CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_LAWIP (Bifunctional protein folD OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=folD PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.038e-36 Identity = 84/169 (49.70%), Postives = 108/169 (63.91%), Query Frame = -1 Query: 160 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 654 +N+G L + G F+PCTP G ELLIRS VE +G VVIGRSNIVG P S++L + ATV++VH +KN + +ADIVIAA GV N V+ W+KPGA V+DVG + + D L GDV + ++A ITPVPGGVGPMT+AML+ NT+ SA Sbjct: 126 MNLGRLVIGGNAITFLPCTPAGIQELLIRSSVETLGAEVVVIGRSNIVGRPISIMLTQKGVGGDATVTLVHTKSKNIVRHCQQADIVIAAVGVPNFVKAEWIKPGATVIDVGVNRIGFNEDTGKPI---LSGDVDFVNVSQVAGKITPVPGGVGPMTIAMLMRNTVRSA 291
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_PELPD (Bifunctional protein folD OS=Pelobacter propionicus (strain DSM 2379) GN=folD PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.356e-36 Identity = 79/166 (47.59%), Postives = 110/166 (66.27%), Query Frame = -1 Query: 154 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 651 N+G L++ +P+F PCTP G + +L +GVE+ GK VV+GRSNIVG P +++ HATV++ H+ T++ + AD+VIAA G +++G W+K GAVV+DVG V +L+GDV + A + AS ITPVPGGVGPMT+ MLL NTL+SAKR Sbjct: 125 NVGRLSVG--KPVFQPCTPYGVMVMLREAGVELKGKEVVVVGRSNIVGKPVAMMCLAEHATVTLCHSRTRDLPDVVRRADVVIAAVGRPEMIKGDWIKEGAVVIDVGINRVGEK---------KLVGDVEFAGASQRASAITPVPGGVGPMTITMLLQNTLESAKR 279
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD2_GEOMG (Bifunctional protein folD 2 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=folD2 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.356e-36 Identity = 80/166 (48.19%), Postives = 110/166 (66.27%), Query Frame = -1 Query: 154 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 651 N+G L + +P F PCTP G + +L +GV++ GK VV+GRSNIVG P +L+ + HATV+I H+ T++ EAD+VIAA GV +++G W+K GAVV+DVG V +L+GDV + A + AS ITPVPGGVGPMT+ MLL NTL++AK+ Sbjct: 125 NVGRLMVG--KPTFQPCTPYGVMVMLREAGVDLAGKEVVVVGRSNIVGKPVALMCLQQHATVTICHSKTRDLPSKVKEADVVIAAVGVPEMIKGEWIKEGAVVIDVGVNRVGEK---------KLVGDVEFAAASQRASAITPVPGGVGPMTITMLLYNTLEAAKK 279
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_PELLD (Bifunctional protein folD OS=Pelodictyon luteolum (strain DSM 273) GN=folD PE=3 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.771e-36 Identity = 85/173 (49.13%), Postives = 112/173 (64.74%), Query Frame = -1 Query: 145 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLL----LQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 651 N+G L M + F+ CTP G +EL+ R G+E GK+ VVIGRSNIVG P + L L+ + TV++ H+ TK+ T +ADI+IAA G A V +K GAVV+DVG ++ DP+ + G RL+GDV YE A+ +TPVPGGVGPMT+AMLL NTL S +RA G Sbjct: 125 NLGRLVMGHLDKCFVSCTPYGILELIGRYGIETSGKHCVVIGRSNIVGKPMANLMMQKLKESNCTVTVCHSATKDIASYTRQADILIAAIGRAKFVTADMVKQGAVVIDVGINRIE---DPTTKSGTRLVGDVDYEGVSAKAAAMTPVPGGVGPMTIAMLLKNTLHSFERANG 294
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_SYNFM (Bifunctional protein folD OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=folD PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.021e-36 Identity = 80/171 (46.78%), Postives = 115/171 (67.25%), Query Frame = -1 Query: 157 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLM-GDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 654 +N+G L + EP ++PCTP G ELL+RSG ++ G ++GRSNIVG P +++L + +AT+++ H TK+ T ADI+I AAGVA V+G+ +KPGAVV+DVG V + D G R++ GDV ++EA+ +AS ITPVPGGVGPMT+ ML+ NT+ + K Sbjct: 126 VNVGKLMIG--EPDYLPCTPAGIQELLVRSGTQVSGAEVTIVGRSNIVGKPIAMMLVQKANGANATITVCHTRTKDVASHTRRADILIVAAGVAEYVKGNMIKPGAVVIDVGVNEVGKTAD-----GKRILKGDVAFDEAVEVASAITPVPGGVGPMTITMLMKNTVRACK 289
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_NATTJ (Bifunctional protein folD OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=folD PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.021e-36 Identity = 82/167 (49.10%), Postives = 112/167 (67.07%), Query Frame = -1 Query: 154 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 654 +N+GNL + + F PCTP G ++LL ++ GK+AVV+GRSNIVG P SLLL +ATVSI H+ TK+ ++T AD++I A G +V G +KPGAVV+DVG VD +L+GDV +E A +A ITPVPGGVGPMT+ MLL+NT+++A+R Sbjct: 125 VNVGNLTIGQKR--FTPCTPAGIMKLLDSIDYDLNGKHAVVLGRSNIVGKPISLLLLERNATVSICHSRTKDLTEMTKSADLLIVAVGRPEIVTGKMIKPGAVVIDVGVNKVD----------DKLIGDVEFESAKEVAGWITPVPGGVGPMTITMLLNNTIEAARR 279
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD1_RHILO (Bifunctional protein folD 1 OS=Rhizobium loti GN=folD1 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.021e-36 Identity = 84/174 (48.28%), Postives = 113/174 (64.94%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG---YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N+G L + F+PCTP G + L+ R G ++ G NAVV+GRSNIVG P + LL + TV+I H+ TK+ + ADI++AA G +++G W+KPGA V+DVG ++ P+ E G RL+GDV Y EA R A ITPVPGGVGPMT+AML++NTL SA A G Sbjct: 125 INVGKLGTGELDTAFVPCTPAGSMLLIQRVRGKDLSGLNAVVVGRSNIVGKPMANLLLAANCTVTIAHSRTKDLPALARTADILVAAVGRPEMIKGDWVKPGATVIDVG-----INRIPAPEKGEGKSRLVGDVAYAEAARQAGAITPVPGGVGPMTIAMLMANTLASAYLAAG 293
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BACP2 (Bifunctional protein folD OS=Bacillus pumilus (strain SAFR-032) GN=folD PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.945e-36 Identity = 81/167 (48.50%), Postives = 107/167 (64.07%), Query Frame = -1 Query: 154 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 654 LNIG + + E F+PCTP G +ELL ++GV + GK VV+GRSNIVG P LL +ATV+ H+ T N + T +ADI++ A G AN ++ +K GA+V+DVG +D +L+GDV +EEA AS ITPVPGGVGPMT+ ML NT+ SAKR Sbjct: 125 LNIGKMLLG--EDTFLPCTPAGIVELLNKTGVNLSGKEVVVVGRSNIVGKPVGQLLLNENATVTYCHSRTANISEHTLKADILVVAVGRANFIKADQIKEGAIVIDVGVNRLDTG---------KLVGDVDFEEAKEKASYITPVPGGVGPMTITMLAHNTVKSAKR 280
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_NOVAD (Bifunctional protein folD OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=folD PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.153e-36 Identity = 85/171 (49.71%), Postives = 111/171 (64.91%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG-YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N G LA+ +P F+PCTP GC+ LL ++ G +AVVIGRSNIVG P + LL TV++ H+ TKN ++ ADIV+AA G +V+G W+KPGA V+DVG ++ P E G RL+GDV Y A +AS ITPVPGGVGPMT+A+LL N L +A R G Sbjct: 126 INAGRLAVG--QPGFVPCTPLGCLMLLKDRLGDLSGLDAVVIGRSNIVGKPMAQLLIAESCTVTVAHSRTKNLPEVVRRADIVVAAVGRPEMVKGDWIKPGATVIDVG-----INRVPGKEEGKTRLVGDVDYASAAEVASAITPVPGGVGPMTIAVLLRNALVAAYRNAG 289
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_GEOSF (Bifunctional protein folD OS=Geobacter sp. (strain FRC-32) GN=folD PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.153e-36 Identity = 80/166 (48.19%), Postives = 110/166 (66.27%), Query Frame = -1 Query: 154 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 651 N+G L + +PLF PCTP G + +L +GV++ GK VV+GRSNIVG P + + + +ATV++ H+ T++ + AD+VIAA G +++G+W+K GAVV+DVG V +L+GDV YE A AS ITPVPGGVGPMT+ MLL NTL+SAKR Sbjct: 125 NVGRLVIG--KPLFQPCTPYGVMVMLKETGVDLAGKEVVVVGRSNIVGKPVAFMCLQQNATVTLCHSKTRDLAAKVAMADVVIAAVGQPEMIKGAWIKKGAVVIDVGVNRVGEK---------KLVGDVEYEAASARASAITPVPGGVGPMTITMLLYNTLESAKR 279 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |