CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_PROMS (Bifunctional protein folD OS=Prochlorococcus marinus (strain AS9601) GN=folD PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.225e-30 Identity = 78/172 (45.35%), Postives = 103/172 (59.88%), Query Frame = -1 Query: 139 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 654 +NIG L EP CTP G I LL + I GK VVIGRS +VG P SL+L + TV++ H+ T N ++ EADI+IAAAG NL+ S++K GAV++DVG + S + RL GDV E+ + TPVPGGVGPMTV MLL NT+ S ++ +G + Sbjct: 125 INIGKLVKN--EPGMRSCTPAGIINLLRSQNITIEGKKIVVIGRSLLVGKPLSLMLLNLNGTVTMTHSKTLNLNKVCREADILIAAAGKPNLIDSSFVKEGAVIIDVGI----HRLKSSDKNQTRLCGDVLLEDVISKVFAYTPVPGGVGPMTVTMLLVNTIFSWQKQFGLS 290
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_NITMU (Bifunctional protein folD OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=folD PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.225e-30 Identity = 71/156 (45.51%), Postives = 101/156 (64.74%), Query Frame = -1 Query: 148 LFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 615 +F PCTP G +++L + + I G++AV++GRSNIVG P +L+L + ATV+I + T+N + TS ADI+I AAG L+ +KPGA V+DVG + +L GDV +E A ITPVPGGVGPMT+AMLL NT+ +A++A+ Sbjct: 136 IFPPCTPNGVMKMLEKYDIPIEGQHAVIVGRSNIVGKPMALMLLQKGATVTICTSRTRNLAEHTSRADILIVAAGKPRLITAMMVKPGATVIDVGINRLSDG---------KLAGDVDFESVKEKAGYITPVPGGVGPMTIAMLLCNTVVAAEQAH 282
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_NEOSM (Bifunctional protein folD OS=Neorickettsia sennetsu (strain Miyayama) GN=folD PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.225e-30 Identity = 70/162 (43.21%), Postives = 106/162 (65.43%), Query Frame = -1 Query: 169 NIGNLAMRGREPLFIPCTPKGCIELLIRS-GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTL 651 N+G LA+ ++ L PCTP G + L+ + G + G +AVVIGRSNIVG P ++LL + T+++ H+ T+N ++ T +ADIVI+A G+ + V+ ++KPGA V+DVG VD +L+GDV +E+ ++ ITPVP GVGPMT+A L+ NT+ Sbjct: 126 NVGRLAL-SKDALLKPCTPAGSLYLIKSALGDNLSGMDAVVIGRSNIVGKPMAMLLLHENCTITLTHSKTRNIQEKTRQADIVISAVGIPHFVKKDFIKPGATVIDVGMNKVD----------GKLVGDVDFEDVLQKVKFITPVPRGVGPMTIAFLMLNTV 276
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_LEIXX (Bifunctional protein folD OS=Leifsonia xyli subsp. xyli GN=folD PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.225e-30 Identity = 77/171 (45.03%), Postives = 109/171 (63.74%), Query Frame = -1 Query: 151 NIGNLAMRGREPLF--IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 651 N+G L + P+ +PCTP+G IEL++R G+++ GK+ VV+GR VG LL R +ATV++ H TK+ ++ AD+++AAAGV LV +KPGA+VLDVG V+ DP R+ GDV + A +AS I+P PGGVGPMT A+LL N ++SA+RA Sbjct: 126 NLGRLVLNVNRPITTPLPCTPRGVIELMLRHGIDLAGKDVVVVGRGVTVGRSIGALLTRREVNATVTLTHTGTKSLDEHLRSADVIVAAAGVPGLVSAENVKPGAIVLDVGVSRVE---DPETGKS-RVAGDVAADVA-GVASWISPNPGGVGPMTRALLLQNVVESAERA 291
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_CLOAB (Bifunctional protein folD OS=Clostridium acetobutylicum GN=folD PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.225e-30 Identity = 69/155 (44.52%), Postives = 98/155 (63.23%), Query Frame = -1 Query: 157 EPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 621 E FIPCTP+ I L+ V+I GKNAVVIGRSNIVG PT+ LL +ATV+I H+ T+N + I +ADI+++A G + ++ ++V+DVGT VD +L GDV ++E ++ A+ +TPVPGGVG MT ML+ N ++ K Sbjct: 134 EKSFIPCTPRSIINLIKSLNVDICGKNAVVIGRSNIVGKPTAQLLLNENATVTICHSRTQNLKDICKKADIIVSAIGRPGFITDEFVNEKSIVIDVGTTVVD----------GKLRGDVVFDEVIKKAAYVTPVPGGVGAMTTTMLILNVCEALK 278
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_CHLCV (Bifunctional protein folD OS=Chlamydophila caviae GN=folD PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.225e-30 Identity = 73/172 (42.44%), Postives = 111/172 (64.53%), Query Frame = -1 Query: 151 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLP-TSLLLQRH---HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 654 +N+G L + G+ F PCTP G IELL + + G++ V+GRSNIVG P ++L+Q+H +ATV+++H+ ++N +I ADI+IAA GV ++ + + A+V+DVGT V + D GY L+GDV + + ++PVPGGVGPMTVAML+ NT +S K++ Sbjct: 119 INMGKLLL-GQLGGFAPCTPAGIIELLHYYEIPLHGRHVAVVGRSNIVGKPLAAMLMQKHPSTNATVTLLHSQSENLTEILKTADIIIAAVGVPLFIKETMISSHAIVVDVGTSRVAANNDK----GYTLVGDVDFNNVVAKCKAVSPVPGGVGPMTVAMLMKNTWESYKKS 285
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_SALTY (Bifunctional protein folD OS=Salmonella typhimurium GN=folD PE=3 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 5.518e-30 Identity = 71/163 (43.56%), Postives = 95/163 (58.28%), Query Frame = -1 Query: 163 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 651 N+G L R P PCTP+G + LL R ++ G NAVVIG SNIVG P S+ L T ++ H TK+ AD++I A G + G W+K GA+V+DVG ++ +++GDV ++EA AS ITPVPGGVGPMTVA L+ NTL + Sbjct: 127 NVGRLCQRA--PRLRPCTPRGIVTLLERYNIDTYGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKDLRHHVEHADLLIVAVGKPGFIPGEWIKEGAIVIDVGINRLE---------NGKVVGDVVFDEAAARASYITPVPGGVGPMTVATLIENTLQA 278
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_SALTI (Bifunctional protein folD OS=Salmonella typhi GN=folD PE=3 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 5.518e-30 Identity = 71/163 (43.56%), Postives = 95/163 (58.28%), Query Frame = -1 Query: 163 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 651 N+G L R P PCTP+G + LL R ++ G NAVVIG SNIVG P S+ L T ++ H TK+ AD++I A G + G W+K GA+V+DVG ++ +++GDV ++EA AS ITPVPGGVGPMTVA L+ NTL + Sbjct: 127 NVGRLCQRA--PRLRPCTPRGIVTLLERYNIDTYGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKDLRHHVEHADLLIVAVGKPGFIPGEWIKEGAIVIDVGINRLE---------NGKVVGDVVFDEAAARASYITPVPGGVGPMTVATLIENTLQA 278
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_SALSV (Bifunctional protein folD OS=Salmonella schwarzengrund (strain CVM19633) GN=folD PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.518e-30 Identity = 71/163 (43.56%), Postives = 95/163 (58.28%), Query Frame = -1 Query: 163 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 651 N+G L R P PCTP+G + LL R ++ G NAVVIG SNIVG P S+ L T ++ H TK+ AD++I A G + G W+K GA+V+DVG ++ +++GDV ++EA AS ITPVPGGVGPMTVA L+ NTL + Sbjct: 127 NVGRLCQRA--PRLRPCTPRGIVTLLERYNIDTYGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKDLRHHVEHADLLIVAVGKPGFIPGEWIKEGAIVIDVGINRLE---------NGKVVGDVVFDEAAARASYITPVPGGVGPMTVATLIENTLQA 278
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_SALPK (Bifunctional protein folD OS=Salmonella paratyphi A (strain AKU_12601) GN=folD PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.518e-30 Identity = 71/163 (43.56%), Postives = 95/163 (58.28%), Query Frame = -1 Query: 163 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 651 N+G L R P PCTP+G + LL R ++ G NAVVIG SNIVG P S+ L T ++ H TK+ AD++I A G + G W+K GA+V+DVG ++ +++GDV ++EA AS ITPVPGGVGPMTVA L+ NTL + Sbjct: 127 NVGRLCQRA--PRLRPCTPRGIVTLLERYNIDTYGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKDLRHHVEHADLLIVAVGKPGFIPGEWIKEGAIVIDVGINRLE---------NGKVVGDVVFDEAAARASYITPVPGGVGPMTVATLIENTLQA 278 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |