CN188901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188901 vs. ExPASy Swiss-Prot
Match: ACL7A_BOVIN (Actin-like protein 7A OS=Bos taurus GN=ACTL7A PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.005e-11 Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = -1 Query: 489 LERICMVTLFSVGVQLCSPVFADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 749 L+R M + G F +R+ KE++++ P+ +V PER +VW GGSILASL FQ +W+ + EY+E GP ++R+CF Sbjct: 353 LKRDLMGNILLCGGSTMLSGFPNRLQKELSSMCPNDTP-QVSVLPERDTAVWTGGSILASLQGFQPLWVHRSEYEEHGPFFLYRRCF 438
BLAST of CN188901 vs. ExPASy Swiss-Prot
Match: ARP4_CANGA (Actin-related protein 4 OS=Candida glabrata GN=ARP4 PE=3 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 2.624e-11 Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = -1 Query: 516 PVFADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWISKGEYDESG 695 P +DR+ E+ P+ +K +V+A ER+Y W+GGSIL+SL TF Q+WI K EY+E G Sbjct: 422 PGLSDRILNELNMKFPA-LKFRVLATGQSIERQYQSWLGGSILSSLGTFHQLWIGKKEYEEVG 483 HSP 2 Score: 32.3426 bits (72), Expect = 2.624e-11 Identity = 13/25 (52.00%), Postives = 18/25 (72.00%), Query Frame = -3 Query: 688 CDGDIRKDLYGNIVLSGGSTMFPGI 762 CD DIR L N+V++GGS+ PG+ Sbjct: 400 CDVDIRASLAHNLVITGGSSTIPGL 424
BLAST of CN188901 vs. ExPASy Swiss-Prot
Match: ARP3_CAEEL (Actin-related protein 3 OS=Caenorhabditis elegans GN=arx-1 PE=2 SV=1) HSP 1 Score: 50.0618 bits (118), Expect = 4.442e-11 Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = -1 Query: 507 LAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSI 656 L P + ++V++ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI Sbjct: 365 LKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414 HSP 2 Score: 38.1206 bits (87), Expect = 4.442e-11 Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = -3 Query: 670 KCDGDIRKDLYGNIVLSGGSTMFPGICRPYEQ 765 +C D+R+ LY NIVLSGGSTMF R ++ Sbjct: 313 QCPIDVRRGLYENIVLSGGSTMFKDFARKLQR 344
BLAST of CN188901 vs. ExPASy Swiss-Prot
Match: ARP4_SCHPO (Actin-related protein 4 OS=Schizosaccharomyces pombe GN=arp4 PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 5.762e-11 Identity = 30/72 (41.67%), Postives = 48/72 (66.67%), Query Frame = -1 Query: 492 FADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWISKGEYDESGP---SIVHRKC 689 F+ R+ E++ L P S ++K+ A ER Y+ W+GGSIL+SL TF Q+WIS+ EY+E G +++ ++C Sbjct: 362 FSLRLQNELSKLYPGS-RLKIHASGHVVERSYASWLGGSILSSLGTFHQLWISRQEYEEHGSDRLALIEKRC 432 HSP 2 Score: 28.8758 bits (63), Expect = 5.762e-11 Identity = 10/25 (40.00%), Postives = 17/25 (68.00%), Query Frame = -3 Query: 691 KCDGDIRKDLYGNIVLSGGSTMFPG 765 +CD DIR L N+++ GG+++ G Sbjct: 337 ECDVDIRASLLNNVIVCGGTSLMQG 361
BLAST of CN188901 vs. ExPASy Swiss-Prot
Match: ACL7A_MACFA (Actin-like protein 7A OS=Macaca fascicularis GN=ACTL7A PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.835e-11 Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = -1 Query: 489 LERICMVTLFSVGVQLCSPVFADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 749 L+R M + G F +R+ KE++++ P+ +V PER +VW GGSILASL FQ +W+ + EY+E GP ++R+CF Sbjct: 350 LKRDLMGNILLCGGSTMLSGFPNRLQKELSSMCPNDTP-QVNVLPERDSAVWTGGSILASLQGFQPLWVHRFEYEEHGPFFLYRRCF 435
BLAST of CN188901 vs. ExPASy Swiss-Prot
Match: ACL7A_HUMAN (Actin-like protein 7A OS=Homo sapiens GN=ACTL7A PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.835e-11 Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = -1 Query: 489 LERICMVTLFSVGVQLCSPVFADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 749 L+R M + G F +R+ KE++++ P+ +V PER +VW GGSILASL FQ +W+ + EY+E GP ++R+CF Sbjct: 350 LKRDLMGNILLCGGSTMLSGFPNRLQKELSSMCPNDTP-QVNVLPERDSAVWTGGSILASLQGFQPLWVHRFEYEEHGPFFLYRRCF 435
BLAST of CN188901 vs. ExPASy Swiss-Prot
Match: ACL7A_RAT (Actin-like protein 7A OS=Rattus norvegicus GN=Actl7a PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.953e-11 Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = -1 Query: 489 LERICMVTLFSVGVQLCSPVFADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 749 L+R M + G F +R+ KE++++ P+ +V PER +VW GGSILASL FQ +W+ + EY+E GP ++R+CF Sbjct: 355 LKRDLMGNILLCGGSTMLRGFPNRLQKELSSMCPNDTP-QVNVLPERDTAVWTGGSILASLQGFQPLWVHRLEYEEHGPFFLYRRCF 440
BLAST of CN188901 vs. ExPASy Swiss-Prot
Match: ACL7A_MOUSE (Actin-like protein 7A OS=Mus musculus GN=Actl7a PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.953e-11 Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = -1 Query: 489 LERICMVTLFSVGVQLCSPVFADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 749 L+R M + G F +R+ KE++++ P+ +V PER +VW GGSILASL FQ +W+ + EY+E GP ++R+CF Sbjct: 355 LKRDLMGNILLCGGSTMLRGFPNRLQKELSSMCPNDTP-QVNVLPERDTAVWTGGSILASLQGFQPLWVHRLEYEEHGPFFLYRRCF 440 The following BLAST results are available for this feature:
BLAST of CN188901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 398
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188901 ID=CN188901; Name=CN188901; organism=Citrus sinensis; type=EST; length=770bpback to top |