN--HGLNHAVLLVGYGVENG 282          
The following BLAST results are available for this feature:
BLAST of CN188910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
CATV_NPVAC1.104e-2640.35Viral cathepsin OS=Autographa californica nuclear ... [more]
ANAN_ANACO1.104e-2635.26Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
ACP2_ENTHI1.442e-2639.01Cysteine proteinase ACP2 (Fragment) OS=Entamoeba h... [more]
CATV_NPVLD1.883e-2638.73Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATV_NPVCD1.883e-2639.53Viral cathepsin OS=Choristoneura fumiferana defect... [more]
BROM1_ANACO1.883e-2634.10Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CATV_NPVRO2.460e-2639.77Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
PAPA3_CARPA3.212e-2639.23Caricain OS=Carica papaya PE=1 SV=2[more]
BROM2_ANACO4.195e-2635.84Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
CATV_NPVAP5.479e-2638.95Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001A11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188910 ID=CN188910; Name=CN188910; organism=Citrus sinensis; type=EST; length=614bp
GACGGTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCTGCCACT
ACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGA
CTGGAGGGAATCTGGCATATTAAGCCCAGTTAAAGACCAAGGTCACTGTG
GATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCAC
CAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTG
TGCCCAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCATCCCAAG
CCTTTGAATACATCAAGTACAATGGTGGCCTTGATACTGAGGAAGCATAT
CCCTACACCGGAAAAGATGGTGTCTGCAAATTCTCATCTGAAAATGTTGG
CGTCCAAGTCCTGGACTCAGTCAACATTACCTTGGGTGCTGAAGATGAAT
TACAGCATGCAGTTGGTCTTGTTCGACCTGTGAGTGTGGCATTTGAAGTA
GTAGATGGATTCCGATTTTACAAGAGTGGAGTTTACAGCAGCACTAAATG
TGGAAATACTCCCATGGATGTGAACCATGCTGTCGTTGCTGTTGGGTACG
GAGTTGAAGATGGT
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