CN188910

Overview
NameCN188910
Unique NameCN188910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.000e-32
Identity = 77/192 (40.10%), Postives = 107/192 (55.73%), Query Frame = 3
Query:   48 TTKGNHKLTAD-VLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC--KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            T+   +K +AD VLP++ DWR  G ++ VKDQGHC SCW FST G++E       G+ ++LSEQ L++C +   N GC GG    A+E+I  NGGL T+  YPY   +GVC  +    N  V +    N+    E  L  AV      +V       F+ Y+SGV+  + CG    ++NH VV VGYG E+G
Sbjct:  124 TSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNK--ENNGCGGGKLETAYEFIMKNGGLGTDNDYPYKAVNGVCDGRLKENNKNVMIDGYENLPANDESALMKAVAHQPVTAVIDSSSREFQLYESGVFDGS-CGT---NLNHGVVVVGYGTENG 309          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.918e-32
Identity = 76/186 (40.86%), Postives = 107/186 (57.53%), Query Frame = 3
Query:   69 LTADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFN-------NQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGF-RFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            L  D LP+  DWR+ G + PVK+QG CGSCW+FS +G+LE A++ A GK   LSEQQ VDC    +       + GCNGGL + AF Y++  GGL++E+ YPYTG DG CKF    +   V    N ++ + DE Q +  L++   +A  +   + + Y  GV     CG     ++H V+ VGYG
Sbjct:  132 LPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDGKCKFDKSKI---VASVQNFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGGVSCPYICGR---HLDHGVLLVGYG 311          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.140e-31
Identity = 76/169 (44.97%), Postives = 102/169 (60.36%), Query Frame = 3
Query:   78 DVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNH 578
            DVLP++ DWRE G + PVK+QG CGSCW F    ++E       G  ISLSEQQLVDC+    N GC GG P +AF+YI  NGG+++EE YPYTG +G C  + EN  V  +DS  N+    E  LQ AV   +PVSV  +     F+ Y++G+++    G+  +  NH
Sbjct:    1 DVLPDSIDWREKGAVVPVKNQGGCGSCWAFDAIAAVEGINQIVTGDLISLSEQQLVDCST--RNHGCEGGWPYRAFQYIINNGGINSEEHYPYTGTNGTCD-TKENAHVVSIDSYRNVPSNDEKSLQKAVA-NQPVSVTMDAAGRDFQLYRNGIFT----GSCNISANH 161          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.489e-31
Identity = 75/181 (41.44%), Postives = 107/181 (59.12%), Query Frame = 3
Query:   78 DVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF-SSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            + +P++ DWR+ G ++ VK+QG CGSCW FST  ++E       G   +LSEQ+L+DC   +NN GCNGGL   AFEYI  NGGL  EE YPY+ ++G C+    E+  V +    ++    E  L  A+   +P+SVA +     F+FY  GV+   +CG   +D++H V AVGYG   G
Sbjct:  136 EAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNN-GCNGGLMDYAFEYIVKNGGLRKEEDYPYSMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALA-HQPLSVAIDASGREFQFYSGGVFDG-RCG---VDLDHGVAAVGYGSSKG 310          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.489e-31
Identity = 87/211 (41.23%), Postives = 112/211 (53.08%), Query Frame = 3
Query:    6 FQRHRLGAAQNCSATTKGNHK--LTADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDC-------AQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            F+R  LG           N    L    LPE  DWR+ G ++PVK+QG CGSCW+FSTTG+LE A+  A GK +SLSEQQLVDC        +   + GCNGGL + AFEY    GGL  E+ YPYTG D G CK     +   V    N ++ + +E Q A  L++  P++VA       + Y  GV     C      +NH V+ VGYG
Sbjct:  104 FRRKHLGVKGGFKLPKDANQAPILPTQNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKI---VASVSNFSVVSINEDQIAANLIKNGPLAVAINAA-YMQTYIGGVSCPYICSRR---LNHGVLLVGYG 307          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.539e-31
Identity = 76/192 (39.58%), Postives = 106/192 (55.21%), Query Frame = 3
Query:   48 TTKGNHKLT-ADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC--KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDG 614
            T+   +K +  DVLP++ DWR  G ++ VKDQG C SCW FST G++E       G+ ++LSEQ L++C +   N GC GG    A+E+I  NGGL T+  YPY   +GVC  +   +N  V +    N+    E  L  AV      +V       F+ Y+SGV+  T CG    ++NH VV VGYG E+G
Sbjct:  131 TSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNK--ENNGCGGGKVETAYEFIMNNGGLGTDNDYPYKALNGVCEGRLKEDNKNVMIDGYENLPANDEAALMKAVAHQPVTAVVDSSSREFQLYESGVFDGT-CGT---NLNHGVVVVGYGTENG 316          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.317e-31
Identity = 76/178 (42.70%), Postives = 107/178 (60.11%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED 611
            +P+  DWRE G ++ VK+QG CGSCW FSTTG++E+ + +  GK +SLSEQQLVDC     + GCNGGLPS A+E I   GGL  E+ YPY  K+  C   ++ V V +  SVN+T   +DE + A  L     +SV    +   +FY+ G+        +   ++HAV+ VGYGV +
Sbjct:  105 IPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGL--DDGCNGGLPSNAYESIIKMGGLMLEDNYPYDAKNEKCHLKTDGVAVYINSSVNLT---QDETELAAWLYHNSTISVGMNAL-LLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSE 276          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.317e-31
Identity = 75/181 (41.44%), Postives = 107/181 (59.12%), Query Frame = 3
Query:   66 KLTADVLPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            K   D+ P   DWR  G ++ VKDQG CGSCW FS TG++E  +    G  +SLSEQ+L+DC +   ++ C GGLPS A+  IK  GGL+TE+ Y Y G    C FS+E   V + DSV +   +++E + A  L +  P+SVA     G +FY+ G+    +   +P  ++HAV+ VGYG
Sbjct:  265 KSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKM--DKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDSVEL---SQNEQKLAAWLAKRGPISVAINAF-GMQFYRHGISRPLRPLCSPWLIDHAVLLVGYG 439          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.657e-31
Identity = 75/170 (44.12%), Postives = 105/170 (61.76%), Query Frame = 3
Query:   99 DWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDS-VNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG 602
            DWR  G ++ VKDQG CGSCW FST  S+E       G+ +SLSEQ+LVDC  ++ N+GCNGGL   AFE+I+ N G+ TE++YPY  +DG C  +  N  V  +D   ++    E+ L  AV   +P+SV+ E    GF+FY  GV++  +CG    +++H V  VGYG
Sbjct:  135 DWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCDTSY-NEGCNGGLMDYAFEFIQKN-GITTEDSYPYAEQDGTCASNLLNSPVVSIDGHQDVPANNENALMQAVA-NQPISVSIEASGYGFQFYSEGVFTG-RCGT---ELDHGVAIVGYG 297          
BLAST of CN188910 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.646e-30
Identity = 73/187 (39.04%), Postives = 112/187 (59.89%), Query Frame = 3
Query:   84 LPETKDWRESGILSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDC--------AQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED 611
            +P   DWR  G ++PVK+QG CGSCW+FSTTG++E  +  +  K +SLSEQ LVDC         +   ++GCNGGL   A+ YI  NGG+ TE +YPYT + G  C F+S N+G ++    N T+  ++E   A  +V   P+++A + V+ ++FY  GV+    C   P  ++H ++ VGY  ++
Sbjct:  118 IPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKI---SNFTMIPKNETVMAGYIVSTGPLAIAADAVE-WQFYIGGVF-DIPC--NPNSLDHGILIVGYSAKN 297          
The following BLAST results are available for this feature:
BLAST of CN188910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
CPR3_ARATH3.000e-3240.10Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CYSP1_MAIZE3.918e-3240.86Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CPGP1_ZINOF1.140e-3144.97Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
XCP2_ARATH1.489e-3141.44Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
A494_ARATH1.489e-3141.23Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CPR4_ARATH2.539e-3139.58Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CATL_SCHMA3.317e-3142.70Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CATF_HUMAN3.317e-3141.44Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CYSP_HEMSP5.657e-3144.12Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CYSP1_DICDI1.646e-3039.04Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001A11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188910 ID=CN188910; Name=CN188910; organism=Citrus sinensis; type=EST; length=614bp
GACGGTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCTGCCACT
ACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGA
CTGGAGGGAATCTGGCATATTAAGCCCAGTTAAAGACCAAGGTCACTGTG
GATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCAC
CAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTG
TGCCCAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCATCCCAAG
CCTTTGAATACATCAAGTACAATGGTGGCCTTGATACTGAGGAAGCATAT
CCCTACACCGGAAAAGATGGTGTCTGCAAATTCTCATCTGAAAATGTTGG
CGTCCAAGTCCTGGACTCAGTCAACATTACCTTGGGTGCTGAAGATGAAT
TACAGCATGCAGTTGGTCTTGTTCGACCTGTGAGTGTGGCATTTGAAGTA
GTAGATGGATTCCGATTTTACAAGAGTGGAGTTTACAGCAGCACTAAATG
TGGAAATACTCCCATGGATGTGAACCATGCTGTCGTTGCTGTTGGGTACG
GAGTTGAAGATGGT
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