CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_PSEE4 (Bifunctional protein folD OS=Pseudomonas entomophila (strain L48) GN=folD PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.895e-32 Identity = 78/168 (46.43%), Postives = 103/168 (61.31%), Query Frame = -1 Query: 148 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 651 NIG LA R PL PCTPKG + LL +G ++ G NAV++G SNIVG P ++ L TV++ H TK+ AD+V+ AAG LV+G W+K GA+V+DVG + + +L+GDV YE A+ A ITPVPGGVGPMT A LL NTL +A+ + Sbjct: 127 NIGRLAQR--IPLLRPCTPKGIMTLLESTGQDLYGMNAVIVGASNIVGRPMAMELLLAGCTVTVCHRFTKDLAGHVGRADLVVVAAGKPGLVKGEWVKEGAIVIDVGI---------NRQEDGKLVGDVVYETALPRAGWITPVPGGVGPMTRACLLENTLYAAEELH 283
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_MAGSA (Bifunctional protein folD OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=folD PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.895e-32 Identity = 75/169 (44.38%), Postives = 108/169 (63.91%), Query Frame = -1 Query: 148 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 654 +N+G LA G +PCTP G + LL + ++ G +AVVIGRSNIVG P + LL + TV++ H+ TK+ + ADIVIAA G +++G W+KPGA V+DVG +++ + +L+GDV + A+++A ITPVPGGVGPMT+A LL NTL + R + Sbjct: 127 VNVGRLAAGG--DALVPCTPLGSLLLLKDTLGKLGGLDAVVIGRSNIVGKPMAQLLIKESCTVTVAHSQTKDLPGVVRRADIVIAAVGRPEMIKGDWIKPGATVIDVGINRIELP-----DGTKKLVGDVDFASAVKVAGAITPVPGGVGPMTIACLLRNTLVACARLH 288
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_CAMJD (Bifunctional protein folD OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=folD PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.895e-32 Identity = 75/166 (45.18%), Postives = 107/166 (64.46%), Query Frame = -1 Query: 157 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 654 +N+G L + G E F+PCTP G ++LL +++ GK+AV+IG SNIVG P + +L ATVS+ H TK+ T +AD++I AAG NL+R +K G +V+DVG ++ +++GDV +EE + +S ITPVP GVGPMT+AMLL NT+ SAK Sbjct: 123 INVGYLNL-GLESGFLPCTPLGVMKLLKAYEIDLKGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRLESG---------KIVGDVDFEEVSKKSSYITPVPCGVGPMTIAMLLENTVKSAK 278
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BART1 (Bifunctional protein folD OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=folD PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.895e-32 Identity = 74/173 (42.77%), Postives = 110/173 (63.58%), Query Frame = -1 Query: 148 LNIGNLAMRGREPLFIPCTPKGCIELLIRS-GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGY---RLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 654 +N+G LA E IPCTP G + ++ + G ++ G +AVV+GRSNIVG P + LL +ATV+I H+ T++ + + ADI++AA G +++ W+K A+V+DVG ++ P+ E G L+GDV +E A+ ITPVPGGVGPMT+AML+ NTL +A R + Sbjct: 125 VNVGKLAANALEDAIIPCTPAGAMMMIEQHCGRDLSGLDAVVVGRSNIVGKPMAALLTAANATVTIAHSRTRDLDDVCRSADILVAAVGRPQMIKKDWIKKDAIVIDVG-----INRIPAPEKGVGKTHLIGDVDFENVKEKAAAITPVPGGVGPMTIAMLMVNTLKAAARLH 292
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BACC2 (Bifunctional protein folD OS=Bacillus cereus (strain G9842) GN=folD PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.895e-32 Identity = 72/168 (42.86%), Postives = 109/168 (64.88%), Query Frame = -1 Query: 151 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 654 +++G + M G++ F+PCTP G +EL+ + ++I GK+ VVIGRSNIVG P L +ATV+ H+ T+N ++++ ADI+I A G ++ ++K GAVV+DVG ++ +L GDV ++ + +A ITPVP GVGPMT+ MLL NT++SAKRA Sbjct: 125 ISVGRM-MTGQDT-FLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELSKLADILIVAVGRPKMITADYIKEGAVVIDVGVNRLETG---------KLCGDVDFDNVLNVAGYITPVPKGVGPMTITMLLHNTVESAKRA 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD2_PSEPK (Bifunctional protein folD 2 OS=Pseudomonas putida (strain KT2440) GN=folD2 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.895e-32 Identity = 78/168 (46.43%), Postives = 103/168 (61.31%), Query Frame = -1 Query: 148 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 651 NIG LA R PL PCTPKG + LL +G ++ G NAV++G SNIVG P ++ L TV++ H TK+ AD+V+ AAG LV+G W+K GA+V+DVG + + +L+GDV YE A+ A ITPVPGGVGPMT A LL NTL +A+ + Sbjct: 127 NIGRLAQR--IPLLRPCTPKGIMTLLESTGQDLYGMNAVIVGASNIVGRPMAMELLLAGCTVTVCHRFTKDLAGHVGRADLVVVAAGKPGLVKGEWVKEGAIVIDVGI---------NRQEDGKLVGDVVYETALPRAGWITPVPGGVGPMTRACLLENTLYAAEELH 283
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD1_PSEPG (Bifunctional protein folD 1 OS=Pseudomonas putida (strain GB-1) GN=folD1 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.895e-32 Identity = 78/168 (46.43%), Postives = 103/168 (61.31%), Query Frame = -1 Query: 148 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 651 NIG LA R PL PCTPKG + LL +G ++ G NAV++G SNIVG P ++ L TV++ H TK+ AD+V+ AAG LV+G W+K GA+V+DVG + + +L+GDV YE A+ A ITPVPGGVGPMT A LL NTL +A+ + Sbjct: 133 NIGRLAQR--IPLLRPCTPKGIMTLLESTGQDLYGMNAVIVGASNIVGRPMAMELLLAGCTVTVCHRFTKDLAGHVGRADLVVVAAGKPGLVKGEWVKEGAIVIDVGI---------NRQEDGKLVGDVVYETALPRAGWITPVPGGVGPMTRACLLENTLYAAEELH 289
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_WOLPP (Bifunctional protein folD OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=folD PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.699e-32 Identity = 73/164 (44.51%), Postives = 104/164 (63.41%), Query Frame = -1 Query: 160 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 651 N+G L ++G + IPCTPKG + L+ + GKNAV+IGRSNIVG P LL + + TV+I+H+ +++ S+ADIV+AA G N V+ W+K GA+V+DVG +++ +L+GDV +E ITPVPGGVGPMT+A L+ NTL +A Sbjct: 126 NVGRL-VKGEKNCLIPCTPKGSLHLIKSVENNLSGKNAVIIGRSNIVGKPMFHLLLQENCTVTILHSQSRDLADYCSKADIVVAAVGKPNFVQPDWIKKGAIVIDVGINSINIGNQS------KLVGDVDFEGVKEKVKAITPVPGGVGPMTIAFLMINTLVAA 282
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_VIBPA (Bifunctional protein folD OS=Vibrio parahaemolyticus GN=folD PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.699e-32 Identity = 77/161 (47.83%), Postives = 98/161 (60.87%), Query Frame = -1 Query: 169 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTL 651 N+G LA R P CTPKG I LL R +E+ GK+AVV+G SNIVG P +L L T + H TK+ E +AD+V+ A G N + G W+K GAVV+DVG +D +L+GDV Y++A AS ITPVPGGVGPMTVA L+ NT+ Sbjct: 127 NVGRLAQR--IPKLRSCTPKGIITLLDRYNIELRGKHAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKDLESHVRQADVVVVAVGKPNFIPGEWIKKGAVVVDVGINRLDSG---------KLVGDVEYDKARESASFITPVPGGVGPMTVASLIENTM 276
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_THET8 (Bifunctional protein folD OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=folD PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.699e-32 Identity = 75/165 (45.45%), Postives = 105/165 (63.64%), Query Frame = -1 Query: 160 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 654 LN+G L G+ PCTP G + LL GV++ GK VV+GRSNIVG P + LL R ATV++ H+ T++ ++T A +++ A G +LVR W++ GA+V+DVG V+ RL+GDV + E +A +TPVPGGVGPMTVAML+ NTL++A Sbjct: 122 LNVGRLWSGGKG--LFPCTPLGVVRLLKHYGVDLRGKEVVVVGRSNIVGKPLAGLLLREDATVTLAHSKTQDLPEVTRRAQVLVVAVGRPHLVRKEWVREGAIVVDVGVNRVE----------GRLLGDV-HPEVAEVAFALTPVPGGVGPMTVAMLMGNTLEAA 273 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |