CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_STRA5 (Bifunctional protein folD OS=Streptococcus agalactiae serotype V GN=folD PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.188e-32 Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = -1 Query: 151 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 654 +N G+L GR P+ +PCTP G +E+ V++ GK+AV+IGRSNIVG P + LL +ATV++ H+ T+N ++T EADI+I A G + V ++K GAVV+DVG + + +L+GDV +E+ +AS+ITPVPGGVGPMT+ MLL T +A R+ Sbjct: 125 MNTGHL-WSGR-PMMVPCTPAGIMEMFREYHVDLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLSEVTKEADILIVAIGQGHFVTKDFVKEGAVVIDVGM---------NRDENGKLIGDVVFEQVAEVASMITPVPGGVGPMTITMLLEQTYQAALRS 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_STRA3 (Bifunctional protein folD OS=Streptococcus agalactiae serotype III GN=folD PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.188e-32 Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = -1 Query: 151 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 654 +N G+L GR P+ +PCTP G +E+ V++ GK+AV+IGRSNIVG P + LL +ATV++ H+ T+N ++T EADI+I A G + V ++K GAVV+DVG + + +L+GDV +E+ +AS+ITPVPGGVGPMT+ MLL T +A R+ Sbjct: 125 MNTGHL-WSGR-PMMVPCTPAGIMEMFREYHVDLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLSEVTKEADILIVAIGQGHFVTKDFVKEGAVVIDVGM---------NRDENGKLIGDVVFEQVAEVASMITPVPGGVGPMTITMLLEQTYQAALRS 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_STRA1 (Bifunctional protein folD OS=Streptococcus agalactiae serotype Ia GN=folD PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.188e-32 Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = -1 Query: 151 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 654 +N G+L GR P+ +PCTP G +E+ V++ GK+AV+IGRSNIVG P + LL +ATV++ H+ T+N ++T EADI+I A G + V ++K GAVV+DVG + + +L+GDV +E+ +AS+ITPVPGGVGPMT+ MLL T +A R+ Sbjct: 125 MNTGHL-WSGR-PMMVPCTPAGIMEMFREYHVDLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLSEVTKEADILIVAIGQGHFVTKDFVKEGAVVIDVGM---------NRDENGKLIGDVVFEQVAEVASMITPVPGGVGPMTITMLLEQTYQAALRS 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_OLICO (Bifunctional protein folD OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=folD PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.188e-32 Identity = 78/165 (47.27%), Postives = 101/165 (61.21%), Query Frame = -1 Query: 160 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 654 +N G LA P PCTP GCI L + G NA+V+GRSN+VG P LL +ATV+I H+ T+N + +AD+V AA G +V+G W+KPGA V+DVG ++ P RL+GDV Y EAM +A +TPVPGGVG MTVA LL NT+ +A Sbjct: 126 VNAGRLA--SGLPALTPCTPLGCIILAKTVHASLEGMNAIVLGRSNLVGRPLVQLLLNENATVTIAHSRTRNLPALCRQADLVFAAVGRPEMVKGDWIKPGATVIDVG-----INRLPGEGGKSRLVGDVAYAEAMEVAGAVTPVPGGVGQMTVACLLVNTVRAA 283
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_MICAN (Bifunctional protein folD OS=Microcystis aeruginosa (strain NIES-843) GN=folD PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.188e-32 Identity = 83/167 (49.70%), Postives = 107/167 (64.07%), Query Frame = -1 Query: 154 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 654 LN+G L +RG E CTP G + LL + I GK+AVV+GRS +VG P +L+L +ATV+I H+ T+N +IT ADI++ A G ANL+ +KPGAVV+DVG V RL+GDV Y + +AS +TPVPGGVGPMTVAMLL NTL S +R Sbjct: 129 LNLGGL-VRG-EDCIRSCTPAGVMALLKEYNIPIAGKHAVVVGRSILVGKPLALMLLEENATVTIAHSRTENLAEITRSADILVPAVGKANLITKDMVKPGAVVVDVGINRV----------ADRLVGDVDYAGVLEVASYLTPVPGGVGPMTVAMLLKNTLLSYER 283
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BURCJ (Bifunctional protein folD OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=folD PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.188e-32 Identity = 76/162 (46.91%), Postives = 102/162 (62.96%), Query Frame = -1 Query: 151 AMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 636 A+ +PLF PCTP G +++ G+ + G NAVVIGRSNIVG P +++L ATV+I H+ T++ T EADIV+AA G N++ +KPGA V+DVG D +L GDV + +A ITPVPGGVGPMT+ MLL NT++SA+RA Sbjct: 129 ALMTGKPLFRPCTPYGVMKMFEAHGIALQGANAVVIGRSNIVGKPMAMMLLDAGATVTICHSKTRDLAAHTREADIVVAAVGKRNILTADMVKPGATVIDVGMNRDDAG---------KLCGDVDFAGVKEVAGYITPVPGGVGPMTITMLLINTIESAERA 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BURCH (Bifunctional protein folD OS=Burkholderia cenocepacia (strain HI2424) GN=folD PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.188e-32 Identity = 76/162 (46.91%), Postives = 102/162 (62.96%), Query Frame = -1 Query: 151 AMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 636 A+ +PLF PCTP G +++ G+ + G NAVVIGRSNIVG P +++L ATV+I H+ T++ T EADIV+AA G N++ +KPGA V+DVG D +L GDV + +A ITPVPGGVGPMT+ MLL NT++SA+RA Sbjct: 129 ALMTGKPLFRPCTPYGVMKMFEAHGIALQGANAVVIGRSNIVGKPMAMMLLDAGATVTICHSKTRDLAAHTREADIVVAAVGKRNILTADMVKPGATVIDVGMNRDDAG---------KLCGDVDFAGVKEVAGYITPVPGGVGPMTITMLLINTIESAERA 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BURCC (Bifunctional protein folD OS=Burkholderia cenocepacia (strain MC0-3) GN=folD PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.188e-32 Identity = 76/162 (46.91%), Postives = 102/162 (62.96%), Query Frame = -1 Query: 151 AMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 636 A+ +PLF PCTP G +++ G+ + G NAVVIGRSNIVG P +++L ATV+I H+ T++ T EADIV+AA G N++ +KPGA V+DVG D +L GDV + +A ITPVPGGVGPMT+ MLL NT++SA+RA Sbjct: 129 ALMTGKPLFRPCTPYGVMKMFEAHGIALQGANAVVIGRSNIVGKPMAMMLLDAGATVTICHSKTRDLAAHTREADIVVAAVGKRNILTADMVKPGATVIDVGMNRDDAG---------KLCGDVDFAGVKEVAGYITPVPGGVGPMTITMLLINTIESAERA 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BRASB (Bifunctional protein folD OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=folD PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.188e-32 Identity = 78/164 (47.56%), Postives = 102/164 (62.20%), Query Frame = -1 Query: 160 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 651 N G L+ G +P PCTP GCI L + G NA+VIGRSN+VG P LL +ATV+I H+ +++ +T+ AD+V AA G +V+ W+KPGA V+DVG ++ P+ E RL+GDV Y E +A ITPVPGGVG MTVA LL NTL +A Sbjct: 127 NAGRLS--GGQPALAPCTPLGCIILSKTVHPSLEGLNAIVIGRSNLVGRPLVQLLLNENATVTIAHSRSRDLAALTARADLVYAAVGRPEMVKRDWIKPGATVIDVG-----INRIPTAEGKTRLVGDVAYAEVAEVAGAITPVPGGVGQMTVACLLVNTLRAA 283
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD2_BORPE (Bifunctional protein folD 2 OS=Bordetella pertussis GN=folD2 PE=3 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.188e-32 Identity = 80/163 (49.08%), Postives = 109/163 (66.87%), Query Frame = -1 Query: 151 LAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 639 L M G+ P F PCTP G ++LL GV + G AV++G SNIVG P ++LL ATV+I ++ T++ AD++I AAG A +V GS +KPGAVV+DVG ++ S D RL GDV Y A ++A ITPVPGGVGPMT+AMLL+NT+++A+R+ Sbjct: 129 LLMTGK-PQFQPCTPYGVMKLLESEGVSLRGAEAVIVGASNIVGKPMAMLLLAAGATVTICNSKTRDLAGQARRADVLIVAAGRAGIVDGSMIKPGAVVIDVG---INRSPDG------RLCGDVDYGSAAKVAGAITPVPGGVGPMTIAMLLANTVEAAERS 281 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |