CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_VEREI (Bifunctional protein folD OS=Verminephrobacter eiseniae (strain EF01-2) GN=folD PE=3 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 7.206e-30 Identity = 68/154 (44.16%), Postives = 102/154 (66.23%), Query Frame = -1 Query: 151 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 612 F PCTP GC++L+ +G I G++AV++GRS VG P +LLL + +ATV++ H+ T + T +ADIV+AA G A ++ +KPGA+V+DVG ++ D +L GDV ++ ++A ITPVPGGVGPMT+ MLL NT+ + +R+ Sbjct: 137 FRPCTPYGCMKLIESTGQAIAGRHAVIVGRSQTVGKPMALLLLQANATVTLCHSATPDLGYHTRQADIVVAAVGRARMLTAEMVKPGAIVIDVG---INRQADG------KLCGDVDFDRVKQVAGWITPVPGGVGPMTITMLLVNTMQATERS 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_RHOS4 (Bifunctional protein folD OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=folD PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.206e-30 Identity = 73/169 (43.20%), Postives = 102/169 (60.36%), Query Frame = -1 Query: 145 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 651 N+G L + +PCTP GC+ +L + G NAVV+GRSNIVG P + LL TV+I H+ T++ + ADI++AA G ++ G ++KPGA V+DVG ++ + +L+GDV Y A +A ITPVPGGVGPMT+A LL+NTL + RA G Sbjct: 127 NVGRLGTGQKS--MVPCTPLGCLMMLRDHLGALSGLNAVVVGRSNIVGKPMAQLLLGESCTVTIAHSRTRDLAAVCRGADILVAAVGRPEMITGDFVKPGATVIDVGINRIE------RDGKTKLVGDVDYASAAEVAGAITPVPGGVGPMTIACLLANTLTACCRANG 287
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_RHOS1 (Bifunctional protein folD OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=folD PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.206e-30 Identity = 73/169 (43.20%), Postives = 102/169 (60.36%), Query Frame = -1 Query: 145 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 651 N+G L + +PCTP GC+ +L + G NAVV+GRSNIVG P + LL TV+I H+ T++ + ADI++AA G ++ G ++KPGA V+DVG ++ + +L+GDV Y A +A ITPVPGGVGPMT+A LL+NTL + RA G Sbjct: 127 NVGRLGTGQKS--MVPCTPLGCLMMLRDHLGTLSGLNAVVVGRSNIVGKPMAQLLLGESCTVTIAHSRTRDLAAVCRGADILVAAVGRPEMITGDFVKPGATVIDVGINRIE------RDGKTKLVGDVDYASAAEVAGAITPVPGGVGPMTIACLLANTLTACCRANG 287
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_RHOPT (Bifunctional protein folD OS=Rhodopseudomonas palustris (strain TIE-1) GN=folD PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.206e-30 Identity = 72/155 (46.45%), Postives = 98/155 (63.23%), Query Frame = -1 Query: 145 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGY-RLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 606 PCTP G I + + G NA+VIGRSN+VG P LL +ATV+I H+ T++ + +AD+V AA G A +V+G W+KPGA V+DVG ++ P + G +L+GDV + EA +A ITPVPGGVG MTVA LL NT+ +A +G Sbjct: 140 PCTPLGSIIMAKTVHASLEGMNALVIGRSNLVGKPLVQLLLNENATVTIAHSRTRDLPALCRQADLVFAAVGKAEMVKGDWIKPGATVIDVG-----INRTPGKDGGKDKLLGDVAFAEAKEVAGAITPVPGGVGLMTVACLLVNTVRAACAIHG 289
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_RHOPA (Bifunctional protein folD OS=Rhodopseudomonas palustris GN=folD PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.206e-30 Identity = 72/155 (46.45%), Postives = 98/155 (63.23%), Query Frame = -1 Query: 145 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGY-RLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 606 PCTP G I + + G NA+VIGRSN+VG P LL +ATV+I H+ T++ + +AD+V AA G A +V+G W+KPGA V+DVG ++ P + G +L+GDV + EA +A ITPVPGGVG MTVA LL NT+ +A +G Sbjct: 140 PCTPLGSIIMAKTVHASLEGMNALVIGRSNLVGKPLVQLLLNENATVTIAHSRTRDLPALCRQADLVFAAVGKAEMVKGDWIKPGATVIDVG-----INRTPGKDGGKDKLLGDVAFAEAKEVAGAITPVPGGVGLMTVACLLVNTVRAACAIHG 289
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_PROMH (Bifunctional protein folD OS=Proteus mirabilis (strain HI4320) GN=folD PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.206e-30 Identity = 71/165 (43.03%), Postives = 97/165 (58.79%), Query Frame = -1 Query: 157 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 651 NIG L R P PCTP+G + LL R + + G NAV+IG SNIVG P SL L T ++ H TK+ AD+V+ A G N + G W+KPGA+V+DVG ++ +++GDV + +A + A I+PVPGGVGPMTVA L+ NTL + + Sbjct: 127 NIGRLCQRA--PKLRPCTPRGIVTLLERCNIPMNGLNAVIIGASNIVGRPMSLELLLAGCTTTVTHRFTKDLRFHVEHADLVVVAVGKPNFIPGEWIKPGAIVIDVGINRLE---------NGKVVGDVDFAQASQRAGWISPVPGGVGPMTVATLIQNTLQACE 280
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_PROM9 (Bifunctional protein folD OS=Prochlorococcus marinus (strain MIT 9312) GN=folD PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.206e-30 Identity = 77/172 (44.77%), Postives = 103/172 (59.88%), Query Frame = -1 Query: 139 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 654 +NIG L EP CTP G I LL + I GK VVIGRS +VG P SL+L + TV++ H+ T + ++ EADI+IAAAG NL+ S++K GAV++DVG + S + RL GDV E+ + TPVPGGVGPMTV MLL NT+ S ++ +G + Sbjct: 125 INIGKLVKN--EPAMRSCTPAGIINLLRSQNITIEGKKIVVIGRSLLVGKPLSLMLLNLNGTVTMTHSKTLDLNKVCKEADILIAAAGKPNLIDSSFVKEGAVIIDVGI----HRLKSSDKNKTRLCGDVLLEDVIPKVLAYTPVPGGVGPMTVTMLLVNTIFSWQKQFGLS 290
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_NOSP7 (Bifunctional protein folD OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=folD PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.206e-30 Identity = 80/168 (47.62%), Postives = 104/168 (61.90%), Query Frame = -1 Query: 151 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 654 +N+G L +RG L CTP G + LL + + GK AVV+GRS +VG P +L+L ATV+I H+ + + + IT ADI+IAAAG L+ +KPGAVV+DVG V + S RL+GDV +E +A ITPVPGGVGPMTVA+LL NT S RA Sbjct: 129 VNLGRL-VRGEIGLR-SCTPDGVMRLLQEYEIPLQGKQAVVVGRSILVGKPMALMLLEADATVTIAHSRSHDLKSITQNADILIAAAGRPGLITADMVKPGAVVVDVGMNRVTDASGKS-----RLIGDVDFESTAGVAGFITPVPGGVGPMTVAILLQNTFTSYSRA 289
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_EXISA (Bifunctional protein folD OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=folD PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.206e-30 Identity = 76/166 (45.78%), Postives = 102/166 (61.45%), Query Frame = -1 Query: 154 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 651 N+G + M G + L +PCTP G + L ++ EI GK+ VV+GRS IVG P +L ATV+ H+ T + ++T +ADI+I A G A LV +KPGA+V+DVG V+ RL+GDV YE AS ITPVPGGVGPMT+ ML+ NT++ A R Sbjct: 125 NVGKM-MLGLDTL-LPCTPHGILHLA-KTQTEIAGKHVVVVGRSQIVGKPVGMLFLNESATVTYCHSKTADLGEMTRQADILIVAVGRAGLVTSDMVKPGALVIDVGVNRVE----------GRLVGDVDYEAVKEKASAITPVPGGVGPMTITMLMHNTVEVASR 277
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ALISL (Bifunctional protein folD OS=Aliivibrio salmonicida (strain LFI1238) GN=folD PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.206e-30 Identity = 74/161 (45.96%), Postives = 96/161 (59.63%), Query Frame = -1 Query: 169 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTL 651 N+G L+ R P CTPKG I LL R +++ G +AVV+G SNIVG P +L L T + H TK+ E +AD+V+ A G N + G W+K GAVV+DVG +D +L+GDV ++ A AS ITPVPGGVGPMTVA L+ NTL Sbjct: 127 NVGRLSQR--IPKLRSCTPKGIITLLDRYNIQVRGMHAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKDLEHHIRQADLVVVAVGKPNFIPGEWIKEGAVVVDVGINRLDTG---------KLIGDVEFDVAKTKASYITPVPGGVGPMTVASLIENTL 276 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |