CN188900

Overview
NameCN188900
Unique NameCN188900
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ECOLI (Bifunctional protein folD OS=Escherichia coli (strain K12) GN=folD PE=1 SV=4)

HSP 1 Score: 134.42 bits (337), Expect = 4.991e-31
Identity = 72/163 (44.17%), Postives = 96/163 (58.90%), Query Frame = -1 
Query:  163 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 651
            N+G L  R   P   PCTP+G + LL R  ++  G NAVVIG SNIVG P S+ L     T ++ H  TKN       AD++I A G    + G W+K GA+V+DVG   ++           +++GDV +E+A + AS ITPVPGGVGPMTVA L+ NTL +
Sbjct:  127 NVGRLCQRA--PRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLE---------NGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQA 278
[Close]
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ECOLC (Bifunctional protein folD OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=folD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.991e-31
Identity = 72/163 (44.17%), Postives = 96/163 (58.90%), Query Frame = -1 
Query:  163 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 651
            N+G L  R   P   PCTP+G + LL R  ++  G NAVVIG SNIVG P S+ L     T ++ H  TKN       AD++I A G    + G W+K GA+V+DVG   ++           +++GDV +E+A + AS ITPVPGGVGPMTVA L+ NTL +
Sbjct:  127 NVGRLCQRA--PRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLE---------NGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQA 278
[Close]
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ECOL6 (Bifunctional protein folD OS=Escherichia coli O6 GN=folD PE=3 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 4.991e-31
Identity = 72/163 (44.17%), Postives = 96/163 (58.90%), Query Frame = -1 
Query:  163 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 651
            N+G L  R   P   PCTP+G + LL R  ++  G NAVVIG SNIVG P S+ L     T ++ H  TKN       AD++I A G    + G W+K GA+V+DVG   ++           +++GDV +E+A + AS ITPVPGGVGPMTVA L+ NTL +
Sbjct:  127 NVGRLCQRA--PRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLE---------NGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQA 278
[Close]
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ECOL5 (Bifunctional protein folD OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=folD PE=3 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 4.991e-31
Identity = 72/163 (44.17%), Postives = 96/163 (58.90%), Query Frame = -1 
Query:  163 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 651
            N+G L  R   P   PCTP+G + LL R  ++  G NAVVIG SNIVG P S+ L     T ++ H  TKN       AD++I A G    + G W+K GA+V+DVG   ++           +++GDV +E+A + AS ITPVPGGVGPMTVA L+ NTL +
Sbjct:  127 NVGRLCQRA--PRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLE---------NGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQA 278
[Close]
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ECOK1 (Bifunctional protein folD OS=Escherichia coli O1:K1 / APEC GN=folD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.991e-31
Identity = 72/163 (44.17%), Postives = 96/163 (58.90%), Query Frame = -1 
Query:  163 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 651
            N+G L  R   P   PCTP+G + LL R  ++  G NAVVIG SNIVG P S+ L     T ++ H  TKN       AD++I A G    + G W+K GA+V+DVG   ++           +++GDV +E+A + AS ITPVPGGVGPMTVA L+ NTL +
Sbjct:  127 NVGRLCQRA--PRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLE---------NGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQA 278
[Close]
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ECOHS (Bifunctional protein folD OS=Escherichia coli O9:H4 (strain HS) GN=folD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.991e-31
Identity = 72/163 (44.17%), Postives = 96/163 (58.90%), Query Frame = -1 
Query:  163 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 651
            N+G L  R   P   PCTP+G + LL R  ++  G NAVVIG SNIVG P S+ L     T ++ H  TKN       AD++I A G    + G W+K GA+V+DVG   ++           +++GDV +E+A + AS ITPVPGGVGPMTVA L+ NTL +
Sbjct:  127 NVGRLCQRA--PRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLE---------NGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQA 278
[Close]
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ECODH (Bifunctional protein folD OS=Escherichia coli (strain K12 / DH10B) GN=folD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.991e-31
Identity = 72/163 (44.17%), Postives = 96/163 (58.90%), Query Frame = -1 
Query:  163 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 651
            N+G L  R   P   PCTP+G + LL R  ++  G NAVVIG SNIVG P S+ L     T ++ H  TKN       AD++I A G    + G W+K GA+V+DVG   ++           +++GDV +E+A + AS ITPVPGGVGPMTVA L+ NTL +
Sbjct:  127 NVGRLCQRA--PRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLE---------NGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQA 278
[Close]
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ECOBW (Bifunctional protein folD OS=Escherichia coli (strain K12 / BW2952) GN=folD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.991e-31
Identity = 72/163 (44.17%), Postives = 96/163 (58.90%), Query Frame = -1 
Query:  163 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 651
            N+G L  R   P   PCTP+G + LL R  ++  G NAVVIG SNIVG P S+ L     T ++ H  TKN       AD++I A G    + G W+K GA+V+DVG   ++           +++GDV +E+A + AS ITPVPGGVGPMTVA L+ NTL +
Sbjct:  127 NVGRLCQRA--PRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLE---------NGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQA 278
[Close]
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ECO8A (Bifunctional protein folD OS=Escherichia coli O8 (strain IAI1) GN=folD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.991e-31
Identity = 72/163 (44.17%), Postives = 96/163 (58.90%), Query Frame = -1 
Query:  163 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 651
            N+G L  R   P   PCTP+G + LL R  ++  G NAVVIG SNIVG P S+ L     T ++ H  TKN       AD++I A G    + G W+K GA+V+DVG   ++           +++GDV +E+A + AS ITPVPGGVGPMTVA L+ NTL +
Sbjct:  127 NVGRLCQRA--PRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLE---------NGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQA 278
[Close]
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ECO81 (Bifunctional protein folD OS=Escherichia coli O81 (strain ED1a) GN=folD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.991e-31
Identity = 72/163 (44.17%), Postives = 96/163 (58.90%), Query Frame = -1 
Query:  163 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 651
            N+G L  R   P   PCTP+G + LL R  ++  G NAVVIG SNIVG P S+ L     T ++ H  TKN       AD++I A G    + G W+K GA+V+DVG   ++           +++GDV +E+A + AS ITPVPGGVGPMTVA L+ NTL +
Sbjct:  127 NVGRLCQRA--PRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLE---------NGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQA 278
The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_ECOLI4.991e-3144.17Bifunctional protein folD OS=Escherichia coli (str... [more]
FOLD_ECOLC4.991e-3144.17Bifunctional protein folD OS=Escherichia coli (str... [more]
FOLD_ECOL64.991e-3144.17Bifunctional protein folD OS=Escherichia coli O6 G... [more]
FOLD_ECOL54.991e-3144.17Bifunctional protein folD OS=Escherichia coli O6:K... [more]
FOLD_ECOK14.991e-3144.17Bifunctional protein folD OS=Escherichia coli O1:K... [more]
FOLD_ECOHS4.991e-3144.17Bifunctional protein folD OS=Escherichia coli O9:H... [more]
FOLD_ECODH4.991e-3144.17Bifunctional protein folD OS=Escherichia coli (str... [more]
FOLD_ECOBW4.991e-3144.17Bifunctional protein folD OS=Escherichia coli (str... [more]
FOLD_ECO8A4.991e-3144.17Bifunctional protein folD OS=Escherichia coli O8 (... [more]
FOLD_ECO814.991e-3144.17Bifunctional protein folD OS=Escherichia coli O81 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001A02_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bp
TTTTTTTTTTTTTTTATATAATCTACGTGCAGGTTAATTGATATTAGACT
TGAAAACTATGTTATTTCAATCATTGTGGAAGCAAAAAATAGTACAATTG
AATACAATTTTTTGAGAAGGATAATGCATTGGCAGTCAAGTAAAGCCGTA
TGCCCGTTTGGCAGAGTCGAGAGTGTTGGAGAGAAGCATAGCAACAGTCA
TGGGTCCAACTCCTCCAGGCACAGGGGTAATGACCGACGCTAACCTCATT
GCTTCTTCATAGCAAACATCTCCCATTAGACGATAACCATATTCACAGCT
TGGATCCACGCTTACATCAACAGGACAAGTTCCAACATCAAGAACAACAG
CACCAGGCTTTAGCCAACTCCCACGAACCAGATTAGCTACTCCTGCAGCT
GCGATCACGATATCAGCCTCACTGGTGATCTGCTCGGGGTTTTTTGTTAA
GGCGTGTACAATACTGACGGTTGCATGGTGTCTCTGCAACAATAAAGATG
TGGGCAATCCAACAATATTGCTTCTACCAATCACCACAGCATTCTTGCCC
ATTATCTCGACCCCCGATCTGATCAATAACTCAATGCAACCTTTTGGCGT
ACATGGAATAAACAGTGGTTCCCTTCCTCTCATGGCGAGATTCCCTATAT
TTAG
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