CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_CYTH3 (Bifunctional protein folD OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=folD PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.074e-33 Identity = 76/157 (48.41%), Postives = 109/157 (69.43%), Query Frame = -1 Query: 160 PLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 618 P ++P TP G ++LL R+G+E GK+ VV+GRS+IVG P S+L+ R+ +ATV++VH+ TKN +++T +ADI+I A G V +K GAVV+DVG +D D + + G+RL+GDV ++E S I+PVPGGVGPMT+A LL NTL +A Sbjct: 134 PTYLPATPYGIMQLLERNGIETSGKHCVVMGRSHIVGSPMSILMARNTNPGNATVTMVHSRTKNLKELTLQADILIVAIGKPEFVTADMVKEGAVVVDVGIHRID---DATKKSGFRLLGDVKFDEVAPKTSYISPVPGGVGPMTIASLLMNTLQAA 287
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD2_RHIEC (Bifunctional protein folD 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=folD2 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.074e-33 Identity = 79/174 (45.40%), Postives = 111/174 (63.79%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIRS-GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG---YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N G LA + + CTP G + + R+ G ++ G NAVVIGRSN+ G P + LL +ATV+I H+ TKN ++ ADI++AA G +V+ W+KPGA V+DVG ++ P+ E G RL+GDV + E +A ITPVPGGVGPMT+AML++NT+ +A RA G Sbjct: 125 VNAGKLATGDLKTGLVSCTPAGAMVFVRRTHGEDLSGLNAVVIGRSNLFGKPMAQLLLNANATVTIAHSRTKNLAEVCRNADILVAAVGRPEMVKADWVKPGATVIDVG-----INRVPAPEKGEGKTRLVGDVAFREVSEIAGTITPVPGGVGPMTIAMLMANTVIAAHRAAG 293
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD2_PSEU2 (Bifunctional protein folD 2 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=folD2 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.074e-33 Identity = 79/167 (47.31%), Postives = 112/167 (67.07%), Query Frame = -1 Query: 154 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG-YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 651 N+G L+ +GR L PCTP GC+ LL + ++ GK+AVVIGRSNIVG P + LL + H +V++VH+ + + + ADIV+AA G L+ SWLK GAVV+DVG ++ ++G RL+GDV + A +AS ITPVPGGVGPMT+A L+ NT+ +A++ Sbjct: 126 NVGGLS-QGRNVL-TPCTPSGCLHLLEETCGDLSGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDARALCQLADIVVAAVGRPRLIDASWLKRGAVVIDVGINRIE-------DHGRSRLVGDVDFASATEVASAITPVPGGVGPMTIAFLMKNTVTAARQ 283
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD1_SPHWW (Bifunctional protein folD 1 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=folD1 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.074e-33 Identity = 83/170 (48.82%), Postives = 109/170 (64.12%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N+G L++ G + L +PCTP GC+ LL + G AVVIG+SNIVG P ++LL TV++ H LT+N I ADIV+ AAG LVRG W++PGAVV+DVG + S RL+GD ++E + A+ ITPVPGGVGPMTVA LL NTL +A+R G Sbjct: 125 VNVGRLSI-GTDGL-VPCTPLGCMLLLETVIDDFRGLKAVVIGKSNIVGKPVAMLLLERECTVTVTHILTRNLPDIVRTADIVVVAAGSPGLVRGDWVRPGAVVIDVGINRIGEPGKDS-----RLVGDAAFDE-LGHAAAITPVPGGVGPMTVACLLRNTLVAARRQQG 286
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_SYNP6 (Bifunctional protein folD OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=folD PE=3 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.403e-33 Identity = 85/170 (50.00%), Postives = 109/170 (64.12%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 LN+G L +RG E L CTP G +ELL + ++ GK AVVIGRS +VG P +++L +ATV+I H+ T N ++ +ADIV+AA G LV W+KPGAVV+DVG ++ RL+GDV YE A + S ITPVPGGVGPMTVAMLL NT+ S R G Sbjct: 126 LNLGRL-LRGEEGLR-SCTPAGVMELLAANQIDPAGKKAVVIGRSILVGKPLAMMLLEANATVTIAHSRTPNLPEVCRQADIVVAAVGRPELVGADWIKPGAVVVDVGINRLEDG---------RLVGDVDYEAASAITSWITPVPGGVGPMTVAMLLHNTVLSYCRRSG 284
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_SYNE7 (Bifunctional protein folD OS=Synechococcus elongatus (strain PCC 7942) GN=folD PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.403e-33 Identity = 85/170 (50.00%), Postives = 109/170 (64.12%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 LN+G L +RG E L CTP G +ELL + ++ GK AVVIGRS +VG P +++L +ATV+I H+ T N ++ +ADIV+AA G LV W+KPGAVV+DVG ++ RL+GDV YE A + S ITPVPGGVGPMTVAMLL NT+ S R G Sbjct: 126 LNLGRL-LRGEEGLR-SCTPAGVMELLAANQIDPAGKKAVVIGRSILVGKPLAMMLLEANATVTIAHSRTPNLPEVCRQADIVVAAVGRPELVGADWIKPGAVVVDVGINRLEDG---------RLVGDVDYEAASAITSWITPVPGGVGPMTVAMLLHNTVLSYCRRSG 284
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_PSEAE (Bifunctional protein folD OS=Pseudomonas aeruginosa GN=folD PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.403e-33 Identity = 82/168 (48.81%), Postives = 106/168 (63.10%), Query Frame = -1 Query: 148 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 651 NIG LA R PL PCTPKG + LL +G ++ G +AVV+G SNIVG P +L L TV++ H T++ S AD+V+ AAG LV+G W+K GA+V+DVG ++ D RL+GDV YE A + AS ITPVPGGVGPMT A LL NTL +A+ + Sbjct: 127 NIGRLAQR--MPLLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVG---INRQADG------RLVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTLHAAEHLH 283
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_PSEAB (Bifunctional protein folD OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=folD PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.403e-33 Identity = 82/168 (48.81%), Postives = 106/168 (63.10%), Query Frame = -1 Query: 148 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 651 NIG LA R PL PCTPKG + LL +G ++ G +AVV+G SNIVG P +L L TV++ H T++ S AD+V+ AAG LV+G W+K GA+V+DVG ++ D RL+GDV YE A + AS ITPVPGGVGPMT A LL NTL +A+ + Sbjct: 127 NIGRLAQR--MPLLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVG---INRQADG------RLVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTLHAAEHLH 283
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_PSEA8 (Bifunctional protein folD OS=Pseudomonas aeruginosa (strain LESB58) GN=folD PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.403e-33 Identity = 82/168 (48.81%), Postives = 106/168 (63.10%), Query Frame = -1 Query: 148 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 651 NIG LA R PL PCTPKG + LL +G ++ G +AVV+G SNIVG P +L L TV++ H T++ S AD+V+ AAG LV+G W+K GA+V+DVG ++ D RL+GDV YE A + AS ITPVPGGVGPMT A LL NTL +A+ + Sbjct: 127 NIGRLAQR--MPLLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVG---INRQADG------RLVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTLHAAEHLH 283
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_PSEA7 (Bifunctional protein folD OS=Pseudomonas aeruginosa (strain PA7) GN=folD PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.403e-33 Identity = 82/168 (48.81%), Postives = 106/168 (63.10%), Query Frame = -1 Query: 148 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 651 NIG LA R PL PCTPKG + LL +G ++ G +AVV+G SNIVG P +L L TV++ H T++ S AD+V+ AAG LV+G W+K GA+V+DVG ++ D RL+GDV Y+ A R AS ITPVPGGVGPMT A LL NTL +A+ + Sbjct: 127 NIGRLAQR--MPLLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLAAHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVG---INRQADG------RLVGDVEYDVAARRASWITPVPGGVGPMTRACLLENTLHAAEHLH 283 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |