CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_HERA2 (Bifunctional protein folD OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=folD PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.513e-31 Identity = 80/165 (48.48%), Postives = 103/165 (62.42%), Query Frame = -1 Query: 157 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 651 N G LA +G L +P TP G + LL R + + GK+AVV+GRSN+VG P + LL HATV+I H+ T N ++ + DIV AA G A LV G LKPGAVVLD G V +++GDV +E A ++AS ITPVPGG GP+T MLL NTL +A+ Sbjct: 127 NAGRLA-QGLTAL-VPNTPAGGMALLDRYQINLAGKHAVVVGRSNVVGKPLAQLLLARHATVTICHSRTANLAEVIRQGDIVAAAVGKAGLVTGEMLKPGAVVLDFGINEVAEG---------QVVGDVDWESASKVASAITPVPGGTGPVTNMMLLQNTLQAAQ 280
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ERWCT (Bifunctional protein folD OS=Erwinia carotovora subsp. atroseptica GN=folD PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.513e-31 Identity = 72/165 (43.64%), Postives = 96/165 (58.18%), Query Frame = -1 Query: 157 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 651 N+G L R PL CTP+G I LL R ++ G NAVV+G SNIVG P SL L T ++ H TKN AD+++ A G + G W+KPGA+VLDVG ++ +++GD+ +E A AS I+PVPGGVGPMTVA L+ NTL + + Sbjct: 127 NVGRLCQRA--PLLRACTPRGIITLLERYNIDTFGLNAVVVGASNIVGRPMSLELLLAGCTTTVTHRFTKNLRHHIENADLLVVAVGKPGFIPGEWIKPGAIVLDVGINRLESG---------KVVGDIEFETAQERASYISPVPGGVGPMTVATLIQNTLQACE 280
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_DELAS (Bifunctional protein folD OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=folD PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.513e-31 Identity = 74/157 (47.13%), Postives = 103/157 (65.61%), Query Frame = -1 Query: 145 FIPCTPKGCIELLIRSGV-EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 612 F CTP GC+++L G+ ++ GK+AVVIGRSNIVG P +++L +ATV+I H+ T + +T +ADIV+AA G N++ KPGAVV+DVG D +L GDV ++ +A ITPVPGGVGPMT+ MLL NT+++A+RA G Sbjct: 137 FKACTPYGCMKMLESIGMKDLRGKHAVVIGRSNIVGKPMAMMLLAANATVTICHSGTADLAAMTRQADIVVAAVGKRNVLTADMCKPGAVVIDVGMNRNDEG---------KLCGDVDFDGVKEVAGFITPVPGGVGPMTITMLLVNTMEAAERAAG 284
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD1_RUBXD (Bifunctional protein folD 1 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=folD1 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.513e-31 Identity = 72/154 (46.75%), Postives = 100/154 (64.94%), Query Frame = -1 Query: 157 PLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 618 P +PCTP G I+LL RSGV + G+ AVV+GRSN+VG P +LLL R +ATV++ H+ T++ +T A++++ AAG +V ++ GAVV+DVG + L GDV EE A+ +TPVPGGVGPMT AMLL NTL++A+ Sbjct: 134 PSLLPCTPHGVIQLLRRSGVGLEGREAVVVGRSNLVGKPLALLLLRENATVTVCHSRTRDLAGVTRRAEVLVVAAGRRGMVGAEHVREGAVVVDVGIHRAEDG---------GLTGDVRQEEVAARAAALTPVPGGVGPMTRAMLLYNTLEAAR 278
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_VIBSL (Bifunctional protein folD OS=Vibrio splendidus (strain LGP32) GN=folD PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.112e-30 Identity = 75/161 (46.58%), Postives = 98/161 (60.87%), Query Frame = -1 Query: 169 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTL 651 N+G LA R P CTPKG I LL R +++ GK+AVV+G SNIVG P +L L T + H TK+ E +AD+V+ A G N + G+W+K GAVV+DVG ++ +L+GDV Y+ A AS ITPVPGGVGPMTVA L+ NT+ Sbjct: 127 NVGRLAQR--MPKLRSCTPKGIITLLDRYNIDLRGKHAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKDLEGHVRQADVVVVAVGKPNFIPGAWIKKGAVVVDVGINRLESG---------KLVGDVEYDVAKESASFITPVPGGVGPMTVASLIENTM 276
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_SYNY3 (Bifunctional protein folD OS=Synechocystis sp. (strain PCC 6803) GN=folD PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.112e-30 Identity = 75/170 (44.12%), Postives = 109/170 (64.12%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N+G+L +RG E L CTP G + LL +++ GKNAVV+GRS +VG P +L+L + TV+I H+ T+N IT +ADI++AA G V +KPGA+V+DVG +D+ S L+GDV + +AS +TPVPGG+GPMTV +LL+NT+ S ++ G Sbjct: 131 VNLGHL-VRGEEGLR-SCTPAGVMALLAEYNLDLTGKNAVVLGRSILVGKPLALMLLEKNCTVTIAHSRTQNLADITRQADILVAAIGKPEFVTADMVKPGAIVVDVGINRLDLGEGKS-----TLVGDVDFAGVAPVASYLTPVPGGIGPMTVTLLLANTVASYRQRLG 293
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_SOLUE (Bifunctional protein folD OS=Solibacter usitatus (strain Ellin6076) GN=folD PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.112e-30 Identity = 75/166 (45.18%), Postives = 102/166 (61.45%), Query Frame = -1 Query: 145 CTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEY-------------GYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 603 CTP G +ELL R G+ I G+ AVV+GRS+IVG P ++LL HATV+I H+ T + + + EADI++AA G A ++ G ++KPGA V+DVGT V + Y G L+GDV + A TPVPGGVGP+T+AML+ NT+ SA+R G Sbjct: 139 CTPAGIMELLKRGGIPIAGQRAVVVGRSDIVGKPVAMLLLHEHATVTICHSKTPDLKSLCREADILVAAIGRAAMITGEFIKPGATVIDVGTNHVADREKAARIYRNSPEKMANFDKRGNLLIGDVDPVGVVEKAGAYTPVPGGVGPLTIAMLMVNTVASAERRAG 304
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB9 (Bifunctional protein folD OS=Shewanella baltica (strain OS195) GN=folD PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.112e-30 Identity = 76/166 (45.78%), Postives = 100/166 (60.24%), Query Frame = -1 Query: 154 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 651 N+G LA R P+ CTP G + L+ +GV+ G +AVV+G SNIVG P +L L T + H TKN EQ AD+V+ A G + G W+KPGA+V+DVG +D L+GDV Y+ A + AS ITPVPGGVGPMT+A LL NTL +A++ Sbjct: 127 NVGRLAQR--IPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGT---------LVGDVQYDVAAQNASFITPVPGGVGPMTIASLLENTLYAAEQ 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB8 (Bifunctional protein folD OS=Shewanella baltica (strain OS185) GN=folD PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.112e-30 Identity = 76/166 (45.78%), Postives = 100/166 (60.24%), Query Frame = -1 Query: 154 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 651 N+G LA R P+ CTP G + L+ +GV+ G +AVV+G SNIVG P +L L T + H TKN EQ AD+V+ A G + G W+KPGA+V+DVG +D L+GDV Y+ A + AS ITPVPGGVGPMT+A LL NTL +A++ Sbjct: 127 NVGRLAQR--IPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGT---------LVGDVQYDVAAQNASFITPVPGGVGPMTIASLLENTLYAAEQ 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB5 (Bifunctional protein folD OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=folD PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.112e-30 Identity = 76/166 (45.78%), Postives = 100/166 (60.24%), Query Frame = -1 Query: 154 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 651 N+G LA R P+ CTP G + L+ +GV+ G +AVV+G SNIVG P +L L T + H TKN EQ AD+V+ A G + G W+KPGA+V+DVG +D L+GDV Y+ A + AS ITPVPGGVGPMT+A LL NTL +A++ Sbjct: 127 NVGRLAQR--IPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGT---------LVGDVQYDVAAQNASFITPVPGGVGPMTIASLLENTLYAAEQ 281 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |