CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB2 (Bifunctional protein folD OS=Shewanella baltica (strain OS223) GN=folD PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.112e-30 Identity = 76/166 (45.78%), Postives = 100/166 (60.24%), Query Frame = -1 Query: 154 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 651 N+G LA R P+ CTP G + L+ +GV+ G +AVV+G SNIVG P +L L T + H TKN EQ AD+V+ A G + G W+KPGA+V+DVG +D L+GDV Y+ A + AS ITPVPGGVGPMT+A LL NTL +A++ Sbjct: 127 NVGRLAQR--IPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGT---------LVGDVQYDVAAQNASFITPVPGGVGPMTIASLLENTLYAAEQ 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_PROMM (Bifunctional protein folD OS=Prochlorococcus marinus (strain MIT 9313) GN=folD PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.112e-30 Identity = 76/162 (46.91%), Postives = 105/162 (64.81%), Query Frame = -1 Query: 169 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTL 654 LN+G L ++G EP CTP G + LL R + + K AVVIGRS +VG P +L+LQ +ATVS+ H+ T + +T +AD+++ AAG A ++ +KPGAVV+DVG + + + + RL GDV +E LAS +TPVPGGVGPMTV MLL NT+ Sbjct: 125 LNLGRL-LKG-EPGPRSCTPAGVMALLARHQISLERKRAVVIGRSILVGQPMALMLQAANATVSVAHSHTGDLASLTQQADVLVVAAGRARMIGAEHVKPGAVVVDVGIHRLPLDPELGTQAKARLCGDVRTQEVEPLASALTPVPGGVGPMTVTMLLVNTV 284
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BORA1 (Bifunctional protein folD OS=Bordetella avium (strain 197N) GN=folD PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.112e-30 Identity = 74/162 (45.68%), Postives = 102/162 (62.96%), Query Frame = -1 Query: 154 LAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 639 L M G +PLF PCTP G +++L GV + G AVV+G SNIVG P ++LL ATV+I ++ T++ T AD+++ A G ++ G +KPGAVV+DVG D +L GDV + A ++A ITPVPGGVGPMT+AML+ NTL +A+R Sbjct: 129 LLMTG-QPLFRPCTPYGVMKMLESEGVTLRGAEAVVVGASNIVGKPMAMLLLAAGATVTICNSKTRDLAAQTRRADVLVVATGRPRMITGDMIKPGAVVIDVGINRGDDG---------KLCGDVDFASAQQVAGAITPVPGGVGPMTIAMLMVNTLQAAER 280
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_AQUAE (Bifunctional protein folD OS=Aquifex aeolicus GN=folD PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.112e-30 Identity = 76/168 (45.24%), Postives = 104/168 (61.90%), Query Frame = -1 Query: 148 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 651 N+G L + E FIPCTP G LL G+++ GK+ ++G IVG P SLL+ +ATVS+ H TK+ ++ T EADI+I+A GV +L++ +K GAVV+DVG ++ +++GDV +E AS ITPVPGGVGPMTV LL NTL S KR + Sbjct: 126 NMGKLVAQ-IEDGFIPCTPLGIDILLKHYGIDVKGKDVTIVGAGFIVGRPLSLLMLWRNATVSVCHIHTKDVKKFTKEADILISATGVPHLIKEDMIKEGAVVVDVGISRLN----------GKIVGDVDFERVKEKASAITPVPGGVGPMTVTALLLNTLKSYKRKF 282
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD2_DESHY (Bifunctional protein folD 2 OS=Desulfitobacterium hafniense (strain Y51) GN=folD2 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.112e-30 Identity = 68/155 (43.87%), Postives = 99/155 (63.87%), Query Frame = -1 Query: 169 MRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTL 633 + G E LF P TP+ CIE+++RSGVEI GK+ V++GR VG P L+ +H+ATV+I H+ T + T +ADI++AA G A LV+ +KPGA+V+D G + + GDV +EE +AS+I+PVPGGVG +T A+++ N L Sbjct: 130 LSGEEGLF-PATPESCIEIMLRSGVEIAGKHVVIVGRGETVGKPLVFLILKHNATVTICHSRTPDLGAFTRQADIIVAAVGKAKLVKKDMVKPGAIVVDAGINEIPGGI----------CGDVDFEEVKEVASLISPVPGGVGSLTTALIMKNVL 273
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_STRMU (Bifunctional protein folD OS=Streptococcus mutans GN=folD PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.452e-30 Identity = 74/168 (44.05%), Postives = 108/168 (64.29%), Query Frame = -1 Query: 151 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 654 +N G+L GR + +PCTP G +E+L V++ GK+AV+IGRSNIVG P + LL +ATV++ H+ TK+ ++T AD++I A G N V ++K GAVV+DVG + + +L+GDV ++ + AS+ITPVPGGVGPMT+ MLL T +A R+ Sbjct: 125 MNTGHL-WSGRS-MMVPCTPAGIMEMLSAYHVDLEGKHAVIIGRSNIVGKPMAQLLLEKNATVTLTHSRTKHLSEVTRCADVLIVAIGQGNFVTEEFVKEGAVVIDVGM---------NRDKNGKLIGDVNFDHVAQKASLITPVPGGVGPMTITMLLEQTYQAALRS 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_RICBR (Bifunctional protein folD OS=Rickettsia bellii (strain RML369-C) GN=folD PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.452e-30 Identity = 70/166 (42.17%), Postives = 103/166 (62.05%), Query Frame = -1 Query: 157 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 654 LN+G L G + F+PCT GC+E++ + + GKNA+++GRSNIVG P S LL + + +V+I H+ ++N ITS+ADIV+AA G + + KP A+V+DVG + G +++GDV +E ITPVPGG+GPMT+A LL NT+ + K Sbjct: 125 LNVGYLHS-GIDNGFVPCTALGCLEVIKKHEPNLSGKNAIIVGRSNIVGKPLSALLLKENCSVTICHSKSQNLSSITSKADIVVAAIGSPLKLTSGYFKPDAIVIDVGINRIG---------GNKIVGDVDFENVKSKVKYITPVPGGIGPMTIAFLLKNTVQAFK 280
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_RICB8 (Bifunctional protein folD OS=Rickettsia bellii (strain OSU 85-389) GN=folD PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.452e-30 Identity = 70/166 (42.17%), Postives = 103/166 (62.05%), Query Frame = -1 Query: 157 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 654 LN+G L G + F+PCT GC+E++ + + GKNA+++GRSNIVG P S LL + + +V+I H+ ++N ITS+ADIV+AA G + + KP A+V+DVG + G +++GDV +E ITPVPGG+GPMT+A LL NT+ + K Sbjct: 125 LNVGYLHS-GIDNGFVPCTSLGCLEVIKKHEPNLSGKNAIIVGRSNIVGKPLSALLLKENCSVTICHSKSQNLSSITSKADIVVAAIGSPLKLTSGYFKPDAIVIDVGINRIG---------GNKIVGDVDFENVKSKVKYITPVPGGIGPMTIAFLLKNTVQAFK 280
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_LACLA (Bifunctional protein folD OS=Lactococcus lactis subsp. lactis GN=folD PE=3 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.452e-30 Identity = 74/167 (44.31%), Postives = 104/167 (62.28%), Query Frame = -1 Query: 154 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 654 +N+G L PL IP TP G +E+ VE+ GK AVVIGRSNIVG P + LL ATV+I H+ T+N ++T EAD+++ A G +++ +K GAVV+DVG + + +L GDV ++E +AS+ITPVPGGVGPMT+ ML+ T+ +A R Sbjct: 123 MNMGRLW--SGNPLMIPSTPAGIMEMFREYDVELSGKRAVVIGRSNIVGKPMAQLLMMADATVTIAHSKTENLRELTKEADVLVVAIGRDRMIKAEDVKEGAVVIDVGM---------NRDEDGKLHGDVDFDEVKDVASLITPVPGGVGPMTITMLMEQTVRAASR 278
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_IDILO (Bifunctional protein folD OS=Idiomarina loihiensis GN=folD PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.452e-30 Identity = 77/163 (47.24%), Postives = 95/163 (58.28%), Query Frame = -1 Query: 163 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 651 NIG L+ R P PCTPKG + LL + V++ G NAVV+G SNIVG P SL L AT ++ H TK+ ADIV+ A G A + G W+KPGA+V+DVG + RL GDV + A A ITPVPGGVGPMTVA L+ NTL + Sbjct: 127 NIGRLSQR--IPALRPCTPKGIMTLLEHTHVDLHGLNAVVVGASNIVGRPMSLELLLAGATTTVCHRFTKDLSDHVKRADIVVVAVGKAEFIPGEWIKPGAIVIDVGMNRLPDG---------RLTGDVEFSVAAERAGWITPVPGGVGPMTVASLIENTLQA 278 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |