CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BRUSU (Bifunctional protein folD OS=Brucella suis GN=folD PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.153e-36 Identity = 84/174 (48.28%), Postives = 115/174 (66.09%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG---YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N+G L E F+PCTP G + ++ R G ++ G NAVVIGRSNIVG P LL +ATV++ H+ TK+ I ADI++AA G +V+G W+KPGA V+DVG ++ P+ E G RL+GDV + EA ++A ITPVPGGVGPMT+AML++NTL +A R+ G Sbjct: 125 INVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVG-----INRIPAPERGEGKTRLVGDVDFAEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACRSAG 293
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BRUSI (Bifunctional protein folD OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=folD PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.153e-36 Identity = 84/174 (48.28%), Postives = 115/174 (66.09%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG---YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N+G L E F+PCTP G + ++ R G ++ G NAVVIGRSNIVG P LL +ATV++ H+ TK+ I ADI++AA G +V+G W+KPGA V+DVG ++ P+ E G RL+GDV + EA ++A ITPVPGGVGPMT+AML++NTL +A R+ G Sbjct: 125 INVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVG-----INRIPAPERGEGKTRLVGDVDFAEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACRSAG 293
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BRUO2 (Bifunctional protein folD OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=folD PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.153e-36 Identity = 84/174 (48.28%), Postives = 115/174 (66.09%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG---YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N+G L E F+PCTP G + ++ R G ++ G NAVVIGRSNIVG P LL +ATV++ H+ TK+ I ADI++AA G +V+G W+KPGA V+DVG ++ P+ E G RL+GDV + EA ++A ITPVPGGVGPMT+AML++NTL +A R+ G Sbjct: 125 INVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVG-----INRIPAPERGEGKTRLVGDVDFAEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACRSAG 293
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BRUME (Bifunctional protein folD OS=Brucella melitensis GN=folD PE=3 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 5.153e-36 Identity = 84/174 (48.28%), Postives = 115/174 (66.09%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG---YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N+G L E F+PCTP G + ++ R G ++ G NAVVIGRSNIVG P LL +ATV++ H+ TK+ I ADI++AA G +V+G W+KPGA V+DVG ++ P+ E G RL+GDV + EA ++A ITPVPGGVGPMT+AML++NTL +A R+ G Sbjct: 125 INVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVG-----INRIPAPERGEGKTRLVGDVDFAEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACRSAG 293
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BRUMB (Bifunctional protein folD OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=folD PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.153e-36 Identity = 84/174 (48.28%), Postives = 115/174 (66.09%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG---YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N+G L E F+PCTP G + ++ R G ++ G NAVVIGRSNIVG P LL +ATV++ H+ TK+ I ADI++AA G +V+G W+KPGA V+DVG ++ P+ E G RL+GDV + EA ++A ITPVPGGVGPMT+AML++NTL +A R+ G Sbjct: 125 INVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVG-----INRIPAPERGEGKTRLVGDVDFAEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACRSAG 293
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BRUC2 (Bifunctional protein folD OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=folD PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.153e-36 Identity = 84/174 (48.28%), Postives = 115/174 (66.09%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG---YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N+G L E F+PCTP G + ++ R G ++ G NAVVIGRSNIVG P LL +ATV++ H+ TK+ I ADI++AA G +V+G W+KPGA V+DVG ++ P+ E G RL+GDV + EA ++A ITPVPGGVGPMT+AML++NTL +A R+ G Sbjct: 125 INVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVG-----INRIPAPERGEGKTRLVGDVDFAEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACRSAG 293
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BRUAB (Bifunctional protein folD OS=Brucella abortus GN=folD PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.153e-36 Identity = 84/174 (48.28%), Postives = 115/174 (66.09%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG---YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N+G L E F+PCTP G + ++ R G ++ G NAVVIGRSNIVG P LL +ATV++ H+ TK+ I ADI++AA G +V+G W+KPGA V+DVG ++ P+ E G RL+GDV + EA ++A ITPVPGGVGPMT+AML++NTL +A R+ G Sbjct: 125 INVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVG-----INRIPAPERGEGKTRLVGDVDFAEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACRSAG 293
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BRUA2 (Bifunctional protein folD OS=Brucella abortus (strain 2308) GN=folD PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.153e-36 Identity = 84/174 (48.28%), Postives = 115/174 (66.09%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG---YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N+G L E F+PCTP G + ++ R G ++ G NAVVIGRSNIVG P LL +ATV++ H+ TK+ I ADI++AA G +V+G W+KPGA V+DVG ++ P+ E G RL+GDV + EA ++A ITPVPGGVGPMT+AML++NTL +A R+ G Sbjct: 125 INVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVG-----INRIPAPERGEGKTRLVGDVDFAEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACRSAG 293
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BRUA1 (Bifunctional protein folD OS=Brucella abortus (strain S19) GN=folD PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.153e-36 Identity = 84/174 (48.28%), Postives = 115/174 (66.09%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG---YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N+G L E F+PCTP G + ++ R G ++ G NAVVIGRSNIVG P LL +ATV++ H+ TK+ I ADI++AA G +V+G W+KPGA V+DVG ++ P+ E G RL+GDV + EA ++A ITPVPGGVGPMT+AML++NTL +A R+ G Sbjct: 125 INVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVG-----INRIPAPERGEGKTRLVGDVDFAEAEKVAGAITPVPGGVGPMTIAMLMANTLTAACRSAG 293
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD3_PSEMY (Bifunctional protein folD 3 OS=Pseudomonas mendocina (strain ymp) GN=folD3 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.729e-36 Identity = 85/166 (51.20%), Postives = 113/166 (68.07%), Query Frame = -1 Query: 157 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG-YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 651 N+G L+ +GRE L PCTP GC+ LL S ++ GK+AVVIGRSNIVG P + LL + H +V++VH+ + N + + +ADIV+AA G LV WLKPGAVV+DVG +D E G RL+GDV ++ A+ S ITPVPGGVGPMT+A L+ NTL +A+ Sbjct: 130 NVGGLS-QGREVL-TPCTPAGCLRLLQDSCGDLTGKHAVVIGRSNIVGKPMAALLLKAHCSVTVVHSKSANLKTLCRQADIVVAAVGRPRLVDADWLKPGAVVIDVGINRID-------ENGRSRLVGDVDFDSALPQVSAITPVPGGVGPMTIAYLMKNTLVAAR 286 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |