CN188910

Overview
NameCN188910
Unique NameCN188910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 9.325e-34
Identity = 79/175 (45.14%), Postives = 105/175 (60.00%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSEN-VGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            +P + DWR+ G ++ VKDQG CGSCW FST  ++E        K +SLSEQ+LVDC +   NQGCNGGL   AFE+IK  GG+ TE  YPYT ++G C  S  N + V +    N+ +  E+ L  AV   +PVSVA +     F+FY  GV++    G+   D+NH V  VGYG
Sbjct:  128 VPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKE-ENQGCNGGLMESAFEFIKQKGGITTESNYPYTAQEGTCDESKVNDLAVSIDGHENVPVNDENALLKAVA-NQPVSVAIDAGGSDFQFYSEGVFT----GDCNTDLNHGVAIVGYG 296          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.591e-33
Identity = 85/188 (45.21%), Postives = 109/188 (57.98%), Query Frame = 3
Query:   69 LTADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS----SENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDG 614
            L    LP + DWR+ G ++ VKDQG CGSCW FST  S+E       G  +SLSEQ+L+DC  A +N GC GGL   AFEYIK NGGL TE AYPY    G C  +    +  V V +    ++   +E++L  AV   +PVSVA E     F FY  GV++  +CG    +++H V  VGYGV EDG
Sbjct:  129 LNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA-DNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVA-NQPVSVAVEASGKAFMFYSEGVFTG-ECGT---ELDHGVAVVGYGVAEDG 310          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.591e-33
Identity = 69/175 (39.43%), Postives = 104/175 (59.43%), Query Frame = 3
Query:   81 VLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            +LP+  DWR+ G ++PV+ QG C +CW F+ TG++EA      GK   LS Q LVDC++   N GC GG    AF+Y+ +NGGL++E  YPY GKDG C+++ +N   ++   V++   +ED L  AV  + P++   +   + F+ YK G+Y    C +    V H V+ VGYG
Sbjct:  114 ILPKFVDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKDGPCRYNPKNSKAEITGFVSLP-QSEDILMAAVATIGPITAGIDASHESFKNYKGGIYHEPNCSSD--TVTHGVLVVGYG 285          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.077e-33
Identity = 78/175 (44.57%), Postives = 103/175 (58.86%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSEN-VGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            +P + DWR+ G ++ VKDQG CGSCW FST  ++E        K ++LSEQ+LVDC +   NQGCNGGL   AFE+IK  GG+ TE  YPY  ++G C  S  N + V +    N+    ED L  AV   +PVSVA +     F+FY  GV++    G+   D+NH V  VGYG
Sbjct:  128 VPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKE-ENQGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGTCDASKVNDLAVSIDGHENVPANDEDALLKAVA-NQPVSVAIDAGGSDFQFYSEGVFT----GDCSTDLNHGVAIVGYG 296          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.713e-33
Identity = 84/188 (44.68%), Postives = 108/188 (57.45%), Query Frame = 3
Query:   69 LTADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS----SENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDG 614
            L    LP + DWR+ G ++ VKDQG CGSCW FST  S+E       G  +SLSEQ+L+DC  A +N GC GGL   AFEYIK NGGL TE AYPY    G C  +    +  V V +    ++   +E++L  AV   +PVSVA E     F FY  GV++    G+   +++H V  VGYGV EDG
Sbjct:  129 LNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA-DNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVA-NQPVSVAVEASGKAFMFYSEGVFT----GDCGTELDHGVAVVGYGVAEDG 310          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.713e-33
Identity = 80/177 (45.20%), Postives = 103/177 (58.19%), Query Frame = 3
Query:   78 DVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDS-VNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            D +P + DWR+ G ++ VKDQG CGSCW FST  ++E        K +SLSEQ+LVDC     NQGCNGGL   AFE+IK  GG+ TE  YPY   DG C  S EN     +D   N+    E+ L  AV   +PVSVA +     F+FY  GV++ + CG    +++H V  VGYG
Sbjct:  124 DTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDC-DTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVA-NQPVSVAIDAGGSDFQFYSEGVFTGS-CGT---ELDHGVAIVGYG 294          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.713e-33
Identity = 72/184 (39.13%), Postives = 106/184 (57.61%), Query Frame = 3
Query:   69 LTADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG--FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            LT    PE+ DWR  G++ PV++QG CGSCW  ST  ++E+      G  + LS QQLVDC+ ++ N GCNGG     FEY+K N GL+++  YPY+GK+  CK + ++  V  L        +E  L+ AVG + P+S    VV G   + Y  G++  + C     +++H V  VGYG+E+G
Sbjct:  105 LTVGAAPESIDWRSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSYGNHGCNGGFAVNGFEYVKDN-GLESDADYPYSGKEDKCKANDKSRSVVELTGYKKVTASETSLKEAVGTIGPISA---VVFGKPMKSYGGGIFDDSSCLGD--NLHHGVNVVGYGIENG 282          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.894e-33
Identity = 88/210 (41.90%), Postives = 112/210 (53.33%), Query Frame = 3
Query:    6 FQRHRLGAAQNCSATTKGNHK--LTADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFN-------NQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGF-RFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            F++  LG           N    L  + LPE  DWR+ G ++PVK+QG CGSCW+FS TG+LE A   A GK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE YPYTGKDG  CK     +   V    N ++ + DE Q A  LV+   +A  +  G+ + Y  GV     C      +NH V+ VGYG
Sbjct:  107 FRKKHLGVRSGFKLPKDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKI---VASVSNFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYICTRR---LNHGVLLVGYG 310          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.031e-32
Identity = 79/203 (38.92%), Postives = 109/203 (53.69%), Query Frame = 3
Query:   18 RLGAAQNCSATTKGNHKLTADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA--QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV--DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            R+    N S T K +   T   LP++ DWRE G ++ VK QG CGSCW FS  G+LE       GK +SLS Q LVDC+  + + N+GC GG  ++AF+YI  +  +D+E +YPY   D  C +  +N        + +  G E+ L+ AV    PVSV  +      F  Y+SGVY    C     ++NH V+ VGYG  DG
Sbjct:   94 RIPRPWNRSGTLKSSSNQT---LPDSVDWREKGCVTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGGGFMTEAFQYI-IDTSIDSEASYPYKAMDEKCLYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSCTE---NMNHGVLVVGYGTLDG 289          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.346e-32
Identity = 88/201 (43.78%), Postives = 108/201 (53.73%), Query Frame = 3
Query:    6 FQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSG-VYSSTKCGNTPMDVNHAVVAVGYG 602
            F +  LG       TT  N K      PE+ DWR   I++P KDQG CGSCWTF TT  LE   ++  GK  S SEQQLVDC  + N  GC GG PS + ++I+ N GL  E  YPY    G CK   +NV   V  S  +T G+E  LQ  +    PV+V  +     F+ YK G +YS TKC +  M  NH V AVGYG
Sbjct:   68 FIQTHLGMTYEVPETTS-NVKAAVKAAPESVDWRS--IMNPAKDQGQCGSCWTFCTTAVLEGRVNKDLGKLYSFSEQQLVDCDASDN--GCEGGHPSNSLKFIQENNGLGLESDYPYKAVAGTCK-KVKNVAT-VTGSRRVTDGSETGLQTIIAENGPVAVGMDASRPSFQLYKKGTIYSDTKCRSRMM--NHCVTAVGYG 259          
The following BLAST results are available for this feature:
BLAST of CN188910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
CYSEP_VIGMU9.325e-3445.14Vignain OS=Vigna mungo PE=1 SV=1[more]
CYSP2_HORVU1.591e-3345.21Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CATR_MOUSE1.591e-3339.43Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CYSEP_PHAVU2.077e-3344.57Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CYSP1_HORVU2.713e-3344.68Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
CYSEP_RICCO2.713e-3345.20Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CATLL_PHACE2.713e-3339.13Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
RD19A_ARATH7.894e-3341.90Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CATS_RAT1.031e-3238.92Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
ACP1_ENTHI1.346e-3243.78Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001A11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188910 ID=CN188910; Name=CN188910; organism=Citrus sinensis; type=EST; length=614bp
GACGGTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCTGCCACT
ACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGA
CTGGAGGGAATCTGGCATATTAAGCCCAGTTAAAGACCAAGGTCACTGTG
GATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCAC
CAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTG
TGCCCAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCATCCCAAG
CCTTTGAATACATCAAGTACAATGGTGGCCTTGATACTGAGGAAGCATAT
CCCTACACCGGAAAAGATGGTGTCTGCAAATTCTCATCTGAAAATGTTGG
CGTCCAAGTCCTGGACTCAGTCAACATTACCTTGGGTGCTGAAGATGAAT
TACAGCATGCAGTTGGTCTTGTTCGACCTGTGAGTGTGGCATTTGAAGTA
GTAGATGGATTCCGATTTTACAAGAGTGGAGTTTACAGCAGCACTAAATG
TGGAAATACTCCCATGGATGTGAACCATGCTGTCGTTGCTGTTGGGTACG
GAGTTGAAGATGGT
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