CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_HALOH (Bifunctional protein folD OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=folD PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.403e-33 Identity = 82/166 (49.40%), Postives = 103/166 (62.05%), Query Frame = -1 Query: 157 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 654 +N G L F CTP G IELL R G+EI GK AVV+GRSNIVG P + LL HATV++ H+ T + T +ADI++ AAG LV+G +K GA V+DVGT VD L+GDV +E A + A ITPVPGGVGPMT+AML+ NT+ + K Sbjct: 124 INTGKLFSGMTGQRFEACTPLGIIELLDREGIEIDGKKAVVVGRSNIVGKPVAHLLLERHATVTVCHSHTADLGIETRQADILVVAAGRPKLVKGEMVKEGAAVIDVGTNRVD----------GHLVGDVDFEAARQRAGYITPVPGGVGPMTIAMLMKNTVKARK 279
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_DESAA (Bifunctional protein folD OS=Desulfatibacillum alkenivorans (strain AK-01) GN=folD PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.403e-33 Identity = 81/175 (46.29%), Postives = 108/175 (61.71%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLP-TSLLLQR---HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYR-LMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N+G L + G E F PCTP G E+++R+GVE G VV+GRSNIVG P ++++Q+ ++TV+IVH TK+ ADI+I AAGV LV+ W+K GA V+DVG V + L GDV ++ A +A ITPVPGGVGPMT+ ML+ NTL S K A G Sbjct: 126 VNVGRLMIGGDEVKFAPCTPAGIQEMIVRAGVETSGAEVVVVGRSNIVGKPIANMMVQKGPGANSTVTIVHTRTKDLAAHCQRADILIVAAGVPGLVKPEWIKKGACVIDVGVNRVGTKISEKTGKEIAVLRGDVDFDAAKEIAGSITPVPGGVGPMTITMLMVNTLKSFKFANG 300
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BACSU (Bifunctional protein folD OS=Bacillus subtilis GN=folD PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.403e-33 Identity = 77/167 (46.11%), Postives = 105/167 (62.87%), Query Frame = -1 Query: 154 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 654 LN+G + + E F+PCTP G +ELL ++ +++ GK VV+GRSNIVG P LL +ATV+ H+ T+N + T +ADI++ A G AN + +K GAVV+DVG ++ +L GDV +E A AS ITPVPGGVGPMT+ ML NT+ SAKR Sbjct: 125 LNVGKMLLG--EDTFLPCTPHGIVELLKKTNIDLSGKEVVVVGRSNIVGKPVGQLLLNENATVTYCHSRTENITEHTKKADILVVAVGRANFISADQIKEGAVVIDVGVNRLE---------NGKLCGDVEFEGAKEKASFITPVPGGVGPMTITMLAHNTVKSAKR 280
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ANAMM (Bifunctional protein folD OS=Anaplasma marginale (strain St. Maries) GN=folD PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.403e-33 Identity = 76/161 (47.20%), Postives = 104/161 (64.60%), Query Frame = -1 Query: 169 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTL 651 N G LA G+ IPCTP+GCI L+ ++ G NAVV+GRSNIVG P +LLL + TV+++H+ ++N E+ ADI++AA G A +R SW+KPGA+V+DVG V+ S R +GDV +E + +TPVPGGVGPMT+A LL NT+ Sbjct: 126 NAGKLAT-GQLDCMIPCTPQGCIHLIKTVKQDLAGSNAVVVGRSNIVGKPVALLLLYENCTVTVLHSASRNLEEHCLRADIIVAAVGKARFIRASWIKPGAIVVDVGINLVEESGKK------RFVGDVEFEGLQDVPCSVTPVPGGVGPMTIAFLLVNTV 279
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ANADF (Bifunctional protein folD OS=Anaeromyxobacter sp. (strain Fw109-5) GN=folD PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.403e-33 Identity = 77/150 (51.33%), Postives = 99/150 (66.00%), Query Frame = -1 Query: 157 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 606 PCTP G + LL + V+ GK A+V+GRSNIVG P + +L HATV+I H+ T++ + ADIV+AA G A L+RG W++ GAVV+DVG +D RL+GDV Y A R AS ITPVPGGVGPMT AMLL NT++ A+ Sbjct: 137 PCTPAGVMRLLDEARVDPKGKRAIVVGRSNIVGKPMAAMLLERHATVTIAHSRTQDLAGEVARADIVVAAIGKAELIRGEWIREGAVVIDVGMNRLDDG---------RLVGDVEYAAAARRASAITPVPGGVGPMTRAMLLVNTIELAR 277
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD2_ROSDO (Bifunctional protein folD 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=folD2 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.403e-33 Identity = 79/170 (46.47%), Postives = 102/170 (60.00%), Query Frame = -1 Query: 145 NIGNLAMRGR-EPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 651 +I N+ + G + +PCTP GC+ +L + G NAVVIGRSNIVG P + LL TV+I H+ TK+ + ADIV+AA G +V G W+KPGA V+DVG +D E RL+GD Y+ A ITPVPGGVGPMT+A LL+NT+ S RA G Sbjct: 124 HISNVGLLGTGQKSMVPCTPLGCLMMLREHHGSLSGMNAVVIGRSNIVGKPMAQLLLNDSCTVTIAHSRTKDLPDVVRGADIVVAAVGRPEMVPGDWIKPGATVIDVGINRID--APEKGEGKTRLVGDCHYDSCAETAGAITPVPGGVGPMTIACLLANTVTSCCRANG 291
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_PSEU5 (Bifunctional protein folD OS=Pseudomonas stutzeri (strain A1501) GN=folD PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.833e-33 Identity = 79/168 (47.02%), Postives = 106/168 (63.10%), Query Frame = -1 Query: 148 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 651 N+G LA R PL PCTPKG + LL +GV++ G +AVV+G SNIVG P +L L T ++ H T+N + AD+V+ A G+ LV+G W+KPGA+V+DVG ++ D RL+GDV +E A A+ ITPVPGGVGPMT A LL NTL +A+ + Sbjct: 127 NVGRLAQR--MPLLRPCTPKGIMTLLESTGVDLHGLDAVVVGASNIVGRPMALELLLAGCTTTVTHRFTRNLAEHVRRADLVVVATGITGLVKGEWIKPGAIVIDVG---INRQTDG------RLLGDVEFEPASERAAWITPVPGGVGPMTRACLLENTLYAAEHLH 283
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_JANSC (Bifunctional protein folD OS=Jannaschia sp. (strain CCS1) GN=folD PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.833e-33 Identity = 79/169 (46.75%), Postives = 106/169 (62.72%), Query Frame = -1 Query: 145 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 651 N G L+ G + CTP GC+ LL + GK+AVVIGRSN+ G P + LL + TV+I H+ TK+ + ADI++AA G A +VRG W+KPGA V+DVG V P +L+GDV + EA+ +A ITPVPGGVGPMT+A LL+NT+ + RA+G Sbjct: 136 NAGLLSSGGEA--LVSCTPLGCLMLLRAEFDSLSGKDAVVIGRSNLFGKPMAQLLLGDNCTVTIAHSRTKDLADVCRRADILVAAVGRAEMVRGDWIKPGATVIDVGISRVP---HPDKPGKTKLIGDVHFAEAVDVAGAITPVPGGVGPMTIACLLANTVTACCRAHG 299
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_GRAFK (Bifunctional protein folD OS=Gramella forsetii (strain KT0803) GN=folD PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.833e-33 Identity = 81/170 (47.65%), Postives = 108/170 (63.53%), Query Frame = -1 Query: 154 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 651 N G +A+ FIP TP G +ELL R + GK+ VVIGRS IVG P S+L+ R ++TV++ H TKN Q+TS+ADI+I A G+ + ++G +K AV++DVG V D E GY + GDV +E + AS ITPVPGGVGPMTV+MLL NTL + +R Sbjct: 125 NFGKMALDMTS--FIPATPFGILELLERYDIPTKGKHTVVIGRSYIVGRPMSILMGRSGFPGNSTVTLTHEFTKNITQVTSQADIIIIAVGIPDFLKGEMIKDDAVIIDVGITRVP---DDHAERGYVIKGDVDFENVSKRASFITPVPGGVGPMTVSMLLKNTLLARER 289
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ACIAC (Bifunctional protein folD OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=folD PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.833e-33 Identity = 76/158 (48.10%), Postives = 104/158 (65.82%), Query Frame = -1 Query: 145 PLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 618 P F PCTP GC+++L G ++ GK+AVVIGRSNIVG P +L+L ATV++ H+ T + + T +AD+++AA G N++ +KPGAVV+DVG D RL GDV ++ +A ITPVPGGVGPMT+ MLL NTL++A+RA G Sbjct: 135 PGFWPCTPYGCMKMLEHIGYDLRGKHAVVIGRSNIVGKPMALMLLAKDATVTVCHSRTADLKAQTLQADVIVAAVGRRNVLTADMVKPGAVVIDVGMNRNDEG---------RLCGDVDFDGVREVAGHITPVPGGVGPMTITMLLVNTLEAAERAAG 283 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |